G88734


Basic Information

Item Value
gene id G88734
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 15990693 ~ 15994265 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU131365
tgttttcttcatttttcgaaaacacagatattaaaatcaaaatacaggATGTGggtaaaataatcaaattaagaGCTACACGTTAAAGGGTacaattaaattacttaaacacgcaaacatgcaaaaaaacaaaaaccttattaAAACTATGAAGAGGGAAAGAAGAAGTGATCTCAGACtttaattaagtaataaaaGTAGTGTTTTTTCAGACCACAGTTACAAAAGGCCAGTAAAATGGCGACCGGCGCTTGGCTATTAAACACTACGCTCACAAAAGAACGGTTCATTGGCACGAGTGGGAATGAGAAACTCTGGCCATGCCAACCACGCTGCCATCCGAAGGTGAAAGACAGCCAAAGACCCGCATCTGCTGCCAAAAGGGACTTCTAACCTTCATCAAATGCTTGCGAAACATTCTCAGAATGTTCTAACATCGTGAACCTCACACTGAGGTTCTGATAGAATGCATCCAACCAACCTTggatacacacgcacacattaaaATGTGACGTCAACAGGTGACTCATGAAGTTATGCCTCAGAGAAATCAGTATTTACGCTTGAACCTGCTGTATTCTGCTAGTGAGGACAGTTTGAGCTCTCTCTGCCCTGAAATGAGACACCTGATCCTCTCATTAGAGAACAGGAATGAGGCACATTCATTCTGACCTTTTCGATGTCGCTGCGTTCACCAAACAGCTCACACATCAGGAAGAATCTGATATACAAAATCCATCAAAAAAAATGGTACACATAAACAGTTTCACAATGGGAAGTTGGTCACGGATAGCTCACTTTGGATAAGAAATTCTGTTAGGCAAGTAAACTAACTTCTAATCCAACTTTTTAGGTAAAGAGAATTTTTTACAAGGAAGTTGACTTACAAAACCTAAAGTTACCCAATCAGAATAAACATCTGAGTCAAACTATGCCAAGATAACAGATTCAAGCTTCTCTGGGCTGTGCTATTATTGTTCACTTGTTCAAAGGTTTTAGAAAAATCTCCTAATAAAAGCAAACGTTTTGCAATAAAGAACTGAAGGAAGAAAAATGTAGAGACTTTGTAACAAGAAACAATGGAGAGTCTTGTGAGAGTTTAAGCACCTCCCCCACTCTGCCAGCCCAACTCCTGCTGAACTGCATTTGCCTGTGTTTCTGTTACTCTCTTGGGCAGACTGTTGGTATACAATGTGGAAAGGGAACGAGAGAGATTGGAGTGTGCTTTTATCTGTGCTTTAAACCATAGAATCAGTACCAGTCATGCTGCATCTTCCCAACTCACAGTCATTTTACCAAGAAGGAGGTTCCAGGATCAACATCTTGGTGTTAAGGCTAGAACAACATTCACTGTAAAGTAAAAGTCATTTCCAAACAATGGACTACACCTAAAATCAAACTGGAAAAGATAGGCTGATAAATGCTGGCCCATTCCAAGATGTTCTGGGTTTTAACCTTTCAAATAATTcccatcatttttaaatgatctttgcAGTTGTTTGAAATTCTTGGATtgggatttttttatataatttttatttcagtgtagTTTATTAATGCttcaatgaataattatttcatttctaaTTCTGGTTTAGATTTTAAGATAATTTTAAGATAATTtaagttttctatttaatatttacatttattttttatttcaatgaacaaaactcattttagtTAACACTGCTTGCAAGcaactgtatttttgtctaGCTTTACTTTTGttcttacaaaaatgtatatattaactGTTTTCCATTACTTTTCagattttgttcatttctgtgACTCGTCTAGGCCtggaaaacacaattttaaaatccCTGACACCTCATCCATGATTGTGGGAACTGCGTATGTTGATTCAGGAACATTCCTTTTGGTAGTCACTGTGAACCAGATCCTGCTTAACCCAGCTCTGCTTTTCCTAATTAAACACTGGCATCCTCTTAATTTTCTATCTATCTGACATTCATATCTACCCAACTTTCTAGATCCACCTAAACTTATCCTCAACCGGGCCTCTCACCTCAGCTGCACATCGTACCCCTGTGAGAGCTGCTCAATCTACTGTATCAATCTAAAGAGACACTCCATACTTATCTTTACCATCTACTGCTTTGCTGTCAACAGACCTTCTAAAATCTTTATCGTCTAGCTGTGCTGCCATCATTTCTCTGTTTAAACTAGAACTGGGCCTCACTGAGGGCTCTGTGTAAGCATGTTTAAGTGTCCTGGGGGATGTCCTGTAATTTAGAGATAGCCCAGAGGGGTATCGGGACAAAAGGCATCTGTATGCAACACACAAAAGGCAGGGGGAGCAGGGATGTTTGTGTCGGTGGGGGGTTAAACCTCTCCTCTTTAATGTAAAGGGTTAACTTCTCTGCACGATTTTATAGCCTTTGCCTCTTCCACGTCTCCTGCCCACTGTAATCTCCACCCATTTCCCTTATTCCAGtgctggagagagagacgggaagAGGGTATGCAGTTACAGAAACATCTGGAGCCGTTTACTGTGAATGCCTTTGTGCCCAGCAAAAAAGGGGCTTTCCACTTCTTTGGGTGAAGCATGCAGATTTTACCCCCAAATCAAAATACgtaatgtaaaaaatgctaatgcgcataaagaaaatgaagcttATTTTAGGACCATTTTGCACGGTGCAAATTTCCACGACCATTTAGCACATTTTGCACACACTGCTGCAACTCCCATTAGTCTCAAGATGTGATGtgatttccatttttatatatataaaaaaaaataaacaaaaaaaaaaaaaccccactataatacaagcataaattaaaagttaaaaacatgttgtataaatacttataaaaacttaaataatatatattattttgcaataCAGAAATTGCTTAATGAacttgatttcatttttttaagacatttcttACTTGTATATTTTGATTCTGGGGTGAAATAAGCACGAGTTTATGGGGCGAGATTTTATAAGATTCCACAAGATCTAAACTCTaaagttttttctttatatgcttaaattcatTTGGCCGTATGAAACCGGTGGCTGAAAGGAGTCTGTAATTTGGTCATATCCGTGAAAGAGAAACCCACAAAAGCCTCTCCAAGAATCTCGGAGATTAAATTCCTCTCTCATTTCTAGCCTTGTTCCCATGGGAATGCCAAAGGCCGCCTTTCTGGATGAGAAGCCTGGTGGAACCAAAACGTCCATCCAAAcaaccaaaagaaataaaactgaaacctgacaaaaaaaaaaaaagaaaacgcttCTTTGTGCAGGAGGACGGTATGACAGAAGGCAAGGGGGTGTTGGGGATTTCAATGCCCTAACTTGTCAATCATTTCCCtaacagctgttttctctgctgTTCCAACAAAGACTCGAGATGATCTGCTCTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131365 True 3418 lncRNA 0.38 2 15990693 15994265

