habp2 (LOC107684127,LOC107722212,LOC107581633)


Basic Information

Item Value
gene id habp2
gene name LOC107684127,LOC107722212,LOC107581633
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13968509 ~ 13972650 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253196.1
AAGGGTCCAGGGGTTGTTCATATACAGGTCAGCGTATCTACTAGACAGGGGACTTCTGTGTTTGTTGCACTGCGACTTTTATTCCTGAAATCATGTTTCCAGTGATTCTGCTTCTGATGGGCCTTTCTGGCCTCGCTTTGCCAGTCCAAGCAGCAACGGGTCTATTGGATGACATTTTCGGTTTAGTTGATGAAATATTTGACTATGCTGTTAATGACAACACAGAGGAAATATCTTCAGCTGAAATCAATGAAACTATCGATtggattttttcctttttcgaTGAACCAGAAGTGTGTGATCCAAATCCATGCCAAAACAACGGAGTGTGCGAGGTTCTTGAGAGCGGTGGCTTCAAATGCATCTGTAAAGAGCCTTACATTGGAAAAAAGTGTCAGGATGAGAGGAACTTTTGTAAGAAAGTGAAGTGCGGTCATGGTGATTGTGTCAGAACTCAAGAGGCCCCGTTTTATGAATGCAAATGTCACCCTCCCTATAAGGCCCCTGAGTGCAAAAAAGCCTCTGCTTGCAAGCCGAGTCCATGCCTGAATGGAGGAAAGTGTGTTAAAGGCCGAACCAGATCCAGATTCACATGCAAATGTCCTGAAACTTACAGTGGGAGGTTCTGCCAAGTCGGTCCAAATGATTGCTATGAGGGGAACGGGGAGTCGTACAGAGGTTTTGTCAGTGAGACAGTGGAAGAAACTGAATGTTTACCGTGGAACTACTATCTTATACCTTCAAATGAGTTTAAAGGGAACGAGAGCATTGGAGCCCACAATTACTGCAGAAATCCGGATGGAGACCGGGAACCCTGGTGCTTTGTGAAAGACAAGGGCAGTCTTCGGTGGGACTACTGTAACGTCAAGCTATGCTCTACACCAGAACCGGCAAAACCTTCAACAACCCCTGCAAAACTGCAGTTCTCTGAATGTGGAAAGACTCAGGCTAGTATGATATCTCCGAGGATATTTGGTGGGAGGAAGTCTCTGCCTGAAGCCCATCCCTGGCAGGTCTCGTTTCAGAACCGCCCCATGGGTTCTAATGCATCATTCAGTCACAGCTGTGGAGGAACCCTAATTGACTCCTGCTGGGTCCTAACTGCTGCTCACTGCATCGATGAGAACGAGGAGGTGAGGTTGGAGATGGGTGGTGTGAACCTGAAGAAAGATGATCCTGCAAAACAGTTTCTTGAGGTGGAGAAAATCATTGTTCACGAGAACTACACAGAGACTCCTCAAGCCCTGTATAACGATATAGCACTGTTGAAATTAAAGGCAATAAATGGGCGGTGTGCCAATGAGACCAGGTCTGTTAAGGCAGCCTGTCTCCCCAATGATTCATTCCCTGATGGAACACTTTGCACAATATCAGGCTATGGAACAACTGAGAAAGAGGATGCCGTCTCTCCTCAGCTGCTGGACGCCAAAGTTCTCTTAATCTCTCAGAAGCGTTGTATGTCTCGTAATGTTTATGAGAACAGACTGGATGATTCCATGATGTGTGCTGGATATATGCAGGGAAAGACTGACTCTTGTCAGGGTGACTCTGGTGGACCCCTTGTTTGTCAGAAGGATGAGACTCATTACATCTATGGTGTTGTGAGTTGGGGTGACAGCTGTGGAAAGAAGAACAGGCCTGGAATATATGCCCGTGTCACCAAGTTCATGGACTGGATCAATGAAAAGATGCATACATCTTAGGATGGCTACTTCCAAGGTTTGAGTTTAACGATCTAATATCTGAAAGAGTTTACCTAAATAAACCAATTTACAACTGATGTAAAAAATTAGagatctacaaaaaaaaaaaaagtccaattaGTTACCAAGGGTGTAACAATATCGGTTTCTAATCGTTCTAAATTAAAAACTggattaaattttaaaatgtgcacaCAAATCAGAAGGAAAATAAACTTGAGTTTGAAGGAGTGAGGTTAAGTAGA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K08648 HABP2; hyaluronan binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253196.1 True 1948 mRNA 0.44 13 13968509 13972650

