fbxw10 (LOC107704232,LOC107755393,LOC107580469)


Basic Information

Item Value
gene id fbxw10
gene name LOC107704232,LOC107755393,LOC107580469
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 16274676 ~ 16282229 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU131535
GGCATATCCTCTCTGGGGGTTCAGATGGGGTGGTCAAGGCATGGAGCACCAACTCTCGCTTCAAGAAGTGCCTGAGGATCTTCCAGCATCCGAAAGAGGTTTTGACCATGTCTTTCCTGTTCCTGCGGATCATTACTGGCTGCATGGATGGAAAGATCCGGATCTTCAACTTTTTAACTGGAGACTGCCTGAGAGTTATTAAGACAAACATGAAGCAATGCCCCGTCCTTTCTCTGCACACGCACCACAACACTGTGGTTGTAAACAACAGAAGCAGTATTCTAATGCTTCAGTTTGCAGAGGTTCACTGGGACTACTCTGCCAGTCCTGTGAGGAATTTTTTGGAGCAGTCCCACGTCTCCGCTGAGAATGTGCTTCGGAGTGCTGAACGGATGACTCAAGGGAGCTCATCCACACTGAAAAGTCATCCTCAGCAGGAGTCCACAAGGGCGGCGACATGGAGTCAACTCCAGGCTTGTTGTCATAGCAGGGCCTCCATCAGCACACAGTCTGAGTCCCG
>XM_043253420.1
TTAACAAAAGTCTGTCCAGTCAATcgaataattatcattatttgtaattcctcacctgcttttattttaaaaacagcgcACTTGGATGGATCTTCACATTTCTGAATCACTAACATGACCGAAGTGAAATGTTTAAGAGGAGAAGCTGGCGATTCAGTGCTCGATTGGTCTTGTAAAGGAGAGGATGAGGTGTTCAGCATTTGTGGACACTGTCAATCGTGTGTCCTCTTTGAGAAGCTGCACCACTCCACCCAGTGGATGAAAAAGGCTGGAGGAGCATCCCAGATGAAGTTTCTCACTGGCGTTCTGGTGCAATGCCGCAACCTTCAAATTCTGGAGAAACTTCAGAGTGTTTTACAAGTCACGTCAGGCAAGGACTTCACATATGCCAGGTCCAGAGGCCAGATCAGCCGATCCGAGGAATGCATATGGAGCATGGATGGAGCCCTGGACACAAAACCGAAAGGAATGGACGCGGAAACCTGGGAATGGTTTAGGAAGAGCCCAGACTGGATCAAGTCCAAGTATGTGCTGGGGCTCTTGTCTGTATGTGATACCTCTCTTTTGCACATGTTAGGAAATCTGGTGCATATCTTGATTGTTAGGGAGAAACACAAATTTCTACAATTCAACAGTTCTGTGACAGAGTCACAAGTCTCCTACCGCGCAGAATCTGACCACACAGATCTGGATCTTCTCATCCAAGCATGTTCTGAATATAAGTCAGCTGACATGCATCAAGAAGCTTACGATGGCAGTCAAACAGGTGTCTTAAAACAGGAGCTTTTACAACAGCtaaatgacTCCAAATCTCTCAAGAGTATCTGTGATGAGATTGAGCTGGACATTCAGAATGTAGACCCCTGGAAGAGAAGAACAAAAAGCCAAGATTCAGACTCCGACCGATTGGACGATCCAGATCCTGCCCTCACTGTTGTTCCCAGGTCGTCAAAATCTCTGTCAGGGGTCAGCCGTCATAGAGATTTCATTAGAAGCCTGCCAGTTGACATTGCAAAGAGGATTTTAGGGCTTTTGGATAAGGTCTCACTGTATAGCTGCAGGCGTGTGTCCTTGCACTGGCAAAGCCTAACAGAGGAGGTCTTAACTGAGATGGAAGTAAAGAAGTGTGTTGAGAAACAGGCCATGATTCTGCAGgGTAACTCAGCCTCTAAGGTCAACCCTGTTTATGCAAAGATCTGTAATGTTGTAGTGCCGATCGGTCAGGAGGACAAGTGCTTTCAGCATGGAGAATCTTTCCCCAAACATAAGCTGTTACAAGAGCAAGATTTGGATTCCGTCTATAAAGGATTTAACACCAAGAACGTGCGATTGGAAGAACGCAACGTGTACTGTGGAGTGTATAACATATCAGTCCTGTTGGAAAGAGAAGATCCCAGTAGAGTGATGCATTATGCTGGGGGGCAGCTGGTGGCGGTTGGCTCCAAGGACCGTATAATCAGGCTGCTGCATGTTCCATCACTAAAAGAGATTCCTCCAGTGATCCAAGGACATGCAGGTAGTATAAGAGCCGTGCTGGTTTGTGAAGAGAGAGACCTAGTTATAAGCGCCAGCTATGACCTCAGTATCAGGTGCTGGAATCTGAAGACAGgtgtatgtataattatttttaatggacATTTTGGCACTATAAACTGCCTGGATTTATATGAAGATAGACTGGTGTCTGGAGCCAAAGACTGTAGAGTTAAAGTGTGGAACCTACTGACTGGGAAGTGTGTTGAGAATCTGAAGTTTAAACACCCTAAACCAATCATGTGTGTGAGGATTAATGAAACTCTGGTGATTAGTAGCTGTGCTGGAGGTCAGATCAGAATATGGAGCATGGAGACAGCATCACTAATGAGGCAAATCAGTGGCCACCAGGGGGCAGTGCTGTGTCTGTGCATCGATCAGTGGCATATCCTCTCTGGGGGTTCAGATGGGGTGGTCAAGGCATGGAGCACCAACTCTCGCTTCAAGAAGTGCCTGAGGATCTTCCAGCATCCGAAAGAGGTTTTGACCATGTCTTTCCTGTTCCTGCGGATCATTACTGGCTGCATGGATGGAAAGATCCGGATCTTCAACTTTTTAACTGGAGACTGCCTGAGAGTTATTAAGACAAACATGAAGCAATGCCCCGTCCTTTCTCTGCACACGCACCACAACACTGTGGTTGTAAACAACAGAAGCAGTATTCTAATGCTTCAGTTTGCAGAGGTTCACTGGGACTACTCTGCCAGTCCTGTGAGGAATTTTTTGGAGCAGTCCCACGTCTCCGCTGAGAATGTGCTTCGGAGTGCTGAACGGATGACTCAAGGGAGCTCATCCACACTGAAAAGTCATCCTCAGCAGGAGTCCACAAGGGCGGCGACATGGAGTCAACTCCAGGCTTGTTGTCATAGCAGGGCCTCCATCAGCACACAGTCTGAGTCCCGCACCAGGCCTCGATCCGTTCTTTCAGCAGGCAGGCCTGTCAGTGGATACAAGGACTTTCAGAACAGAGTCAGCCAGACACAAAACACTTCCACCAGAAGTTTGGATACCAAACGCTCGGTACTCAGCCGGAGTGAGAAGGCAGCCCGAGAAAGGGTGAGAAAACGAGGTCCTCACCATCCAATGACCCAAGACCTAATCCTGCTAAGGACCAGCAGTGCCCAGCAGGGCCAGTACAGTGACCTGGCAAGGTCCAACATGGAGCTGAATGCCAGAGTACGCGATGCCTGGGGACCTGATTCATCTAAAGAACCATCGTTTCGAAACaccaccaaaaaaaaccctgaaatccATAGCCCATTCACTACCCATAGCATTGACCTCAGACTTCAGAGCTCCTCACATTCCAGACAGACCTGCTTTACCCCCCACTCCCTTCCCAAACAGTCCCAGAGAGCAATCAAAGTAGCCAGATCTAGAACAAACAAGATCGGCCCACTGAAAACAACTTCCCCTGAAGATGACAAGACACCACAACGATTGTTTCTGAGGCGACCCTCCATGCCCACACATTCCAATGAAGATTTTGAAATGACCAACAAGTGTAGTTCATATCACGTCCCACTAAACCCCTTCAGGGAACAAGCAGACTTTCAACTGAGGACGGACACTCAACTGGAGGCTTACATTCACGAGTGTAGCAGGCAGCAGCAGAGTTACAATCATGGCAGTGGTGATGACCAAGCTAAAACTGTTTGGAAGCAGAGGAGTCACTGTCATCAGTAAGGTACTAAAATCTAAAGGCATGGCACTTTTGTCATAgtgtaaaaagtcaaaactgaattctcagtttaaaatgttgaaCTCTGTAGAGgtaacatatataataacataatacaatatttaaaatattatgttgcaTTTGGTTGAAAATCTCATTTAAGAGGGTAACTCTGTTTAGAATATAAAGAGGCAACAGTACAAGCTGATCATTAGCTAGACCATTTGGAACCAGGTCTATAAGCTTCTACTAGGTAAAAACCATGATCCAAAACACAGCTAAATTGTTGGATGTAGCATTATATCTATGCAAATTGAGCTAATTAGtgccatgtttttcttttgtgtcttttttgtaTACTTGAACATGTTTGCTAGGGGGCAGcaaagtacaaattaaaatatcaaatcaaatcatatCAAATGAATATTATTCTATGGGTGGTATGTAactaatgaatattatttaaaatagttgtaaatatttacattttaaaggatATTTTGCCTTACACTGTAATCTTTATACATTTACTTGTGTGTTTTAAGAATGTCTGATTATTTCAGACCGTTCATCACCAGTCCTGCATGCATGTACAAACACTGACTTCTACCTAATTAATGAGAGATGCTGACAAGAAGTGTACACATATTTTGCTGATGTTGGAgagacaaaataaattacatttgccaCA

