LOC122355059 (adprh,LOC108411014,LOC108274007,LOC105894051)


Basic Information

Item Value
gene id LOC122355059
gene name adprh,LOC108411014,LOC108274007,LOC105894051
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 6324493 ~ 6391831 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253015.1
CAACTTACCCACAGCAATGCTTCGTTAACTCTGCTGTGGGCGGTCCCTACTCCACACGCTAAATTACATCCTGCACCAGGTAGATGGCGCTGTCCCCATTTATgcagtaattttacatttgcactcCGTTACACTTGCCATACATTTCGTCAAGCGAAGAGAATTGAAACAGTAGGGGAGCAGCAAACACTGCGTACCTGCTCTGTCAATCGGAATAAGTacaactgttaaaaatattaagtcgAAAGTAAAAACGTTTGAATTCGCGGCGGTTTCCAGCAACTTCTCTCATAACGGGCAGCTGAAGTTGGCGTGAGCGTCAAATATGGAATGTACTGTGGATCATTACACTGCAGGAATGCTGCTCAGCGGTGTAGGAGATGCTCTGGGTTACAGGAATCAACTGTGGGAATACAACCAATCTGGCCCTGCCATCCACCAGGAACTGCAAGAGCTAGGGGGGCTGAAAAACATCTCTGTGGAGCTTCCTGATTGGCCAGTTAGTGATGACACTGTGCTTCACTTGGCAACCGCTGAGGCCCTAGCAACAGGAAAAGCAGGCTTGGAGCTACTGCATGAGGTTGCTTTCCGATACGTGGAGGGAATGAAGGACATGGAAGGGAGGAAGCCAGGACCTTCAAGTATTCTAGGTATTGCACAGTTGCGCCCAGGCACTGAAGGGGGTTACAGGGTGCCGTATAACCAAGCCACAGGTTGTGGGGCAGCCATGAGGTCCATGTGCATTGGCCTTAGATATCCTTATCCTGATCAGCTGTCCTCACTGGTTGAGGTTGCTGTGGAGACTGGAAGAATGACTCATCCTCATCCAACCGGTTTCCTTGGGGCTGTTGCTTCAGCCTTGTTCACCACTTATGCAGTCCAGCGAAGACCAATCACAACCTGGGGTCTGGGTTTATTGGAGGAAGCTTGTCCTgttgcaaaaacatttgttacgTCTGCAGGATATGCTGTTATGGAGACTGAGAGAGACTGGGACTACTTTACTGAAAAATGGAAATGGTATTTGGATCTAAGAGGACTATCTTTGGGGGCTGGGCCAGTTATTTGGCCTGACCAGTATGGGCCAGCAGAACGAGATGAGGCCTACAAGAGGTTCAGTCTGTCAGGTTGGGCTGGTCGAAGTGGTCATGATGCTCCAATGATAGCTCTGGATGCCCTCTTAGGAGCAGGCTTGAACTGGGAGGAACTCATGAGTCGAGCAGGATTTCATGGAGGAGACAGTGACAGTACTGCAGTGATCGCCTGCTGCTGTTGGGGTCTGCTGTATGGAATGGACAGAGTTCCATGGTGTAACTATAGAAACCTGGAGTACAGAGAACGACTGGAGACTGTGGCTCAAAATCTGTATACCCTTTCTCACTGATgaagcaaaactgtaaacagagaaaatacacaaaataaataagtaatataagAA

Function

symbol description
adprh Predicted to enable GTPase activator activity. Predicted to be involved in activation of GTPase activity and intracellular protein transport. Predicted to act upstream of or within protein de-ADP-ribosylation. Is expressed in several structures, including adaxial cell; lens; liver; musculature system; and notochord. Orthologous to human ADPRH (ADP-ribosylarginine hydrolase).

NR:

description
PREDICTED: ADP-ribosylarginine hydrolase

GO:

id name namespace
GO:0051725 protein de-ADP-ribosylation biological_process
GO:0003875 ADP-ribosylarginine hydrolase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01245 ADPRH; ADP-ribosylarginine hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253015.1 True 1438 mRNA 0.48 9 6324493 6391831

Neighbor

gene id symbol gene type direction distance location
med1 med1 coding upstream 461203 5840203 ~ 5863290 (+)
LOC122355830 tceb2,LOC108280902,LOC107564001,LOC103036770,LOC108427344 coding upstream 558650 5762494 ~ 5765843 (+)
kbtbd2 kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836 coding upstream 624587 5691358 ~ 5699906 (+)
si:ch211-217a12.1 si:ch211-217a12.1,LOC107674759,LOC108431403,LOC106590406 coding upstream 640165 5668900 ~ 5684328 (+)
fkbp10b fkbp9,fkbp10b,LOC107674681 coding upstream 703153 5614079 ~ 5621340 (+)
LOC122355310 LOC107569775 coding downstream 189757 6581588 ~ 6583943 (+)
plxdc1 plxdc1,LOC107732187,LOC107566549,LOC107694606 coding downstream 407954 6799785 ~ 6961984 (+)
plcd3b plcd3b,LOC107751666,LOC107561636,LOC107662566 coding downstream 791599 7183430 ~ 7219444 (+)
nmt1b LOC107561637,LOC107662571,LOC107758416 coding downstream 834031 7225862 ~ 7233649 (+)
svild LOC107758427,LOC107675649,LOC107561632 coding downstream 842107 7233938 ~ 7292140 (+)
G85971 NA non-coding upstream 205980 6101162 ~ 6118513 (+)
G85967 NA non-coding upstream 226159 6098128 ~ 6098334 (+)
G85905 NA non-coding upstream 366259 5957894 ~ 5958234 (+)
G85774 NA non-coding upstream 502806 5821431 ~ 5821687 (+)
G85713 NA non-coding upstream 722312 5601474 ~ 5602181 (+)
G86033 NA non-coding downstream 132129 6523960 ~ 6524390 (+)
G86037 NA non-coding downstream 177392 6569223 ~ 6569454 (+)
G86038 NA non-coding downstream 177882 6569713 ~ 6569968 (+)
G86043 NA non-coding downstream 182083 6573914 ~ 6574126 (+)
G86045 LOC101886504,LOC101886427 non-coding downstream 277093 6668924 ~ 6669449 (+)
G85986 adprh,LOC108411014,LOC107726130,LOC105894051,LOC108274007 other upstream 107926 6214919 ~ 6216567 (+)
G85962 NA other upstream 227761 6095948 ~ 6096732 (+)
becn1 becn1,atg6 other upstream 371007 5886952 ~ 5953486 (+)
LOC122355829 tgfb1i1 other upstream 508178 5766397 ~ 5816315 (+)
drosha drosha,rnasen,LOC107716466,LOC107727962,LOC107556767 other upstream 877774 5426581 ~ 5446719 (+)
G86019 LOC107570179 other downstream 48990 6440821 ~ 6441526 (+)
G86029 NA other downstream 129998 6521829 ~ 6522571 (+)
G86142 NA other downstream 911307 7303138 ~ 7304848 (+)
G86143 NA other downstream 916093 7307924 ~ 7308229 (+)
LOC122355675 NA other downstream 1423992 7815823 ~ 7844083 (+)

Expression


Co-expression Network