noxo1b (LOC107669189,LOC107734176,LOC107584122,LOC107699855,LOC107731427,LOC107594217)


Basic Information

Item Value
gene id noxo1b
gene name LOC107669189,LOC107734176,LOC107584122,LOC107699855,LOC107731427,LOC107594217
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8082634 ~ 8085604 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253174.1
TAAATGAGGCTTAGGATGCTGGTGATGCTGAAGAAGAACCAGGAAGAATAGAGTTCATACCGTGATCTCGCTCATCAGAAACCGCTTCAGCTATGAGTGATCCGCGCTTTCCGGTCGACGTCCGACTCATCGGAGTAATGAAGAAAGACAAGGACAAAAAGTTCATGACATCAGTGCTGTGGTCAGACCAGACTGAGTTGATAGTGTACAGATCTTTCCGGGACTTCAAAACGCTCCATAGGCAACTGAAAAAGAAGTTTCCTGTGGAGAATCACTTTCGTAAAGAAGATAGAGTGCTTCCCAGATTTGGAGCCCAGTTCATGGTGACTTCATTTCAGATGAAAGGTTTGGATAAGTCAGTGTCTCGTCTAAGGTATCTGGAGAAGTACTGTTCCAACCTGTTGCAGTGCGACACAACTGTGTCACATTCCACAGACGTTATTCAGTTCTTCTTGCCAACCGAACAGGAGCTCCGACCGGAATATACCCAGAACAGTGTGATGATTCTGCAATCAGACAACATAAACAATGTCAGCGGAGGACCTGAATTGGtgaataaaaatctaaacaatgGCAATGTGTCCCAGCCATTTGTATCCAAGACGTATCGGTGTGTGGCTCCATATGAGACAAAAGATACAAAGAACAGGCCATTTAAAGTAGCTGTGAATGAAAGACTGGATGTGCTGATTAAAGACAAAGCAGGTTGGTGGCTTGTTGAGAATGAAGATAAACGTCTAGCTTGGTTTCCTGCTCCCTACTTGGAGTTATGTGATGAGGAAGGGGAAGAGGAGGATGTTGAAGATGACTTTTATTCCCCAACCTATCAAAGTTCTCTGTACTGCGCTACAAGAAGCTACACCTCAAAAAAAGAGGACGAGATCTCTCTGAGCATCGGTGCTGTTGTGGAGGTGTTACAGAGGTCTGATAATGGCTGGTGGCTTGTTAGATATAACAGAAAGGCCGGGTATGTGCCCTCCATGTACCTGAAGCTCTACAGCAGCCCCAGCTTTGGCCTTCAGACACTCCAGAGGAAACTTCACAGCTCCACTATCAACCTGTCTGCCAGCAACTCTTTCAAACTGGAGCCTCAGGTCCGTTCACGAAACAGAAGGAATAGTTTTCTTAAATCAAACTCTGTGGAAATGCTGTCTGAGCCGGGACAGCATGAGGAAGCTGGCAGCTTCAGCGATGACGGAAACGATTTCAGCTTCAGTTCCTCTGACACCACCTCCATGAGCCCAAGCATGTCCAGCTCAGAGGGGGAAGAGGGCCTGAGACAGCAGGATAAAGAGCCAGAAAGCAACGATAGTGGTATGTCCAGCGGTCAGTCCAGCCCCTCCAGCTCAGACACTGATCACCCAATGAAAGGAGTCGGAGCTCCCAGGGTGCCACCAAGACCTCAGACTCAGGAGATCCTACGTCGCTGCACGACCTACACCCGAAATGTTGCTCTGGCGACCTCTGCACGCCTGGCCCCTGAAAGAGAAATCATGGTACATGGAGGGAGAGCATGAAAGAAGTGCATATGACAATAAGAGACTCTTTCCTTTTCTGCCTTCTTTTTGATCATCTTTGAGCATGATACTACAATATTAATCTTTGTAATCTCTTTGTAATGGGgaaatattaatagtataaatattcaattaatcaaatatattatacataaccTGTTAAGGGTAGTTACAGTGTACATATTTAAAGGgttgtttttcattaatgttGTATTCAGAACTGTTATCTGTAGTCCTGAGCTtccattca
