adrb1 (adrb1,LOC107755541,LOC107566002,LOC107702449,LOC107689959,LOC107581665)


Basic Information

Item Value
gene id adrb1
gene name adrb1,LOC107755541,LOC107566002,LOC107702449,LOC107689959,LOC107581665
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13372489 ~ 13375488 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253077.1
gtgAGCGCGTGCGGGCGCTGGGCTGGACAGCAAAGCGCGGATGGAAGCGCTCCACACCGGACCTGAAGTTCTGAATGAACGCGCTTCATTTCTCCACACCATGGGAGACGGTTTACCGTCCGTAAACTACAGCAATGACTCTAAACGCGGCACGGTGGATCTTAACTTATCAGAACAGTGGCTCGTGGGCATGGGAATCATCATGGGTCTGATAGTGTTCATCATTGTAGTGGGAAATATACTGGTTATAGTCGCCATAGCGCGGAATCAGAGGCTCCAGACGCTCACCAATGTTTTCATCGTGTCTCTGGCGTGCGCAGATCTCATCATGGGGTTACTGGTAGTGCCATTTGGCGCAGCCTTGGAGGTTAGAGGAGCCTGGATGTATGGGTCGTTCTTCTGTGAATTCTGGATATCTCTTGATGTACTTTGCGTCACGGCGAGCATCGAGACCCTGTGCGTAATTGCAATAGACAGGTATATCGCCATCATCTCTCCATTTCGCTATCAGAGTCTATTGACGAAAGCGCGAGCCAAGGTGGTGGTTTGCGGAGTGTGGGCTATATCGGCTCTGGTGTCGTTTCCACCCATCCTGATGCACTGGTCCCGGGACAGCGAGGAGACCGAGTGCTATGACAATCCCGAGTGCTGCGACTTCATCACCAATCGCGCATATGCCATCTCCTCCTCTATTATATCGTTTTACATCCCTTTAATAGTCATGATCTTCGTATATGCCAGAGTGTACAGAGAAGCCAAACAACAGCTGAACAAGATCAACAAATGTGAGGGAAGGTTCTACAACAATCATGGTACTAATTGCAAACCTAACCGAAAACGAACCACCAAGATCCTGGCTTTAAAAGAGCAGAAGGCGCTGAAAACGTTGGGAATTATCATGGGAACGTTCACGCTCTGCTGGCTGCCGTTCTTTATCGTTAACGTGGTGCGCGTGTTTTGCGCGCAAGTGGTGGATAAGGAGCTCTTCGTGTTTTTGAACTGGCTAGGGTACGTAAACTCCGCCTTTAACCCCATCATATACTGTCGGAGTCCCGACTTCAGGAAAGCCTTCAAGAGGCTGTTGTGTTGTCCGAGGCAGGCGGACCGCCGGCTGCACGTGAGCTCGTGCGATCTGTCGCGCTGCGCCGGGGGCTTCGGGAACTCAATGGAGCAGAGCATGCTCGGGACGTGGTCGGACTGCAACGGCGCGGACAGCAGCGACTGCAGTCTGGAGAGAAACGGCAGGATGTCCCATTCGGAGTCCCAACTGTAAAAGTACAACCGTTGCTATTTAATCGATATTACGCGAGCAAGAGCGCTGTTTGTGTTTCGTATCAGGTAACGACGGCGGCTGCGCTGAAAGTGTgatattaattattcaattaaaaattaatgtaaagTCAACTGCGTTTCTGAGAAAAATGGCCAGTCGCACATTTCTTCTTCGTCAACGAAAATAgttccatgaaaaaaaaactttttttaactaTCGCCAAGCAACGCACAAACTAAATAGCATATATGGGTGGAGCTGAGCGACATATCCCCCTTCCCCCACGCAACGCGAAATCAATGCTCCGGTTCCGCTCCGGATTTTACTCCCCACTCCGAAAAAACGCGCACCCGCTCCGCTTCTGCGGCGACATGTTTCTCCGTGAACACGAATAAGCGGAGTGATACGAACAGTGAAAAGTCCGCATAACAAAATCAAAAAGCGGCTCATCCAATCAAATTCGTGGACCGGAACTAACTGTTGTACGTAATAGCTAGATAACGGTGTCCAAAACGAACCCATTTAATCCCAAATTTTCCCTGCTAAATCAGACCAAAAATTTGAGACGTTGAAGCCAATTGGCTAAATTTAAGCAAAATTTGAAATTTGCTAATTCATCAATTGATATTTTTACTACTCTGCGATTGTGtggaaaatgcatttcaaagacAGGccacatgcatttctttatttcgttaaatgtaacaaaattccttaaaatgcattgaaatgtaTGCAAGTTTCAATCAAACAGTCATTCAAAATGGCTTTCTCATTAATCACAAATTTGTTCAAtgacatgaaattaaattaaacgtaGTCTATATTGCAATGCGATTCATACAAAACAGTGttcttaaaattatattaatgatagacccattaaataaagcaaactaAAATGATCGCATTACATCAAGGCAGTCTGTGCCTTCATATATTGCTGATAATAAAcgcatgtaaaataaatacagaaataaaactttttctaGATCCCTCAAAGCCtaaagcaaataataattagttactttttgtgCTTTTCCGAGTATGCAAAGAGGAAATGCGGTCACAAATGTTAATGTGGGATTAAATGGGTTCAAACATTGTGCAAGGGATGAACTGTAAAAACTGAAAGCTTTTTAAATACGAACCATTCAGTATTTAGCGGCAATTAATGGCAGTTTGGCCTGACTGAAGCAGTGTTCTTCATTCTTCACAGCAATGCTTTCAGGCTTTGAGCCTTTGCATTGCTCATTGGAATGTTTAATTCTCGAATGTGTGATATTAAATCTTGTTTTACCTCATACCTGTATAATGTGCAAATTGTACAAGGAGGACgttgtttatattaaacaaatgttaaaatgtacagtatttatttgatgcaTTGTACagcatatacaaaaaaaaatagcgtggcaatgttataatgttaaatattacttGTGATTTGCACCTTATTTGTGTCAAATGTGAGCTGCCCGCGGGGCAAAGAGCTTCTTgcattttccattcattttgaATTTCTACCAGTTATAAATGTTAGATTGATTTATCTGTAAATGAGACGCACAGACATATTTTTGGGCAGGAATATATCGTCTAAACTTCACATTTCTACAGAAATAATTTATGTACCAGTGCCTCATGTGAAGTATTGTGCAAGATTCATCATGTTGACGTCAAGTTGGATAGCGTGCAATAAAATGTGATATCGTGAAAAGGCA

