hbae5 (LOC107734189,LOC107594227,LOC107692106,LOC107674601,LOC107596827)


Basic Information

Item Value
gene id hbae5
gene name LOC107734189,LOC107594227,LOC107692106,LOC107674601,LOC107596827
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8194223 ~ 8195216 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253164.1
TTTCAGTGTTAACTGGCAGGAGTTCAATCTGACACGCAATTAGTCTGTATCTTGGGTGCGCCCACTCAACTACAAACGCTTAAAAAGAGGACCGATGTTTAGGTGGGCAAGTCATTCGACCCTGGCACGACTGCTCGTTTCGGGCATCGCTTCAGAATGAGTCTCTCCGCTAAAGACAAAGCAATCGTGAAGGCCCTCTGGGCGAAGATCTCCCCAAAGGCTGAGGATATCGGCAACGAGGCGTTGTCCAGAATGCTCTATGTCTACCCTCAGACCAAAACCTACTTCTCTCACTGGAGCGACCTGGCCCCCGGCTCTGCTCCGGTGAGGAAGCACGGAAAGAAGGTCGTCTCTGGAATCGGTTTGGCTGTTGAGAAAATCGACGACCTTTTCGCCGGCCTGCTCACTCTTAGCGAGCTGCATGCCTTTCAGCTGAGGGTCGATCCTGCTAACTTCAAGATCCTTTCCCACAACATCCTCTTGGTGTGCGCCATGCTCTTCCCTAACGACTTCACACCTGAAGCCCACCTGGCCATGGACAAGTTCCTTGCAAGACTGGCCCTGGCTTTGTCTGACAAATATCGTTAACCAGTTTGATGTTTGTCAAGCAGTTTGAATGTTGTTTCGTCGATTTGGCCAACAACATGTCAATAAAAAACTGATCTGGAGACATCGTGCGTTGTGTTCCCTGTCCGTAACCAAATCTAAATCtagcctaaataaataaataaatttagccTACATGCAAAATcgaaaaaatgattttgaataaataatttatagaaaatttc

Function

NR:

description
PREDICTED: hemoglobin subunit alpha-2-like

GO:

id name namespace
GO:0015671 oxygen transport biological_process
GO:0005833 hemoglobin complex cellular_component
GO:0005506 iron ion binding molecular_function
GO:0019825 oxygen binding molecular_function
GO:0005344 oxygen carrier activity molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K13826 HBZ; hemoglobin subunit zeta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253164.1 True 791 mRNA 0.47 3 8194223 8195216

Neighbor

gene id symbol gene type direction distance location
arhgap17a arhgap17a,arhgap17,LOC107594184,LOC107731407,LOC107669196,LOC107584117,LOC107699879,LOC107734204 coding downstream 15116 8155233 ~ 8179107 (-)
zdhhc4 zdhhc4,LOC107734165,LOC107669203,LOC107584218,LOC107594224,LOC107699875,LOC107731390 coding downstream 65204 8126083 ~ 8129019 (-)
LOC122355067 pgp,LOC107584220,LOC107669208,LOC107734160,LOC107731387,LOC107594223,LOC107699876 coding downstream 72133 8120334 ~ 8122090 (-)
bricd5 bricd5,LOC107734175,LOC107731433,LOC107669210,LOC107699874 coding downstream 74413 8115390 ~ 8119810 (-)
tex2l LOC107584119,LOC107669235,LOC107734227 coding downstream 92325 8089481 ~ 8101898 (-)
zgc:163057 zgc:163057,LOC107584216,LOC107734190,LOC107692104,LOC107669180,LOC107594186 coding upstream 8358 8203574 ~ 8205720 (-)
foxj1b foxj1b,LOC107584215,LOC107734171,LOC107669185,LOC107692083,LOC107731389,LOC107554021 coding upstream 67894 8263110 ~ 8266628 (-)
mgrn1a mgrn1a,LOC107734214,LOC107669220,LOC107584113,LOC107554032 coding upstream 72558 8267774 ~ 8278165 (-)
mrtfba LOC107734216,LOC107669223,LOC107584111,LOC107692080,LOC107554034 coding upstream 108551 8303767 ~ 8325041 (-)
ercc4 ercc4,LOC107734247,LOC107669240,LOC107692079 coding upstream 130027 8325243 ~ 8331539 (-)
G86505 LOC107692108,LOC107584217,LOC107734162,LOC107669195,LOC107731388 non-coding downstream 3938 8187641 ~ 8190285 (-)
G86513 NA non-coding downstream 40050 8148747 ~ 8154173 (-)
G86516 NA non-coding downstream 81510 8111193 ~ 8112713 (-)
G86458 NA non-coding downstream 139192 8054768 ~ 8055031 (-)
G86413 NA non-coding downstream 303002 7890303 ~ 7891221 (-)
G86553 NA non-coding upstream 3702 8198918 ~ 8199124 (-)
G86576 NA non-coding upstream 94864 8290080 ~ 8290410 (-)
G86606 NA non-coding upstream 144240 8339456 ~ 8339815 (-)
G86608 NA non-coding upstream 149120 8344336 ~ 8344609 (-)
G86775 NA non-coding upstream 340757 8535973 ~ 8538206 (-)
G86203 NA other downstream 805313 7388236 ~ 7388910 (-)
G86108 NA other downstream 1090005 7103880 ~ 7104218 (-)
G86049 LOC101886504,LOC101886427 other downstream 1522976 6670319 ~ 6671247 (-)
LOC122355418 pnmt,LOC107571312,LOC107676565 other downstream 2116155 6051168 ~ 6078068 (-)
G85930 LOC107711793,LOC107755027 other downstream 2182112 5990913 ~ 6012111 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other upstream 139188 8334404 ~ 8359992 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other upstream 316187 8511403 ~ 8513265 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other upstream 415336 8610552 ~ 8612445 (-)
plbd1b LOC107578697 other upstream 487227 8682443 ~ 8687548 (-)
trnar-ccu_66 NA other upstream 492282 8687498 ~ 8687570 (-)

Expression


Co-expression Network