si:ch211-141o9.10 (si:ch211-141o9.10,LOC107690061,LOC107584211,LOC107734185,LOC107584178,LOC108431982,LOC107089545)


Basic Information

Item Value
gene id si:ch211-141o9.10
gene name si:ch211-141o9.10,LOC107690061,LOC107584211,LOC107734185,LOC107584178,LOC108431982,LOC107089545
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8568778 ~ 8573399 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253206.1
TTTTGACCTTCAATATTAAAAGTCCAATAACTCTTTAATTAGTAGtttctataataaaaattaacagtTTACTTTACTGGTCTAGCAGTTTTTGCATGGTTGTTCTTTGCGCGCATAAGAAAAATATGGCCCCACTAAAACAAGgcaagaagaaaagaaagacagaggagGCTCCTGAAACAAAGGAACTACATTCTGATGCAGAACCATCAGATGGCAGcagcagagaagaaaaaatggCACGAAAAAGGAGTATAAAGCCAAGGACAAAATACATAGGCGCTCATGTCTCAATATCAGgaGGAATATGGAAAGCAGTCGACTCAAGTGTGGCCATGGGAGGTCATGCTTTTGCCCTTTTCATGGGCTCTCAGCGATCCTGGACGAGACCAGCCCTTGATACAGCAGCCGCAGTTAAATTTCAAGAAGCCTGTGCTCAACATGGTTTTGATCCGATACACATCCTGCCACATGGATCTTATTTGATGAACTGCGGTTCCCCCAAAGAAGACGTGTTCAATAAGAGCCAGGCCATGCTTGTGGATGAACTGAGTCGCTGCAGTGCACTGGGCCTCAGCCAGTTTAACTTTCACCCTGGAGCTTCTATAGACTCCACCCCTGAGAAATGCATGGAGAAAATTGCCCAAGCTATTAACCACGCACACCAGCAAACCCCTGCTGTCATTACAGTACTTGAAAACATGAGTGGTCAGGGCAGCACTATAGGTGGACAGTTCAGTGAACTGAGAAGCATAATAGACCAGGTGCGTGACAAGACACGTGTTGGGGTGTGTCTGGACACTTGCCATGCTTTTGCAGCAGGTTACGACATTTCACCTCCTGAAGGAGTGAAGAATATACTTGATGAATTTGATCGTGTGGTTGGGTTGCATTATTTGAGAGCTGTTCATCTAAACGACTCCAAAGgaaaattagGCTGCCATCTGGACCGCCATGAAGACATTGGATGTGGCCAAATCGGCATTACTGCTTTCCGAGAAATTGTTAATGAGCCTCGACTGGATAATATCCCTCTGATTCTAGAAACACCTGGTCGCCCAGGTTTTGAGTATGCTGAACAGATAGAGCTCCTTTACTCCTTTTGTGAAGAAAAGAAGTATTAGACGTCTGCTCAGTGCCGTCTTCCATGCTGGAGTTAATATTGCtgaagcataataaaaatgtcctgttcaaa
>XM_043253207.1
TTATCTAAGTACGCTTGAGCAAATATCTGGAAAATGTACGATTTTGTGGAGTATCACCTTCAACCAGTCCAGACAAGAGGTGCTGCCTTGTTACCAAACCAAATGCATAACAGCCTGAGACACAACAGCGGCACCAAACACATGATCATGATATCACAAATCACTGTATATGTAACATCAATGGTATGCTGTTCTAGGCGCAGCCTGAGTTCGCATATGCCGCGAATTAAAAGTTATGCCTATTAAAATCATACATGATCTTCTTTATGGGAGAAACTCCTGCTGCTAtccgtctgtgagcctgcagtTGGCAGGGCAGAGTTGTCGGACAGAGGGGCTCCCTTCACCCGCCCATTTCCTTCGGTGCAATATATGATATAACATACATTCCATACGTCAGCTATTCGAACGATTCGTGCAAAAACAAGCATCAAAGCGAGTGTTTAACGGCAAAAACTGAATTAGTGAGTTAAGTCGTATGCTTTTGTGGTTCTGACAAACTCGGATGCATGTTACCGAGTTAGCTAGTTTGTTAGCAAGTGAAATTGACACATAAACGTAAATCTTAGGTAGTTTTGTTAAATCCCCCCCAAATCCGCCGATTGTTTGCATACGGatcacaagaaaaaacaaaaggAAAAATATGGCCCCACTAAAACAAGgcaagaagaaaagaaagacagaggagGCTCCTGAAACAAAGGAACTACATTCTGATGCAGAACCATCAGATGGCAGcagcagagaagaaaaaatggCACGAAAAAGGAGTATAAAGCCAAGGACAAAATACATAGGCGCTCATGTCTCAATATCAGgaGGAATATGGAAAGCAGTCGACTCAAGTGTGGCCATGGGAGGTCATGCTTTTGCCCTTTTCATGGGCTCTCAGCGATCCTGGACGAGACCAGCCCTTGATACAGCAGCCGCAGTTAAATTTCAAGAAGCCTGTGCTCAACATGGTTTTGATCCGATACACATCCTGCCACATGGATCTTATTTGATGAACTGCGGTTCCCCCAAAGAAGACGTGTTCAATAAGAGCCAGGCCATGCTTGTGGATGAACTGAGTCGCTGCAGTGCACTGGGCCTCAGCCAGTTTAACTTTCACCCTGGAGCTTCTATAGACTCCACCCCTGAGAAATGCATGGAGAAAATTGCCCAAGCTATTAACCACGCACACCAGCAAACCCCTGCTGTCATTACAGTACTTGAAAACATGAGTGGTCAGGGCAGCACTATAGGTGGACAGTTCAGTGAACTGAGAAGCATAATAGACCAGGTGCGTGACAAGACACGTGTTGGGGTGTGTCTGGACACTTGCCATGCTTTTGCAGCAGGTTACGACATTTCACCTCCTGAAGGAGTGAAGAATATACTTGATGAATTTGATCGTGTGGTTGGGTTGCATTATTTGAGAGCTGTTCATCTAAACGACTCCAAAGgaaaattagGCTGCCATCTGGACCGCCATGAAGACATTGGATGTGGCCAAATCGGCATTACTGCTTTCCGAGAAATTGTTAATGAGCCTCGACTGGATAATATCCCTCTGATTCTAGAAACACCTGGTCGCCCAGGTTTTGAGTATGCTGAACAGATAGAGCTCCTTTACTCCTTTTGTGAAGAAAAGAAGTATTAGACGTCTGCTCAGTGCCGTCTTCCATGCTGGAGTTAATATTGCtgaagcataataaaaatgtcctgttcaaa
>XM_043253208.1
TTTATCTAAGTACGCTTGAGCAAATATCTGGAAAATGTACGATTTTGTGGAGTATCACCTTCAACCAGTCCAGACAAGAGGTGCTGCCTTGTTACCAAACCAAATGCATAACAGCCTGAGACACAACAGCGGCACCAAACACATGATCATGATATCACAAATCACTGTATATGTAACATCAATGGTATGCTGTTCTAGGCGCAGCCTGAGTTCGCATATGCCGCGAATTAAAAGTTATGCCTATTAAAATCATACATGATCTTCTTTATGGGAGAAACTCCTGCTGCTAtccgtctgtgagcctgcagtTGGCAGGGCAGAGTTGTCGGACAGAGGGGCTCCCTTCACCCGCCCATTTCCTTCGGTGCAATATATGATATAACATACATTCCATACGTCAGCTATTCGAACGATTCGTGCAAAAACAAGCATCAAAGCGAGTGTTTAACGGCAAAAACTGAATTAGTGAGTTAAGTCGTATGCTTTTGTGGTTCTGACAAACTCGGATGCATGTTACCGAGTTAGCTAGTTTGTTAGCAAGTGAAATTGACACATAAACGTAAATCTTAGGTAGTTTTGTTAAATCCCCCCCAAATCCGCCGATTGTTTGCATACGGatcacaagaaaaaacaaaaggtttttgctcTTGTGATCTCTTGGGATCCCTGAATTCAAGTTTGAAGTGAAAAATATGGCCCCACTAAAACAAGgcaagaagaaaagaaagacagaggagGCTCCTGAAACAAAGGAACTACATTCTGATGCAGAACCATCAGATGGCAGcagcagagaagaaaaaatggCACGAAAAAGGAGTATAAAGCCAAGGACAAAATACATAGGCGCTCATGTCTCAATATCAGgaGGAATATGGAAAGCAGTCGACTCAAGTGTGGCCATGGGAGGTCATGCTTTTGCCCTTTTCATGGGCTCTCAGCGATCCTGGACGAGACCAGCCCTTGATACAGCAGCCGCAGTTAAATTTCAAGAAGCCTGTGCTCAACATGGTTTTGATCCGATACACATCCTGCCACATGGATCTTATTTGATGAACTGCGGTTCCCCCAAAGAAGACGTGTTCAATAAGAGCCAGGCCATGCTTGTGGATGAACTGAGTCGCTGCAGTGCACTGGGCCTCAGCCAGTTTAACTTTCACCCTGGAGCTTCTATAGACTCCACCCCTGAGAAATGCATGGAGAAAATTGCCCAAGCTATTAACCACGCACACCAGCAAACCCCTGCTGTCATTACAGTACTTGAAAACATGAGTGGTCAGGGCAGCACTATAGGTGGACAGTTCAGTGAACTGAGAAGCATAATAGACCAGGTGCGTGACAAGACACGTGTTGGGGTGTGTCTGGACACTTGCCATGCTTTTGCAGCAGGTTACGACATTTCACCTCCTGAAGGAGTGAAGAATATACTTGATGAATTTGATCGTGTGGTTGGGTTGCATTATTTGAGAGCTGTTCATCTAAACGACTCCAAAGgaaaattagGCTGCCATCTGGACCGCCATGAAGACATTGGATGTGGCCAAATCGGCATTACTGCTTTCCGAGAAATTGTTAATGAGCCTCGACTGGATAATATCCCTCTGATTCTAGAAACACCTGGTCGCCCAGGTTTTGAGTATGCTGAACAGATAGAGCTCCTTTACTCCTTTTGTGAAGAAAAGAAGTATTAGACGTCTGCTCAGTGCCGTCTTCCATGCTGGAGTTAATATTGCtgaagcataataaaaatgtcctgttcaaa
>XM_043253210.1
TTTATCTAAGTACGCTTGAGCAAATATCTGGAAAATGTACGATTTTGTGGAGTATCACCTTCAACCAGTCCAGACAAGAGGTGCTGCCTTGTTACCAAACCAAATGCATAACAGCCTGAGACACAACAGCGGCACCAAACACATGATCATGATATCACAAATCACTGTATATGTAACATCAATGGTATGCTGTTCTAGGCGCAGCCTGAGTTCGCATATGCCGCGAATTAAAAGTTATGCCTATTAAAATCATACATGATCTTCTTTATGGGAGAAACTCCTGCTGCTAtccgtctgtgagcctgcagtTGGCAGGGCAGAGTTGTCGGACAGAGGGGCTCCCTTCACCCGCCCATTTCCTTCGGTGCAATATATGATATAACATACATTCCATACGTCAGCTATTCGAACGATTCGTGCAAAAACAAGCATCAAAGCGAGTGTTTAACGGCAAAAACTGAATTAAAAAATATGGCCCCACTAAAACAAGgcaagaagaaaagaaagacagaggagGCTCCTGAAACAAAGGAACTACATTCTGATGCAGAACCATCAGATGGCAGcagcagagaagaaaaaatggCACGAAAAAGGAGTATAAAGCCAAGGACAAAATACATAGGCGCTCATGTCTCAATATCAGgaGGAATATGGAAAGCAGTCGACTCAAGTGTGGCCATGGGAGGTCATGCTTTTGCCCTTTTCATGGGCTCTCAGCGATCCTGGACGAGACCAGCCCTTGATACAGCAGCCGCAGTTAAATTTCAAGAAGCCTGTGCTCAACATGGTTTTGATCCGATACACATCCTGCCACATGGATCTTATTTGATGAACTGCGGTTCCCCCAAAGAAGACGTGTTCAATAAGAGCCAGGCCATGCTTGTGGATGAACTGAGTCGCTGCAGTGCACTGGGCCTCAGCCAGTTTAACTTTCACCCTGGAGCTTCTATAGACTCCACCCCTGAGAAATGCATGGAGAAAATTGCCCAAGCTATTAACCACGCACACCAGCAAACCCCTGCTGTCATTACAGTACTTGAAAACATGAGTGGTCAGGGCAGCACTATAGGTGGACAGTTCAGTGAACTGAGAAGCATAATAGACCAGGTGCGTGACAAGACACGTGTTGGGGTGTGTCTGGACACTTGCCATGCTTTTGCAGCAGGTTACGACATTTCACCTCCTGAAGGAGTGAAGAATATACTTGATGAATTTGATCGTGTGGTTGGGTTGCATTATTTGAGAGCTGTTCATCTAAACGACTCCAAAGgaaaattagGCTGCCATCTGGACCGCCATGAAGACATTGGATGTGGCCAAATCGGCATTACTGCTTTCCGAGAAATTGTTAATGAGCCTCGACTGGATAATATCCCTCTGATTCTAGAAACACCTGGTCGCCCAGGTTTTGAGTATGCTGAACAGATAGAGCTCCTTTACTCCTTTTGTGAAGAAAAGAAGTATTAGACGTCTGCTCAGTGCCGTCTTCCATGCTGGAGTTAATATTGCtgaagcataataaaaatgtcctgttcaaa
>XM_043253211.1
TTTTGACCTTCAATATTAAAAGTCCAATAACTCTTTAATTAGTAGtttctataataaaaattaacagtTTACTTTACTGGTCTAGCAGTTTTTGCATGGTTGTTCTTTGCGCGCATAAGAAAAATATGGCCCCACTAAAACAAGgcaagaagaaaagaaagacagaggagGCTCCTGAAACAAAGGAACTACATTCTGATGCAGAACCATCAGATGGCAGcagcagagaagaaaaaatggCACGAAAAAGGAGTATAAAGCCAAGGACAAAATACATAGGCGCTCATGTCTCAATATCAGgaGGAATATGGAAAGCAGTCGACTCAAGTGTGGCCATGGGAGGTCATGCTTTTGCCCTTTTCATGGGCTCTCAGCGATCCTGGACGAGACCAGCCCTTGATACAGCAGCCGCAGTTAAATTTCAAGAAGCCTGTGCTCAACATGGTTTTGATCCGATACACATCCTGCCACATGGATCTTATTTGATGAACTGCGGTTCCCCCAAAGAAGACGTGTTCAATAAGAGCCAGGCCATGCTTGTGGATGAACTGAGTCGCTGCAGTGCACTGGGCCTCAGCCAGTTTAACTTTCACCCTGGAGCTTCTATAGACTCCACCCCTGAGAAATGCATGGAGAAAATTGCCCAAGCTATTAACCACGCACACCAGCAAACCCCTGCTGTCATTACAGTACTTGAAAACATGAGTGGTCAGGGCAGCACTATAGGTGGACAGTTCAGTGAACTGAGAAGCATAATAGACCAGGTGCGTGACAAGACACGTGTTGGGGTGTGTCTGGACACTTGCCATGCTTTTGCAGCAGGTTACGACATTTCACCTCCTGAAGGAGTGAAGAATATACTTGATGAATTTGATCGTGTGGTTGGGTTGCATTATTTGAGAGCTGTTCATCTAAACGACTCCAAAGgaaaattagGCTGCCATCTGGACCGCCATGAAGACATTGGATGTGGCCAAATCGGCATTACTGCTTTCCGAGAAATTGTTAATGAGCCTCGACTGGATAATATCCCTCTGATTCTAGAAACACCTGGTCGGTTTTGAGTATGCTGAACAGATAGAGCTCCTTTACTCCTTTTGTGAAGAAAAGAAGTATTAGACGTCTGCTCAGTGCCGTCTTCCATGCTGGAGTTAATATTGCtgaagcataataaaaatgtcctgttcaaa

