sost (LOC107552770,LOC107706903,LOC107582741,LOC107743777)


Basic Information

Item Value
gene id sost
gene name LOC107552770,LOC107706903,LOC107582741,LOC107743777
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 11989281 ~ 11993628 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253098.1
GTACTTTAAAAAGGCAAGCCTCTCACGAAGAGAAGAAAACCGGTCCGAGTTTGCCCGCTGAACGTCTCGTTCTGTGTTTGAGCATGCAGGTGTCTCTAGCGCTCGTGCAGTGCGGCGCGcggctgttgctgctgctgctgctacagGGATGTTTCACAGCTGCACACGGATGGAgagctttaaaaaatgatgctACAGAAATTATACCAGAATACACGGAGGACATGAATAGACCTGAGGAGCAGATACAAATTTCTAATAACAACACAATGAACCGAGCTAAGAACGGAGGAAGGAGGTCATCAGCCAACTCGCGTACTTATGgaGTCTCTGAAGTAAGCTGCCGGGAGCTGCGTTCTACCCGCTTTGTTACTGATGGATCTTGCCGAAGCGTCAAACCTGTGAAAGAACTGGTGTGTTCTGGTCAGTGCCTTCCAGCTCACTTGATGCCAAACTCAATTCTAAGGGGAAAATGGTGGAGAAGCAGCTCATCCGATTACCGCTGCATTCCTGCTCACTCCCGCACCCAGCGGATACAGCTCCAGTGTCCTAATGGACCAAACCGGACATACAAAATCCGAGTAGTCACGTCTTGCAAGTGCAAACGCTACACTCGCCATCACAACCAATCGGACGTCAAGGAGTTGTCCTCCAAGAAGCCACGACGCAATAAGAAACACCGTAGCAAAGTGCCTTCGATCAACAGCAATTCGTACTGAACTGAAACAGAGTCCTGCACACATACAGATATACctatatacatatgcacacatacttCAGAAACTGCAATCCTCAACTacaagggaaggaataaacgcATTAGCTTTTAACAAACGTGTTGGCGTGCCAACAAGTTTCCAATGTATTTCAGATGTCTCACTGTTTGTATGTGCTCTTGAGTCGAAACAGTCCTAGTTTGATCGCAGATTGCCAGCGGACTAATGGACGCTTGAGTAAAAGACGTATGATGTTATGTGAGATTAGTTCAGGGAATGATGATATTTTGAGGAAGGAGGAATAACTCCATATATTCTTGCCCAGGCAGTTCATTTCGAGTTTGAAGTTCACTGAAAGGGTAAGCTAACTGCAGGCAAGCACGCTGAGCGCTCAACCAATCCACCAAGCGCTCATGTGAATGTTTGTGTACCAGATTTGTCCTCCTCTTCTGGGACTTGGAGCGGTGTATGATTTGACCGTCCAGCCGTGTCGGGCCCAAAAGACATGCCGCTGCTGACAGATCACTGAGGCCCAGAATTCTTAACCTTGGTCATTTCTACCAGCCCACGAGTCCTCTTGACGGGCTGGGGAGCCGGGCCAGGCACCATGTGAGTTTCTGCAACTTCCCATTTCCACAAGAAACTGATCGGAACTGGCAGTTATGGAGAGTTCGAAAAGTTGTGTCAGCCCTCCGCGGTCCAAGTCCCCGGAGGTCAAGAACCGCAAACGATATTCCTGTGACTTGTCCTAATTACCAAATAGTTCCATTCCTGTGTTTAGGATTTGAGTCATAAAAAGCCATTTCCTCTAGACATGGTCAGTTCCTGTTTGTTAGAACACCCGAAAAAGAGGCCCACATGTGTGCAAGAATCTGCAGCAATTCCTCCCGGGCAAAGAACCTTTCTGCACCCTCCTTCAATGGAAACCATTTGGAGATATTCAGCTATCTGCAATCGCTAGCAGGTTACCTACATCCATTACTGAAGTCTTTAGGAAAGATGTCATCCTTCCTGTCTCGTGACCGGAAAAGAAGAGACAATTAAGTGAACCAAACTTTGAAATTGTGGTCTGGATGTTGATTTTACACAGGATAATGCCAATTGTTCAACATTTGCAGCTCGTGACTTCCCCACCTTTTTTTCCAGATCAGTGCTGataatatttgcttatttttcaaTTGTGTATTTGAAATAGCAACTGGAAGGGATTTTTATAATGTAAGCAGACTTGCCATGAATAGCGACTTGTACATAATGTACCTGTGTGGTCACACTGAGCGGCATCCTCCTCCAAAGAATGGATCCCAACTCTCTGTCCGACCAAAAGACTGTTATAAAGAATGAATtgcgtatttatttttttcgatttcctcatttaaattatttatcttttgtaGAAAATAATAGCCATTATTGTACTATATGTAATTATAGTGAATTTCATAACGAAAAAGAGTACATGAATAAAGTTAAGCAACGTA

