si:dkey-21c1.1 (tepsin,si:dkey-21c1.1,LOC107601406,LOC107755426,LOC107684135,LOC107749856,LOC107601412,LOC107581605,LOC107749858)


Basic Information

Item Value
gene id si:dkey-21c1.1
gene name tepsin,si:dkey-21c1.1,LOC107601406,LOC107755426,LOC107684135,LOC107749856,LOC107601412,LOC107581605,LOC107749858
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 15300297 ~ 15306509 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU131171
agagagagggagagcgagcgagagagagagagaatgagatcCGGCGAGATGGATATGTTGTAACTTCAGAAAATGACTGAACTCAAGATCCATTTGTGAACAGACAGAGGGGGAAAATCTTGACAGATCCCTTCGTTTTGCTGAAAGGGAAGCCGGTGGTCTCTGAGACTGAGAGGTGCTGTGTGCCCTTATTTGGCTGTCAAATGCACAGATACGACATGTTGACAGAAAGCAGGAAACGCAGACGCAGCTGTGATGCCGAGGAGCTTCAGGTTTTGCCCCAGGCAAAGAGGTCTGGAGGTTATTCCTTTCTCCCTGAGGTTGGCCGTGATGTCTGGGACTCTGAGTCTTCCAGCAGTGACAGCAGTGGGATCAGCAGTCCGGAGCGGATGGCAGGAGCCACTTCCAACATTCAGAAGACTGACCAAAGAGGACTGCATGCATCCCAGGCTCCCTGCAGCCCTATTGCCCCCAACATCTCAGCAGAAGAGCCGGCCGTCTCCTTGAGCCACAGCCTCTCATACGATCACATCAACCGTATCCTAAGGGAGGCCCACTTCAGTAGCCTGCAAACTCGTGGTCACCAAGGGCCGACATGATCTACAATGACTCTTCCAGCACCCGTCGGCGTTAAGGAACAATGTACAGGGGACCTTTTAGAGGGACATTATGCGCCACTTGAAGGCCTAGCACAAATACAAACCCTCTAAATGCATTTGTCTTCTTTCTTATAGCACTTTTTCATGTTCATAGTGTTTATGTGGGGCTCTACTTGATGTATCGACCATGAACTTCACATAGGtgctatatatctatatatataaagaaatatctTGAAAATTGTCAAGTTCTTGCAAGATTATGTAAGCTTTCGCCCTTTACTAGACAGTCACACATGGTGCTACTGCAGTTCTGGGCCACTTAGTCAGACGTGTGCATTTTGGCCAATTTTGACACTCTTTGGTCgatctgaaaaaaggaaaagaaatcaaataatttCCTGTATTTGAGAGCTGAAGAGTAGAAACCGTATGATTACAATGAAGCCCTGCTTTGGAGTCATTAATAATACTGTTGATGTGTTTACAAAAGATTCCGGTTTGGTTCTGACTGGAATTTAGACTCTTTCAGGAAGTTTTCGGGGCTTGATGATTGCTTACATATCCAAAACTCAGGTCTAGAGGATTTCTCTCTGCGTGCCATGAAGGTTCAGATTTTAAATGAGGAACTTGGTGCCAGAtccttaaattttttttttatatagtgtaGTCTCTCTTTACCTGGATTAAAAATGGATTGTTAGCACATCACACTGCAGAGAGACTCTTCTGAAAAATGCATGCTGGACTCAGGTCTGTTAATGTACGTAATGATGCACTCTTTCTCTATGAACTTAAAGGTGTAAACCAATGAATTATTGTGCAAATCCAGTCACTGCAAATTGAAAGCCATGTCCGATTTTTACACAACAATTTCCTGCTTTCATTTTACAATAATCAGAGTTTGAAATACACTAGTTTAGATCAGTCACTGTGCTCTGTGTAATACGAGGACTCTTCTTCTATGGGCAGACCAGGAATGACCTAAAATTAGCTTGCACCTAACTAAGCACTCTACAGTATCACGTCACTGCAAAATCCTAAATATTGTACCATAAAATAACCATACAGACCACTTATGCCTGTGTTCGTCAAATATACATGATGGTTTAATTCATTTCACAATGTTAACCCAAACAGGAATTGTAGTGCTCCTTAATTTAGTACAGTTCGGTCCATTTTAGACGTACATCCTTAACGAAATTTTAAAGCTTAGTCCAAACAGATTGTATGAGGACAGTTACATCATTTCAAGCGAGTGATCTTGTGTACTTTAAAATACTCGGTGCACAATACTGTACAACCCAGGCACTGTGCTTCGCGTGAAAGACTATTAGCTTTTGATGATGAAAACCGTCCCTGCGGTCAACATTGTTTTGTATGTAGGATTGTACATAATATATAGCTagcatatatacaatatttgaaatcattgttattttatgaATTGTTCCGCtggtgtaaataaaaataaagttttttaataTACGTATTCATTTCGTTTACTTCTGTTCCAGGCTCCGAATGGACATTTTTCTTACTCAGGCCtgcttttttataatgttttatacatttaaatacactttcaCCCAAGACGgttctttatatatttgcacAAAAGGTATACATTTGTTCGGTGGGACGTTTTTTGATCAAACTCAATGTGTTAAtgtttgttcttattttataatacacacAGGAAGACGTAAGTGCTTTTAGTAAGAGGAAAGACTGTAGTGCAAATAGTAGCAACCATTGCAGTAACACTCGTGTTTAACACCACAACAGAAAAGCATCCTGAGTTTTCTCAAATGTATCTTAATGAATTCAGAAGGAGCTGAAGAGACGTACCGTTACTGATCGTCGAGACTTGACTTGTTCCCAGCTTGAACTCTTATTGTGAACCACTAGCAGCATTAAGACAGTAAGAGTATGTTTGCCATTGCAGGTGGATGTTACCTTCATAATTACCGGTTAAGATTGTGACcacatttacatgcaaaatCATTtccgacaaaaaaaaaaaaaaaaaacttcctcaCAGCAACTGGAATATTCCTGTAATCAGCATATAAACTAagacatgcatgtttttttctgcattccCTGATGGAAATACTGGAGATTTTTGAAATGATGAATAGTAATGACAAATATTCATAGCACAATGACACGAAAAATTCATAATACCTTTCGAAGGGTTTGGTAagatttttggggtttttgaatcactcttatgctcaccaaggcttcatttatttaaagaaaaaaatattatagaaatgtaaaataacccattttctattttaatatattttaaaatgtaatttattcctgtgatggcaaatctGAATAAATCTGAATTCGGCAGCCATAACTGCcataaaaacagttgtgctgcttaatatttttgtgcactttcatacatttttttaaagactctTTGATAAATAGAGGGTTTAAAATAACCGCTTTAATTAGAAATACAAatctttactgttatttttgatcagtttaatgcatcctctgTGAATTAACTGCttatttgttctctttttttttaacaaaaataaataataaataaaaatctaactCATCccaaacatttatacattagtGTAAgtcatgacattttaatgtttgtttaaaaaaaataaatctttcctATTTGCTTGAACATTGTTCACTCATAACTACATACAACAAACAGTTGATCTTCCTAATAAGGTGTTTACGTGACTCAACATTATGATTAATACATGCATAAgtcataatattgctttaatcAGGTCATGGAAAGACCAAGAATTTTCATGTGCATGTAAACGTGGTCACTTGCAGCaattataatatcattattagATTATGATTTAGCAATTTTCCCCAAAATCAGCACATAACGAAGCGTAAATGAATGTTGGCATCAGAGATTGAGGAAGGAGAAGGCAGAGAGTTGCTCACTAGATGTGTGTGAGCCTGCAGTTCTCTCACAGCTTTTCTCAATTGCACAGTCTGTGCCTGAAGTGGCTTCTACACTTATCTGGGCGTCTGACTCGACCGGAACAGGCTCGACCAAACATACAGGCTTGCTCCTGTTGACTAACTCCATTCCACTGAAGAGTGAGAGTCTGGGTGGCTCTGAGATCTTTTCTGTACTCCTGTACTCCCCCTCTTCTTGTTCTCTTTTCATATGAGACACAGGTGCAGTGCCGTTACCCTGTAGGTGTTGTGTACGCGAGGTCTCCTCTGATGGGATAACAGACGCTGCCTTTTCTCTCAGCTGTCCCGGAACAAAGGGGACGATTATAGATGCAGGAGGCTGATCTGAAAGCGAAGAGCTGGCAGAGGTTGGACGTCCAGAACGGTCACATTTGGAATTTGTTACACAACCAAGCAAGGCCTCAAAC