Function

symbol description
si:ch211-141o9.10 Predicted to enable DNA-(apurinic or apyrimidinic site) endonuclease activity and phosphoric diester hydrolase activity. Predicted to be involved in base-excision repair. Predicted to act upstream of or within DNA repair. Predicted to be active in mitochondrion and nucleus.

NR:

description
PREDICTED: probable endonuclease 4

GO: NA

KEGG:

id description
K01151 nfo; deoxyribonuclease IV

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253206.1 False 1195 mRNA 0.44 8 8570130 8573399
XM_043253207.1 False 1713 mRNA 0.44 8 8568779 8573399
XM_043253208.1 True 1762 mRNA 0.44 9 8568778 8573399
XM_043253210.1 False 1541 mRNA 0.45 8 8568778 8573399
XM_043253211.1 False 1190 mRNA 0.44 8 8570130 8573399

Neighbor

gene id symbol gene type direction distance location
maff maff,LOC107690056,LOC107584105,LOC107692071,LOC107554043,LOC107731405,LOC107734233 coding upstream 27607 8535986 ~ 8541171 (+)
shisa9a shisa9a,LOC107584108,LOC107734251,LOC107669237,LOC107554036,LOC107692077,LOC107731434 coding upstream 180450 8361185 ~ 8388328 (+)
LOC122355370 NA coding upstream 265237 8292736 ~ 8303541 (+)
ubald1a ubald1a,ubald1,LOC107734217,LOC107669224,LOC107731421,LOC107554033 coding upstream 280009 8279068 ~ 8288769 (+)
rhbdf1b LOC107734220,LOC107731426,LOC107584114,LOC107692086,LOC107669219,LOC107594190 coding upstream 325521 8215566 ~ 8243257 (+)
cdc42ep1a LOC107584101,LOC107690062,LOC107734237,LOC107692066,LOC107554048,LOC107731423 coding downstream 10119 8583518 ~ 8592029 (+)
zc3h7bb LOC107690064,LOC107692064,LOC107734154,LOC107554050 coding downstream 39940 8613339 ~ 8626327 (+)
tefa LOC107584098,LOC107734194,LOC107663181 coding downstream 55228 8628627 ~ 8634070 (+)
aco2 aco2,LOC107734200,LOC107584097,LOC107731401,LOC107554054,LOC107692062,LOC108273913 coding downstream 67251 8640650 ~ 8649914 (+)
csdc2a csdc2a,csdc2,LOC107584207,LOC107731402,LOC107554055,LOC105919973 coding downstream 76932 8650331 ~ 8652780 (+)
G86593 NA non-coding upstream 223810 8344669 ~ 8344968 (+)
G86577 NA non-coding upstream 276716 8291843 ~ 8292062 (+)
LOC122355856 NA non-coding upstream 362030 8204145 ~ 8206748 (+)
G86536 NA non-coding upstream 364635 8203583 ~ 8204143 (+)
G86540 NA non-coding upstream 370368 8198094 ~ 8198410 (+)
G86713 LOC107578697 non-coding downstream 108990 8682389 ~ 8686117 (+)
G86756 NA non-coding downstream 299928 8873327 ~ 8873545 (+)
G86758 NA non-coding downstream 301716 8875115 ~ 8875455 (+)
G86943 NA non-coding downstream 908186 9481585 ~ 9487179 (+)
G86959 LOC107657285,LOC107733473,LOC107738963,LOC107665891 non-coding downstream 1022894 9596293 ~ 9600682 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other upstream 370874 8195964 ~ 8197904 (+)
msrb1b msrb1b,LOC100705913 other upstream 461998 8105148 ~ 8106780 (+)
LOC122355675 NA other upstream 724695 7815823 ~ 7844083 (+)
G86143 NA other upstream 1260549 7307924 ~ 7308229 (+)
G86142 NA other upstream 1263930 7303138 ~ 7304848 (+)
arsg arsg,LOC107734203,LOC107660857,LOC107692046,LOC107554066 other downstream 263049 8836448 ~ 8852449 (+)
pkd1b LOC107723630,LOC107665861,LOC107556563 other downstream 712264 9285663 ~ 9306831 (+)
mfsd8 mfsd8,LOC107738985,LOC107556570 other downstream 1083270 9656669 ~ 9664139 (+)
LOC122355274 shisa9a,LOC107584108,LOC107734251,LOC107669237,LOC107554036,LOC107731434,LOC107692077 other downstream 1183848 9757247 ~ 9767228 (+)
LOC122355252 fam20cl,LOC107741571,LOC107664989,LOC107570372,LOC108436593,LOC102782963,LOC108259419 other downstream 1291415 9864814 ~ 9874515 (+)

Expression


Co-expression Network