Function

NR:

description
PREDICTED: sclerostin

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
K16834 SOST; sclerostin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253098.1 True 2197 mRNA 0.45 2 11989281 11993628

Neighbor

gene id symbol gene type direction distance location
dusp3a dusp3a,dusp3,LOC107669488,LOC107552769,LOC107666929,LOC107582744 coding upstream 7287 11971695 ~ 11981994 (+)
arl4d arl4d,LOC107552768,LOC107706901,LOC107582746,LOC107727318 coding upstream 35298 11951851 ~ 11953983 (+)
tmem106a LOC107706900,LOC107552767,LOC107669487,LOC107666933,LOC107727317 coding upstream 39649 11946071 ~ 11949632 (+)
skap1 skap1,LOC107666922,LOC107727295,LOC107669469 coding upstream 57147 11905082 ~ 11932134 (+)
hoxb1b hoxb1b,LOC107669476,LOC107552742,LOC107706871 coding upstream 91711 11879440 ~ 11897570 (+)
meox1 meox1,LOC107706874,LOC107669480,LOC107666908,LOC107743797 coding downstream 51895 12045523 ~ 12051003 (+)
etv4 etv4,LOC107552771,LOC107706904 coding downstream 86469 12080097 ~ 12102703 (+)
spata20 spata20 coding downstream 119629 12113257 ~ 12147867 (+)
cacna1g cacna1g,LOC107754113,LOC107552774 coding downstream 171961 12165589 ~ 12352484 (+)
LOC122355068 uts2r,LOC107552777,LOC107754100,LOC107689263,LOC107577513,LOC107743796,LOC107691210 coding downstream 378800 12372428 ~ 12402861 (+)
G87337 chmp2a,LOC106589279 non-coding upstream 165959 11822063 ~ 11823322 (+)
G87343 NA non-coding upstream 185654 11803287 ~ 11803627 (+)
G87341 NA non-coding upstream 188654 11800356 ~ 11800627 (+)
G87331 NA non-coding upstream 244876 11741981 ~ 11744405 (+)
G87285 NA non-coding upstream 492289 11484193 ~ 11496992 (+)
G87617 NA non-coding downstream 3662 11997290 ~ 11997512 (+)
G87621 NA non-coding downstream 73775 12067403 ~ 12067629 (+)
G87644 NA non-coding downstream 155795 12149423 ~ 12149637 (+)
LOC122355133 NA non-coding downstream 157524 12151152 ~ 12156922 (+)
G87664 NA non-coding downstream 163958 12157586 ~ 12157815 (+)
nbr1a nbr1,LOC107669491,LOC107706899,LOC107582742,LOC107727312,LOC107666919 other upstream 43646 11936841 ~ 11945635 (+)
hoxb6b hoxb6b,LOC107669478,LOC107706870,LOC107582852,LOC107552740,LOC107666911,LOC107727299 other upstream 105184 11882151 ~ 11884097 (+)
G87315 zeb1b,LOC107666916,LOC107706887,LOC107727309,LOC107582755,LOC107552760,LOC107669492 other upstream 287626 11694844 ~ 11701655 (+)
svila LOC107686370,LOC107657481,LOC107584371,LOC107749370,LOC107549408 other upstream 1406736 10523143 ~ 10582545 (+)
LOC122355633 rhoq other upstream 1489583 10497425 ~ 10499698 (+)
G87817 NA other downstream 739136 12732764 ~ 12737649 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other downstream 766746 12760374 ~ 12762731 (+)
G88016 NA other downstream 1448315 13441943 ~ 13444915 (+)
G88082 NA other downstream 1602166 13595794 ~ 13596348 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other downstream 1862067 13855695 ~ 13864743 (+)

Expression


Co-expression Network