>XM_043254017.1
GATgggagactgagagagagagagggagagcgagcgagagagagagagaatgagatcCGGCGAGATGGATATGTTGTAACTTCAGAAAATGACTGAACTCAAGATCCATTTGTGAACAGACAGAGGGGGAAAATCTTGACAGATCCCTTCGTTTTGCTGAAAGGGAAGCCGGTGGTCTCTGAGACTGAGAGGTGCTGTGTGCCCTTATTTGGCTGTCAAATGCACAGATACGACATGTTGACAGAAAGCAGGAAACGCAGACGCAGCTGTGATGCCGAGGAGCTTCAGGTTTTGCCCCAGGCAAAGAGGTCTGGAGGTTATTCCTTTCTCCCTGAGGTTGGCCGTGATGTCTGGGACTCTGAGTCTTCCAGCAGTGACAGCAGTGGGATCAGCAGTCCGGAGCGGATGGCAGGAGCCACTTCCAACATTCAGAAGACTGACCAAAGAGGACTGCATGCATCCCAGGCTCCCTGCAGCCCTATTGCCCCCAACATCTCAGCAGAAGAGCCGGCCGTCTCCTTGAGCCACAGCCTCTCATACGATCACATCAACCGTATCCTAAGGGAGGCCCACTTCAGTAGCCTGCAAACTCGTGGTCACCAAGGGCCGACATGATCTACAATGACTCTTCCAGCACCCGTCGGCGTTAAGGAACAATGTACAGGGGACCTTTTAGAGGGACATTATGCGCCACTTGAAGGCCTAGCACAAATACAAACCCTCTAAATGCATTTGTCTTCTTTCTTATAGCACTTTTTCATGTTCATAGTGTTTATGTGGGGCTCTACTTGATGTATCGACCATGAACTTCACATAGGtgctatatatctatatatataaagaaatatctTGAAAATTGTCAAGTTCTTGCAAGATTATGTAAGCTTTCGCCCTTTACTAGACAGTCACACATGGTGCTACTGCAGTTCTGGGCCACTTAGTCAGACGTGTGCATTTTGGCCAATTTTGACACTCTTTGGTCgatctgaaaaaaggaaaagaaatcaaataatttCCTGTATTTGAGAGCTGAAGAGTAGAAACCGTATGATTACAATGAAGCCCTGCTTTGGAGTCATTAATAATACTGTTGATGTGTTTACAAAAGATTCCGGTTTGGTTCTGACTGGAATTTAGACTCTTTCAGGAAGTTTTCGGGGCTTGATGATTGCTTACATATCCAAAACTCAGGTCTAGAGGATTTCTCTCTGCGTGCCATGAAGGTTCAGATTTTAAATGAGGAACTTGGTGCCAGAtccttaaattttttttttatatagtgtaGTCTCTCTTTACCTGGATTAAAAATGGATTGTTAGCACATCACACTGCAGAGAGACTCTTCTGAAAAATGCATGCTGGACTCAGGTCTGTTAATGTACGTAATGATGCACTCTTTCTCTATGAACTTAAAGGTGTAAACCAATGAATTATTGTGCAAATCCAGTCACTGCAAATTGAAAGCCATGTCCGATTTTTACACAACAATTTCCTGCTTTCATTTTACAATAATCAGAGTTTGAAATACACTAGTTTAGATCAGTCACTGTGCTCTGTGTAATACGAGGACTCTTCTTCTATGGGCAGACCAGGAATGACCTAAAATTAGCTTGCACCTAACTAAGCACTCTACAGTATCACGTCACTGCAAAATCCTAAATATTGTACCATAAAATAACCATACAGACCACTTATGCCTGTGTTCGTCAAATATACATGATGGTTTAATTCATTTCACAATGTTAACCCAAACAGGAATTGTAGTGCTCCTTAATTTAGTACAGTTCGGTCCATTTTAGACGTACATCCTTAACGAAATTTTAAAGCTTAGTCCAAACAGATTGTATGAGGACAGTTACATCATTTCAAGCGAGTGATCTTGTGTACTTTAAAATACTCGGTGCACAATACTGTACAACCCAGGCACTGTGCTTCGCGTGAAAGACTATTAGCTTTTGATGATGAAAACCGTCCCTGCGGTCAACATTGTTTTGTATGTAGGATTGTACATAATATATAGCTagcatatatacaatatttgaaatcattgttattttatgaATTGTTCCGCtggtgtaaataaaaataaagttttttaataT