Function

NR:

description
CMT1A duplicated region transcript 1 protein-like

GO: NA

KEGG:

id description
K10266 FBXW10; F-box and WD-40 domain protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
TU131535 False 520 TUCP 0.51 4 16278801 16280629
XM_043253420.1 True 3908 mRNA 0.44 14 16274676 16282229

Neighbor

gene id symbol gene type direction distance location
trnag-ccc_1 NA coding upstream 803 16273803 ~ 16273873 (+)
unk unk,LOC107597825,LOC107561840,LOC107684115,LOC107704242,LOC107755394 coding upstream 13970 16250373 ~ 16260706 (+)
map2k6 LOC107684112,LOC107753245,LOC107597823 coding upstream 138978 16125914 ~ 16135698 (+)
btbd17a btbd17a,LOC107755452,LOC107597820,LOC107690956,LOC107753244,LOC107684110 coding upstream 160626 16107058 ~ 16114050 (+)
chmp6b chmp6b,LOC107749864,LOC107684156,LOC107755461,LOC107690936,LOC108429718 coding upstream 400706 15871157 ~ 15873970 (+)
LOC122355572 cox10,LOC107597828,LOC107704238,LOC107753249,LOC107692457 coding downstream 151205 16433434 ~ 16467884 (+)
hs3st3b1b hs3st3b1b,hs3st3b1,LOC107753250,LOC107692452,LOC105904252,LOC106589627 coding downstream 189557 16471786 ~ 16491761 (+)
LOC122355198 LOC107753253,LOC107755392,LOC107684484,LOC107597833,LOC107692455 coding downstream 375930 16658159 ~ 16661120 (+)
LOC122355401 LOC107755445,LOC107684490,LOC107597842 coding downstream 379366 16661595 ~ 16666374 (+)
LOC122355898 NA coding downstream 454665 16736894 ~ 16737012 (+)
G88803 NA non-coding upstream 32297 16241997 ~ 16242379 (+)
G88802 NA non-coding upstream 34146 16240146 ~ 16240530 (+)
G88794 kcnj16,LOC107597837,LOC107561828,LOC107755422,LOC107753283,LOC107684158 non-coding upstream 68487 16182884 ~ 16206189 (+)
G88741 LOC107690939,LOC107601418,LOC107561818 non-coding upstream 278669 15994476 ~ 15996007 (+)
G88734 NA non-coding upstream 280411 15990693 ~ 15994265 (+)
LOC122355834 NA non-coding downstream 19846 16302075 ~ 16310680 (+)
G88891 NA non-coding downstream 188880 16471109 ~ 16471309 (+)
LOC122355493 NA non-coding downstream 286433 16568662 ~ 16633881 (+)
G88897 NA non-coding downstream 311187 16593416 ~ 16602093 (+)
G88915 NA non-coding downstream 363364 16645593 ~ 16646500 (+)
si:ch211-250n8.1 si:ch211-250n8.1,LOC107704243,LOC107753284,LOC107755421,LOC107597839,LOC107684159 other upstream 24986 16242869 ~ 16249690 (+)
LOC122355667 LOC107704244,LOC107753270,LOC107684139,LOC107561814,LOC107755395 other upstream 34893 16235935 ~ 16239783 (+)
baiap2b baiap2b,LOC107684102,LOC107749842,LOC107690938,LOC107755398,LOC108273716 other upstream 346650 15833284 ~ 15928026 (+)
LOC122355837 ndst2b,LOC107601424,LOC107755463,LOC107690932,LOC107749844,LOC107684097,LOC107561853,LOC108410510 other upstream 500662 15451494 ~ 15774014 (+)
qki2 qki2,LOC108426533,LOC107755469,LOC107690925,LOC107601430,LOC103029551 other upstream 896575 15346545 ~ 15378101 (+)
rpl38 NA other downstream 904167 17186396 ~ 17189614 (+)
si:ch211-221j21.3 si:ch211-221j21.3 other downstream 2624415 18906644 ~ 18909787 (+)
G89390 LOC107549327,LOC107666744,LOC107711400,LOC107567800 other downstream 3686415 19968644 ~ 19972852 (+)
G89392 bccip,LOC107667792,LOC107567807,LOC107549343,LOC107666811,LOC107720469 other downstream 3694366 19976595 ~ 20006135 (+)
G89450 NA other downstream 3863550 20145779 ~ 20148935 (+)

Expression


Co-expression Network