nrg3b (nrg3b,LOC107678479,LOC107566665,LOC107689960,LOC107563798,LOC107754077)


Basic Information

Item Value
gene id nrg3b
gene name nrg3b,LOC107678479,LOC107566665,LOC107689960,LOC107563798,LOC107754077
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 12900935 ~ 13019703 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253152.1
ATGAGTGAGAGAACGGCACTAGGGGCCACCATGGAGACCATGACCCTGGAGGAGCCCGGGGTGAAATAAGCCTCTCCTCGGGCCCCAGGGCCCCCTCCATGTGGCCCCCAGTGAAGTGTGGCCCGCCAGCAGACCTGGCTTTGCGTTGTGCCCTTACTGATGGGCTTTGTGGGCCTGGGCCTCAGCCTGATGCTTCTTAAATGATTGTGGTGCTCAGTGCAGGATTACGTCCCGACTGACCTGGTGGATGCCAGCATCGGACAGGACCCGATTTCATCTAAACCCAGTGCCCCGCCGAAGGGTTCCGATGGCTCCACGCCTACCACTTCTTCCCCACCTCACGGCCCGGGTTCAGCGACCCGAGCGGCTGAGGGTACAGGCACAGTGCAAAGGACTCTGATTGGGCAGTCCTCAAACCACACGGCCAGCAGCAGTAGCAGCAGTGGAGGAGGTGGGGCCTTTAGGGGAGGCCTGGGAAACAGAGCCCACACCTGGTGACATAACAGAGTGGGAACGCGATTGACCAACACCACCACCGCCACCCGAGCCACCAATCCTGCCCCACCAGGAGGAAAGGAGGTGACCCCACGCAGCACCACTGTTCAAAAACCCAATGGGGATGGTGGGAGCCGAAATGCATCCCCTTCTGCACGGGCTGCACCGAGGCACACCACCACGAGCACGCATTTTACCACTACGCGACATGACGATGAGCACAAGCACCACGCAAGCGCCCAAACGACCTCCCACCCTCGCGCCGCCTCCAAACCTGGTCAACGCTGGAACCATGGCCGCCTCCAAGGGCCCTTCAACCAAGCCTACTCGCCACACCAACGCTTCAGGACACTTGCCCCTACAACCTCCACCGTACGTTCAGAGTTCTTCAAGCCGTGCCAAGACAGTCAGGAGATGGCCTTCTGTTTGAATGAGAGAGAATGCTTCATCATCGAAACAGTGGCAGGTGTACACAGACACTGCAgGTGTAAAGAGGGCTACCGTGGACTTCGCTGTGACCAGTTTGTCCCAAAGACAGACTCCATCTTATCAGACCCAACAGCAGATGAGCTGGGCATTGAGTTTATGGAGAGTGCGGAAACCTATCAGAGACAGATATTGTCCATCTTCAGCATAGCCATGGGGATCAGCCTGCTGGGAGTGGCTTGCATGGCtctttactgcaaaaacaagagacaaagagagaagaATCGAGCCCACCTGACCGAAATTCGCAACTTGAGGGACAGTACTATCAACGCCTCGGGTCTCATGTCTAAATCCAGCCCCCGACTCGAGAGCGCCCTCCAGCTTCAGAAGAGCAGAAGAGCCCATGGTTTCTCCTCTCCGCAGGCGGCCAGTATCGTTCTCAGCAGCTCTAAAGTTTCTCTACCAAATCATAATCGCAGTCTCTCCATGGGGAAGCGCTGCAGAAGCTGCTCTTTCTCCTCAAGCCCTGCCCTAAAACACAAGGTAACCAATTATCGAGCTGTCTCAAAGTGGACCCCGCCCATCTCTAGAGCAGGCCATCATCTCAGTGGAGGATCTCGAGATTCTCTTCATTCCTATAAACATCTCCAGGAAGTGGAGGTGAATGAGGTGATGCCACAGTCCTTGAGAAGGTGCCAGTCTCACTCGGACAGCAATCAACAAAGCCGTTGTAATCTGAATATGCAAATTATGCTCTCCGCCCATTCCAAAGGAAAGATGGGCTACACCGACGTTCCGTGCACTCGTCTCGACCAGGGAACGACCTTTCCTCCCCCTTCTTTCCGAGCCCACTCCGTACCCATTATCCCCTCCGTTCAGGGACCTGATTTTGGGGAGGGGGGCGGGAACAAGCTGCATAACGGGGGTAGGGGATCTTCCAGCTACAACCTAATCAATCCTGAGACTGAGGCGGAGTCAGTGGCAAATTCCAGCCGATCACTTGCCAGCTCCTCTGTGGCGGTGCAGGATCCACAGACACTCACCTGCTCCGAGTCTGCACTGATGTCAAGGGGccaaatcaaacacaaaagCCTTGTTACCTACACAACAGCCTTGGGATCAGGCACAAGCTCCAGAAGAGCAAAGACTGTCATTTCTATGACCGTACTGGGATCAGGGGCGAAAACCACGCAGTACACCGCCAGCCCGCTGTCTAAGGCTGCCGGAGGACACGAGGCCCGCTCTGCTTTCGGCGAAGGACAGCAGGATGACGGTTTAGGGGACGAAAAAGACTGCTCTTTTTCTGACGGGGTTAGAGGTGTGGCCAGCCTCACATATCCCAAAAGCTGATTGGATAAACGGAAAGATTGCTTTGGAAGCTCCACGTCGGTGTGGACGGGGGCCGGAACGTCCCCTCTTGTGCAAAACACTTACTTTTGGAACAATTTTACTGCATTGTGAAATACAACTAATGACAATTCGGTTTAAAACTCTGACTTACTGACAACACAATGTGAATAGATGCGAGAGAATGAAGACTTTGGTGGGATGGTGATCTAAAGAGTTATTGGAGAGGATTTATATGCCACTATTTAACAAAAAGCTTCAATTTAGAAACCAAATAGTGTCTCATCTCAGTGTTGTTTCTCTActgtaaagaagaaaaaatataatagatgTCAAAACTATATGTATGTCATATATTCCATGTATATGACATACCGAGTGACGAAAATAAAGATGCAAAACATGGTAATGCAGAAGCTTTTTTTCCAATAACTGCTGTTCTATAATCTCAGCCCAGCTCtgtctttttgtctgttttgcttGAGGTCTTGAGAAGAAAAACGGCAGTTTCTGAATAAAATCTGAATGTCACCCTGTCA