Function

symbol description
tepsin Orthologous to human TEPSIN (TEPSIN adaptor related protein complex 4 accessory protein).
si:dkey-21c1.1 Orthologous to human FAM104A (family with sequence similarity 104 member A).

NR:

description
PREDICTED: protein FAM104A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131171 True 4006 TUCP 0.39 4 15300297 15306493
XM_043254017.1 False 2102 mRNA 0.42 4 15302217 15306509

Neighbor

gene id symbol gene type direction distance location
bahcc1b bahcc1,LOC107581601,LOC107684084 coding downstream 60454 15144089 ~ 15239843 (-)
fscn2b fscn2,fscn2b,LOC107722237,LOC107684083,LOC107581600 coding downstream 196922 15093081 ~ 15103375 (-)
birc5a birc5a,birc5,LOC107684154,LOC107581679,LOC107722191,LOC107690959,LOC107755428 coding downstream 208149 15090133 ~ 15092148 (-)
tmem235b si:ch73-369d14.2,LOC107690958,LOC107601440,LOC107755429,LOC107722204,LOC107684153,LOC107581678 coding downstream 210318 15083542 ~ 15089979 (-)
LOC122355486 pgs1,LOC107755482,LOC107690911,LOC107722233,LOC107684081,LOC107601408 coding downstream 265033 15016630 ~ 15035264 (-)
LOC122355463 LOC107601405,LOC107690951,LOC107749862,LOC107755467,LOC107561823,LOC107684094,LOC798089 coding upstream 83033 15389542 ~ 15398708 (-)
si:dkey-21e13.3 si:dkey-21e13.3,LOC107690929,LOC107601429,LOC107755471,LOC107684092,LOC107561857,LOC107749851,LOC107755473 coding upstream 102071 15408580 ~ 15411996 (-)
si:ch73-127m5.2 LOC107755466,LOC107561855,LOC107601426,LOC107749848,LOC107684095,LOC107690931 coding upstream 106130 15412639 ~ 15415969 (-)
LOC122355717 NA coding upstream 134254 15440763 ~ 15443134 (-)
LOC122355190 nog,nog3,LOC107702438,LOC107566874,LOC107722200,LOC107684148,LOC107581671 coding upstream 331515 15638024 ~ 15639764 (-)
G88635 NA non-coding downstream 52340 15246535 ~ 15247957 (-)
LOC122355054 NA non-coding downstream 182990 15114079 ~ 15117307 (-)
G88605 cyth2,cyth1,LOC103381773,LOC107717468,LOC100709795 non-coding downstream 287146 15010923 ~ 15013151 (-)
G88603 NA non-coding downstream 290739 15008498 ~ 15009558 (-)
G88403 fasn,LOC107702482,LOC107579490 non-coding downstream 579063 14720515 ~ 14721234 (-)
G88648 LOC107755474,LOC107690923,LOC107601434,LOC107684155,LOC107749866,LOC107581680 non-coding upstream 14018 15320527 ~ 15321751 (-)
G88659 NA non-coding upstream 30401 15336910 ~ 15337481 (-)
G88665 NA non-coding upstream 75025 15381534 ~ 15381909 (-)
G88694 NA non-coding upstream 205547 15512056 ~ 15774041 (-)
G88700 NA non-coding upstream 262523 15569032 ~ 15570009 (-)
ndufaf8 NA other downstream 5057 15293833 ~ 15295240 (-)
LOC122355209 NA other downstream 594046 14702568 ~ 14706251 (-)
G88365 NA other downstream 656517 14541566 ~ 14643780 (-)
G88250 LOC107702476 other downstream 1150292 14148047 ~ 14150005 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other downstream 1323786 13972882 ~ 13976511 (-)
bicral gltscr1l,LOC107690921,LOC107601433,LOC107749855,LOC107684087,LOC107581606 other upstream 4060 15310569 ~ 15319858 (-)
pmp22b pmp22,LOC107561836,LOC107684480,LOC107597829,LOC107692454,LOC107753252 other upstream 1293386 16599895 ~ 16609807 (-)
G88940 sdk2,sdk2b,LOC107721024,LOC107753272,LOC107597834 other upstream 1409910 16716419 ~ 16719298 (-)
G88941 sdk2,sdk2b,LOC107692460,LOC107574310,LOC107753272 other upstream 1415182 16721691 ~ 16722638 (-)
G89025 si:dkey-239b22.1,LOC107684476,LOC107561407,LOC107718529,LOC107740842 other upstream 2017252 17323761 ~ 17331226 (-)

Expression


Co-expression Network