Neighbor

gene id symbol gene type direction distance location
LOC122355687 dnmbp,LOC107755522,LOC107702462,LOC107722208,LOC107684043,LOC107566369 coding upstream 852 13925760 ~ 13967657 (+)
cpn1 cpn1,LOC107722209,LOC107684044,LOC107702463,LOC107755523 coding upstream 45823 13914176 ~ 13922686 (+)
gpam gpam,LOC107702461,LOC107566297,LOC107755524,LOC107581571,LOC107722223 coding upstream 74436 13873018 ~ 13894073 (+)
zdhhc6 zdhhc6,LOC107755527,LOC107684040,LOC107722226,LOC107702458 coding upstream 122420 13839483 ~ 13846089 (+)
aldh18a1 aldh18a1,LOC107755531,LOC107707764,LOC107684039,LOC107702454 coding upstream 417280 13541318 ~ 13551229 (+)
LOC122355878 LOC107755407,LOC107566757,LOC107702425,LOC107722184 coding downstream 21018 13993668 ~ 13997063 (+)
lrrc59 lrrc59,LOC107755517,LOC107684048,LOC107722190,LOC107581574 coding downstream 24656 13997306 ~ 14000327 (+)
hlfb hlf,LOC107566512,LOC107702475,LOC107581580,LOC107684053,LOC107722239 coding downstream 164015 14136665 ~ 14142072 (+)
ankfn1 ankfn1,LOC107702427,LOC107684130,LOC107722232 coding downstream 210932 14183582 ~ 14215651 (+)
nog3 nog,nog3,LOC107702438,LOC107566874,LOC107722200,LOC107684148,LOC107581671 coding downstream 250294 14222944 ~ 14224109 (+)
G88111 NA non-coding upstream 251377 13715584 ~ 13717132 (+)
G88106 NA non-coding upstream 258270 13710004 ~ 13710239 (+)
G88079 NA non-coding upstream 388218 13580078 ~ 13580291 (+)
G88063 NA non-coding upstream 428486 13539789 ~ 13540023 (+)
G88062 NA non-coding upstream 430421 13536166 ~ 13538088 (+)
G88207 LOC107702472,LOC107581578,LOC107566485,LOC107722231,LOC108443562,LOC103039554,LOC107684050 non-coding downstream 55776 14028426 ~ 14090868 (+)
G88238 NA non-coding downstream 170063 14142713 ~ 14218976 (+)
G88270 enpp7.1,LOC107755405,LOC107684149,LOC107722193,LOC107581672,LOC107755509 non-coding downstream 260862 14233512 ~ 14243310 (+)
G88269 enpp7.1,LOC107684149,LOC107722193,LOC107755405,LOC107581672,LOC107702441 non-coding downstream 264763 14237413 ~ 14238303 (+)
LOC122355796 NA non-coding downstream 272702 14245352 ~ 14267029 (+)
LOC122355339 LOC107702424 other upstream 63882 13894361 ~ 13904627 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other upstream 103766 13855695 ~ 13864743 (+)
G88082 NA other upstream 372161 13595794 ~ 13596348 (+)
G88016 NA other upstream 523594 13441943 ~ 13444915 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other upstream 1205778 12760374 ~ 12762731 (+)
rnf157 rnf157,si:dkey-49c17.3,LOC107702467,LOC107755520,LOC107684047,LOC107722211 other downstream 5521 13978171 ~ 13993044 (+)
stxbp4 stxbp4,LOC107702473,LOC107581670 other downstream 133306 14105956 ~ 14131785 (+)
sfxn2 sfxn2,timp2a,LOC107755483,LOC107722238,LOC107581595,LOC107690949,LOC107565802,LOC107755484,LOC107684079,LOC103024286 other downstream 957429 14930079 ~ 14940191 (+)
si:dkey-21c1.4 LOC107755475,LOC107576597,LOC107690918 other downstream 1334776 15307426 ~ 15312004 (+)
qki2 qki2,LOC108426533,LOC107755469,LOC107690925,LOC107601430,LOC103029551 other downstream 1373895 15346545 ~ 15378101 (+)

Expression


Co-expression Network