Function

symbol description
nrg3b Predicted to enable chemorepellent activity. Predicted to be involved in animal organ development and intracellular signal transduction. Predicted to act upstream of or within nervous system development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Orthologous to human NRG3 (neuregulin 3).

NR:

description
pro-neuregulin-3, membrane-bound isoform-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253152.1 True 2810 mRNA 0.52 21 12900935 13019703

Neighbor

gene id symbol gene type direction distance location
sh2d4bb LOC107754115,LOC107565991,LOC107675008,LOC107689965,LOC108273974,LOC107722446 coding downstream 14771 12879600 ~ 12886164 (-)
si:ch211-214e3.5 LOC107754079,LOC107565766,LOC107675030,LOC107722448,LOC107689947,LOC107563792 coding downstream 45640 12846514 ~ 12855295 (-)
cd37 NA coding downstream 142014 12752719 ~ 12758921 (-)
znf646 znf646,LOC107754085,LOC107675018,LOC107743758,LOC107677879,LOC107563786,LOC107565918 coding downstream 154292 12737819 ~ 12746643 (-)
ccdc189 LOC107566122,LOC107754089,LOC107675027,LOC107743779,LOC107563782,LOC107677867 coding downstream 183751 12714251 ~ 12717184 (-)
atrnl1b atrnl1b,atrnl1,LOC107755548,LOC107689951,LOC107708169,LOC107702414 coding upstream 94107 13113810 ~ 13197085 (-)
trub1 trub1,LOC107755443,LOC107689966,LOC107702428,LOC107708440 coding upstream 180061 13199764 ~ 13202870 (-)
LOC122355472 NA coding upstream 274033 13293736 ~ 13296254 (-)
vwa2 vwa2,LOC107755546,LOC107702446,LOC107707947 coding upstream 287918 13307621 ~ 13324695 (-)
tdrd1 LOC107702448,LOC107755540,LOC107566104,LOC107581549,LOC107708149,LOC107689961 coding upstream 305450 13325153 ~ 13334792 (-)
G87860 gabrz,LOC108273489,LOC107675029,LOC107754081,LOC107565977 non-coding downstream 93289 12804696 ~ 12807646 (-)
LOC122355629 NA non-coding downstream 262199 12613150 ~ 12638736 (-)
G87746 NA non-coding downstream 413540 12438750 ~ 12487395 (-)
G87695 LOC107669482,LOC107552775 non-coding downstream 553869 12344898 ~ 12347066 (-)
G87660 NA non-coding downstream 748198 12152240 ~ 12152737 (-)
G88003 NA non-coding upstream 346250 13365953 ~ 13368320 (-)
G88019 NA non-coding upstream 414191 13433894 ~ 13434125 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding upstream 438753 13458456 ~ 13459865 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding upstream 440442 13460145 ~ 13461245 (-)
LOC122355666 NA non-coding upstream 689352 13709055 ~ 13712541 (-)
G87845 LOC107675011 other downstream 148257 12751904 ~ 12752678 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other downstream 225463 12649383 ~ 12675472 (-)
G87608 NA other downstream 949780 11948540 ~ 11951155 (-)
G87569 NA other downstream 1065323 11832879 ~ 11835612 (-)
G87489 NA other downstream 1578332 11321423 ~ 11322603 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 404605 13424308 ~ 13432195 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 503965 13523668 ~ 13540301 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other upstream 589717 13609420 ~ 13691340 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other upstream 953179 13972882 ~ 13976511 (-)
G88250 LOC107702476 other upstream 1128344 14148047 ~ 14150005 (-)

Expression


Co-expression Network