Function

symbol description
adrb1 Predicted to enable beta1-adrenergic receptor activity. Acts upstream of or within regulation of heart rate. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including adipose tissue; eye; heart; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including chronic obstructive pulmonary disease; hypertension (multiple); low tension glaucoma; obstructive sleep apnea; and periodontitis. Orthologous to human ADRB1 (adrenoceptor beta 1).

NR:

description
PREDICTED: beta-1 adrenergic receptor

GO:

id name namespace
GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway biological_process
GO:0002027 regulation of heart rate biological_process
GO:0045823 positive regulation of heart contraction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004940 beta1-adrenergic receptor activity molecular_function

KEGG:

id description
K04141 ADRB1; adrenergic receptor beta-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253077.1 True 3000 mRNA 0.43 1 13372489 13375488

Neighbor

gene id symbol gene type direction distance location
tdrd1 LOC107702448,LOC107755540,LOC107566104,LOC107581549,LOC107708149,LOC107689961 coding downstream 37697 13325153 ~ 13334792 (-)
vwa2 vwa2,LOC107755546,LOC107702446,LOC107707947 coding downstream 47794 13307621 ~ 13324695 (-)
LOC122355472 NA coding downstream 76235 13293736 ~ 13296254 (-)
trub1 trub1,LOC107755443,LOC107689966,LOC107702428,LOC107708440 coding downstream 169619 13199764 ~ 13202870 (-)
atrnl1b atrnl1b,atrnl1,LOC107755548,LOC107689951,LOC107708169,LOC107702414 coding downstream 175404 13113810 ~ 13197085 (-)
nhlrc2 nhlrc2,LOC107755539,LOC107708141,LOC107702418,LOC107684116 coding upstream 6156 13381644 ~ 13398387 (-)
plekhs1.1 LOC107566815,LOC107755416,LOC107702419 coding upstream 30305 13405793 ~ 13410281 (-)
LOC122355682 NA coding upstream 38693 13414181 ~ 13418256 (-)
LOC122355076 LOC107566710,LOC107684141,LOC107581554 coding upstream 43229 13418717 ~ 13422958 (-)
casp7 casp7,LOC107707870,LOC107684033,LOC107581558,LOC107566160 coding upstream 61419 13436907 ~ 13444732 (-)
G88003 NA non-coding downstream 4169 13365953 ~ 13368320 (-)
G87860 gabrz,LOC108273489,LOC107675029,LOC107754081,LOC107565977 non-coding downstream 564843 12804696 ~ 12807646 (-)
LOC122355629 NA non-coding downstream 733753 12613150 ~ 12638736 (-)
G87746 NA non-coding downstream 885094 12438750 ~ 12487395 (-)
G87695 LOC107669482,LOC107552775 non-coding downstream 1025423 12344898 ~ 12347066 (-)
G88019 NA non-coding upstream 58406 13433894 ~ 13434125 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding upstream 82968 13458456 ~ 13459865 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding upstream 84657 13460145 ~ 13461245 (-)
LOC122355666 NA non-coding upstream 333567 13709055 ~ 13712541 (-)
G88146 NA non-coding upstream 449112 13824600 ~ 13894358 (-)
G87845 LOC107675011 other downstream 619811 12751904 ~ 12752678 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other downstream 697017 12649383 ~ 12675472 (-)
G87608 NA other downstream 1421334 11948540 ~ 11951155 (-)
G87569 NA other downstream 1536877 11832879 ~ 11835612 (-)
G87489 NA other downstream 2049886 11321423 ~ 11322603 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 48820 13424308 ~ 13432195 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 148180 13523668 ~ 13540301 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other upstream 233932 13609420 ~ 13691340 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other upstream 597394 13972882 ~ 13976511 (-)
G88250 LOC107702476 other upstream 772559 14148047 ~ 14150005 (-)

Expression


Co-expression Network