Neighbor

gene id symbol gene type direction distance location
chmp6b chmp6b,LOC107749864,LOC107684156,LOC107755461,LOC107690936,LOC108429718 coding upstream 116723 15871157 ~ 15873970 (+)
LOC122355686 ndst2b,LOC107755463,LOC107684097,LOC107749844,LOC107690932,LOC108410510 coding upstream 478697 15451637 ~ 15511996 (+)
si:ch73-127m5.1 si:ch73-127m5.1,LOC107690930,LOC107755465,LOC107749846,LOC107684096,LOC108410513,LOC108273477 coding upstream 540096 15420652 ~ 15450597 (+)
syt15 syt15,LOC107749849,LOC107601428,LOC107690928,LOC107684091,LOC107755468 coding upstream 583387 15401427 ~ 15407306 (+)
timm23a timm23a,LOC107690962,LOC107684090,LOC107749852,LOC107561858,LOC108426535 coding upstream 601238 15384777 ~ 15389455 (+)
btbd17a btbd17a,LOC107755452,LOC107597820,LOC107690956,LOC107753244,LOC107684110 coding downstream 112793 16107058 ~ 16114050 (+)
map2k6 LOC107684112,LOC107753245,LOC107597823 coding downstream 131649 16125914 ~ 16135698 (+)
unk unk,LOC107597825,LOC107561840,LOC107684115,LOC107704242,LOC107755394 coding downstream 256108 16250373 ~ 16260706 (+)
trnag-ccc_1 NA coding downstream 279538 16273803 ~ 16273873 (+)
LOC122355572 cox10,LOC107597828,LOC107704238,LOC107753249,LOC107692457 coding downstream 439169 16433434 ~ 16467884 (+)
G88559 LOC107690934,LOC107755462,LOC107749843 non-coding upstream 124820 15865036 ~ 15865873 (+)
G88563 NA non-coding upstream 132741 15855756 ~ 15857952 (+)
LOC122355844 NA non-coding upstream 306523 15678678 ~ 15684170 (+)
G88550 LOC107566773,LOC107702427,LOC107581638,LOC107684130 non-coding upstream 343340 15586114 ~ 15647353 (+)
G88741 LOC107690939,LOC107601418,LOC107561818 non-coding downstream 211 15994476 ~ 15996007 (+)
G88794 kcnj16,LOC107597837,LOC107561828,LOC107755422,LOC107753283,LOC107684158 non-coding downstream 188619 16182884 ~ 16206189 (+)
G88802 NA non-coding downstream 245881 16240146 ~ 16240530 (+)
G88803 NA non-coding downstream 247732 16241997 ~ 16242379 (+)
LOC122355834 NA non-coding downstream 307810 16302075 ~ 16310680 (+)
baiap2b baiap2b,LOC107684102,LOC107749842,LOC107690938,LOC107755398,LOC108273716 other upstream 62667 15833284 ~ 15928026 (+)
LOC122355837 ndst2b,LOC107601424,LOC107755463,LOC107690932,LOC107749844,LOC107684097,LOC107561853,LOC108410510 other upstream 216679 15451494 ~ 15774014 (+)
qki2 qki2,LOC108426533,LOC107755469,LOC107690925,LOC107601430,LOC103029551 other upstream 612592 15346545 ~ 15378101 (+)
si:dkey-21c1.4 LOC107755475,LOC107576597,LOC107690918 other upstream 678689 15307426 ~ 15312004 (+)
sfxn2 sfxn2,timp2a,LOC107755483,LOC107722238,LOC107581595,LOC107690949,LOC107565802,LOC107755484,LOC107684079,LOC103024286 other upstream 1050502 14930079 ~ 14940191 (+)
LOC122355667 LOC107704244,LOC107753270,LOC107684139,LOC107561814,LOC107755395 other downstream 241670 16235935 ~ 16239783 (+)
si:ch211-250n8.1 si:ch211-250n8.1,LOC107704243,LOC107753284,LOC107755421,LOC107597839,LOC107684159 other downstream 248604 16242869 ~ 16249690 (+)
fbxw10 LOC107704232,LOC107755393,LOC107580469 other downstream 280411 16274676 ~ 16282229 (+)
rpl38 NA other downstream 1192131 17186396 ~ 17189614 (+)
si:ch211-221j21.3 si:ch211-221j21.3 other downstream 2912379 18906644 ~ 18909787 (+)

Expression


Co-expression Network