>XM_043253175.1
CTCGCTCATCAGAAACCGCTTCAGCTATGAGTGATCCGCGCTTTCCGGTCGACGTCCGACTCATCGGAGTAATGAAGAAAGACAAGGACAAAGTATGAATATGTTGTATGTGCGCAGGATAACTTGATAACGTACCGAGGCAACTGAAAAAGAAGTTTCCTGTGGAGAATCACTTTCGTAAAGAAGATAGAGTGCTTCCCAGATTTGGAGCCCAGTTCATGGTGACTTCATTTCAGATGAAAGGTTTGGATAAGTCAGTGTCTCGTCTAAGGTATCTGGAGAAGTACTGTTCCAACCTGTTGCAGTGCGACACAACTGTGTCACATTCCACAGACGTTATTCAGTTCTTCTTGCCAACCGAACAGGAGCTCCGACCGGAATATACCCAGAACAGTGTGATGATTCTGCAATCAGACAACATAAACAATGTCAGCGGAGGACCTGAATTGGtgaataaaaatctaaacaatgGCAATGTGTCCCAGCCATTTGTATCCAAGACGTATCGGTGTGTGGCTCCATATGAGACAAAAGATACAAAGAACAGGCCATTTAAAGTAGCTGTGAATGAAAGACTGGATGTGCTGATTAAAGACAAAGCAGGTTGGTGGCTTGTTGAGAATGAAGATAAACGTCTAGCTTGGTTTCCTGCTCCCTACTTGGAGTTATGTGATGAGGAAGGGGAAGAGGAGGATGTTGAAGATGACTTTTATTCCCCAACCTATCAAAGTTCTCTGTACTGCGCTACAAGAAGCTACACCTCAAAAAAAGAGGACGAGATCTCTCTGAGCATCGGTGCTGTTGTGGAGGTGTTACAGAGGTCTGATAATGGCTGGTGGCTTGTTAGATATAACAGAAAGGCCGGGTATGTGCCCTCCATGTACCTGAAGCTCTACAGCAGCCCCAGCTTTGGCCTTCAGACACTCCAGAGGAAACTTCACAGCTCCACTATCAACCTGTCTGCCAGCAACTCTTTCAAACTGGAGCCTCAGGTCCGTTCACGAAACAGAAGGAATAGTTTTCTTAAATCAAACTCTGTGGAAATGCTGTCTGAGCCGGGACAGCATGAGGAAGCTGGCAGCTTCAGCGATGACGGAAACGATTTCAGCTTCAGTTCCTCTGACACCACCTCCATGAGCCCAAGCATGTCCAGCTCAGAGGGGGAAGAGGGCCTGAGACAGCAGGATAAAGAGCCAGAAAGCAACGATAGTGGTATGTCCAGCGGTCAGTCCAGCCCCTCCAGCTCAGACACTGATCACCCAATGAAAGGAGTCGGAGCTCCCAGGGTGCCACCAAGACCTCAGACTCAGGAGATCCTACGTCGCTGCACGACCTACACCCGAAATGTTGCTCTGGCGACCTCTGCACGCCTGGCCCCTGAAAGAGAAATCATGGTACATGGAGGGAGAGCATGAAAGAAGTGCATATGACAATAAGAGACTCTTTCCTTTTCTGCCTTCTTTTTGATCATCTTTGAGCATGATACTACAATATTAATCTTTGTAATCTCTTTGTAATGGGgaaatattaatagtataaatattcaattaatcaaatatattatacataaccTGTTAAGGGTAGTTACAGTGTACATATTTAAAGGgttgtttttcattaatgttGTATTCAGAACTGTTATCTGTAGTCCTGAGCTtccattca

Function

NR:

description
PREDICTED: NADPH oxidase organizer 1-like

GO:

id name namespace
GO:0005737 cytoplasm cellular_component
GO:0016175 superoxide-generating NAD(P)H oxidase activity molecular_function
GO:0035091 phosphatidylinositol binding molecular_function

KEGG:

id description
K17934 NOXO1, SNX28; NADPH oxidase organizer 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253174.1 True 1767 mRNA 0.45 8 8082634 8085604
XM_043253175.1 False 1665 mRNA 0.45 7 8082700 8085604

Neighbor

gene id symbol gene type direction distance location
foxl3 si:dkey-7e14.3,LOC107731394,LOC107594215,LOC107669190,LOC107734180,LOC107584227,LOC108431962 coding upstream 30248 8049576 ~ 8052386 (+)
fam20cb fam20c,fam20cb,LOC107669229,LOC107734234,LOC107699871,LOC105888715,LOC107731385 coding upstream 36595 8009380 ~ 8046039 (+)
LOC122355373 trrap,LOC107669193,LOC107699870,LOC107734152 coding upstream 111080 7902114 ~ 7971554 (+)
tmem130 tmem130,LOC107669166 coding upstream 192147 7886687 ~ 7890487 (+)
bhlha15 bhlha15,LOC107669184,LOC107753453,LOC107584229,LOC107594213,LOC107699868 coding upstream 227796 7851508 ~ 7854838 (+)
rnf151 rnf151,LOC107584225,LOC107669188,LOC107594218,LOC107734173,LOC107731429,LOC107699857 coding downstream 487 8086091 ~ 8089327 (+)
neurl2 neurl2,LOC107669209,LOC107734228,LOC107699858,LOC107594180 coding downstream 17095 8102699 ~ 8105036 (+)
meiob LOC107584223,LOC107669206,LOC107734178,LOC107731419,LOC107594203 coding downstream 21582 8107186 ~ 8110679 (+)
mlst8 mlst8,LOC107699873 coding downstream 25323 8110927 ~ 8115043 (+)
grid2ipb grid2ip,LOC107584118,LOC107734213,LOC107669204,LOC107731383,LOC107699877 coding downstream 45241 8130845 ~ 8154082 (+)
G86460 NA non-coding upstream 22458 8056931 ~ 8060176 (+)
G86374 NA non-coding upstream 235772 7846558 ~ 7846862 (+)
G86268 NA non-coding upstream 358773 7720392 ~ 7723861 (+)
G86283 NA non-coding upstream 363351 7718984 ~ 7719283 (+)
G86275 NA non-coding upstream 380835 7701343 ~ 7701799 (+)
G86540 NA non-coding downstream 112490 8198094 ~ 8198410 (+)
G86536 NA non-coding downstream 117979 8203583 ~ 8204143 (+)
LOC122355856 NA non-coding downstream 118541 8204145 ~ 8206748 (+)
G86577 NA non-coding downstream 206239 8291843 ~ 8292062 (+)
G86593 NA non-coding downstream 259065 8344669 ~ 8344968 (+)
LOC122355675 NA other upstream 238551 7815823 ~ 7844083 (+)
G86143 NA other upstream 774405 7307924 ~ 7308229 (+)
G86142 NA other upstream 777786 7303138 ~ 7304848 (+)
G86029 NA other upstream 1560063 6521829 ~ 6522571 (+)
G86019 LOC107570179 other upstream 1641108 6440821 ~ 6441526 (+)
msrb1b msrb1b,LOC100705913 other downstream 19544 8105148 ~ 8106780 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other downstream 110360 8195964 ~ 8197904 (+)
arsg arsg,LOC107734203,LOC107660857,LOC107692046,LOC107554066 other downstream 750844 8836448 ~ 8852449 (+)
pkd1b LOC107723630,LOC107665861,LOC107556563 other downstream 1200059 9285663 ~ 9306831 (+)
mfsd8 mfsd8,LOC107738985,LOC107556570 other downstream 1571065 9656669 ~ 9664139 (+)

Expression


Co-expression Network