dbf4b (LOC107556759,LOC107727974,LOC107674674)


Basic Information

Item Value
gene id dbf4b
gene name LOC107556759,LOC107727974,LOC107674674
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 5602681 ~ 5613207 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253254.1
TTCAGGAGGGCCATTTGAAAAGGTTCGCAGAGCGAGGCGGCacgttatatttatattgcctGTATTAACTATAAGATTGAGGATGTTTTAATACAACCGTTAGCGCGATATTTTTATTGACAGCGTATGCGCCAAGGACCTCAagTTTCAGTTCAAATAATGGCTGGAGAACATTCAGGTGTTTTGAGGGGCAAATCCTTCTACCTCCATGACTTGAAGAGACATCAGTCCGTCACACTCACTGACATCATCAGCCGACTGGGAGGGAAAGTAGACAGTTTTCTCACCAAGGATGTGAATGTGGTTGTGACGGGCATTAAAGCACCTCATCTGCAGATGGATGGTTCATGTACTGCAGAGGGAAACCAAACTGGAACTCCCAAACCTCTGGTTTGTGGCAGTCGTGGAAAAGCATTACTGGAAAAAGCAATCCACAGCAATaagTATCAGAGCAGTGTGTTGGCTAATGCTCGTTCCTGGGGAGTCAAAGTCTACAATGTTGACGaatttcTAAAGTTCATCAATCATCTAAATCAGAAAATGAAGACAGCTAAGaaaaaaagaagcaaactaACAACTCCTCATGTTAAAGCTGGAGTCTTGAGAGGTCCTTACCTGAAAGTGGAGGACTCAAGTCGGAAATTCAGACCATACTATGCACAGACTCTGAGTTTCCCAGTGGTGAGTTTCTCAGGAAAATTTAGCCCTTTTGAGCCCCTTATTCCTCGGCAGTCTAGTAGAAGTAAAGAAGTAGATTCCAGCAAGGATAATCTCAGgAAGAAGGAAGACACTACTAGCAGCTGCAATAAGTTGCAAGCACCACATAATGCAAGTGCCACACACAGAGGCCCAACTAAAAAAAGTTCAGGCTATTGCGAGTGCTGCCACATCGTCTACAAAGACCAGTATGAGcacttGCAGTCTGAAATGCATCGTTCTTTCATTCAAAATGACAGTAACTATGCTGTAGTAGACCAACTAACAGCTGCTATGGTTGCTAGCTTTGTTTATAATCTAAATCTAGAAGTGGATCCAACGCTGATCAAGTCATCAACAGGCTTCTCTCACTTCCAACTGAGTAATTCAACTGCAATGGTGCCGAATTCTGTCAGCGAAAATGAAAAATCTCTCCAGAATTCCCTTGTTCAAGAATGTGATTGTCTACCGGCAAATACTGACAACAAGGCACACCCCATTCCTAAACCTATCCAGAGTACACATGGTCAACAAAATGCAACCTTGCATCATACAATGCAGAAAAACTCTCCAGATGCTCTTGACAATGTCAAATTAGGCTTTTACATCAGCTGCACCACAAAGGTTCAGGACTTTCAATCTGGTGTTCTCTGCATGGATATAGTCCCACATAACATTTTTCCAAAATCCCAGACAGTAGAGAAGAAATCCAAGACCCCATCTTCTGTCACACCCTCAGACACTCCTTGTAAAATGCTCATGCAAAGCTCTTCTGGAGACAACAAAATCCCACACACCATCACTGGTGATAAAGTTCCTGGACCTCAGGAACGATGTGAAGGTGGTCATGATCTACATGTACTGCATATGCAAAGTGGTCTTATAGGTGGAGTTCCTAACACGGTCAACtctcaaaaactaaaatatgattgGGATCAAGGTTTAAAAATTTGCTCAAACAGCCCTAAGATGTTGCTCCAGCAAGGTGGAGATGGTAATTCTGAAAGTTGTGGCCAGAATATGTTGGACCATAGAAAGTTGCCTTCAACGAAACAGTCACTGAAATTTACTGAAGTCACTGAAAGTCCCGAGTTTGGCATCTTTTCAATACCACGTTTTTTACCATTTCCACACTTGTCAGATTACCCATTTTCTATAGTTAACTTAAAAAAGCGCTGCAGGTCCTTCACTCCAAGTCCAAAACTTGCTAAGAGAAGAAAGACTAGTCAAAGTGAAAAGTCAAACCCAATTCAGGGGGTTTGCAGTGCTAACTTTATAAGACAGTACTCATCTGTATTTTCCACCATGTCATGTTTACCAGTCTCCATGGTGGGCTTTGCAACAGAGATTCATAATCGAACTGGGGGTAGCATACTACCAAACCATGAGTCAACACTTGTGAATCAGATTCCTACAAGGCCtcctctaaaatattttactccTAGTACCCACTGTTTGCCTTATCAGGTTGACCAACAGGACAGTGCTGCAAAGCAGCATGATTTGTGTCCAGTGGAATCCCGAATAACCACTTGCTCATCTGATTTGGACCCTCCTAAGTTGGTTCCTTTTTTCCATGAAGATCAATATCAACGCCATCAGTTTCATGATCCTCCAGAACTGTTACCCTTTTTTTTCCAGACCCCTGAAGATACTTCCCATACATCAGTCAGTAAAGCTCCAAACAGCTCTTTCCTGTCACACTCCGGAGCCTCTGTTTGCATTGAATCTGCTCTTCTTCCTAACCTCACGTGGTCCACGGCCTCTTCTGAGTCGGATTGGGATTCTGGTCTCTTGTCATGGTTTACGGCTGGAGTTCCTCTTCAGGCTAAAGGGGGACATGATGACCTGGGTTTGTTATTACAAAAGCCACATACTGGCATGCAGGATGGGAGCTATACATCACGGTTGTGCTCCATACTGCAACCCTCTTGACTATCGTAATTGGGATCGAAGTTGCATCAATCTGAAACTTCTGCAAACTTCATTTTTTACTTCTACAATTagattaaagaaatagttcacccaatacTTAAAATTCCgtcatcaattactcaccctcaattagttccaaacctgtatgaatttctttgttctgccaaacac
>XM_043253255.1
TTCAGGAGGGCCATTTGAAAAGGTTCGCAGAGCGAGGCGGCacgttatatttatattgcctGTATTAACTATAAGATTGAGGATGTTTTAATACAACCGTTAGCGCGATATTTTTATTGACAGCGTATGCGCCAAGGACCTCAagTTTCAGTTCAAATAATGGCTGGAGAACATTCAGGTGTTTTGAGGGGCAAATCCTTCTACCTCCATGACTTGAAGAGACATCAGTCCGTCACACTCACTGACATCATCAGCCGACTGGGAGGGAAAGTAGACAGTTTTCTCACCAAGGATGTGAATGTGGTTGTGACGGGCATTAAAGCACCTCATCTGCAGATGGATGGTTCATGTACTGCAGAGGGAAACCAAACTGGAACTCCCAAACCTCTGGTTTGTGGCAGTCGTGGAAAAGCATTACTGGAAAAAGCAATCCACAGCAATaagTATCAGAGCAGTGTGTTGGCTAATGCTCGTTCCTGGGGAGTCAAAGTCTACAATGTTGACGaatttcTAAAGTTCATCAATCATCTAAATCAGAAAATGAAGACAGCTAAGaaaaaaagaagcaaactaACAACTCCTCATGTTAAAGCTGGAGTCTTGAGAGGTCCTTACCTGAAAGTGGAGGACTCAAGTCGGAAATTCAGACCATACTATGCACAGACTCTGAGTTTCCCAGTGGTGAGTTTCTCAGGAAAATTTAGCCCTTTTGAGCCCCTTATTCCTCGGCAGTCTAGTAGAAGTAAAGAAGTAGATTCCAGCAAGGATAATCTCAGgAAGAAGGAAGACACTACTAGCAGCTGCAATAAGTTGCAAGCACCACATAATGCAAGTGCCACACACAGAGGCCCAACTAAAAAAAGTTCAGGCTATTGCGAGTGCTGCCACATCGTCTACAAAGACCAGTATGAGGTCATCAACAGGCTTCTCTCACTTCCAACTGAGTAATTCAACTGCAATGGTGCCGAATTCTGTCAGCGAAAATGAAAAATCTCTCCAGAATTCCCTTGTTCAAGAATGTGATTGTCTACCGGCAAATACTGACAACAAGGCACACCCCATTCCTAAACCTATCCAGA

Function

NR:

description
uncharacterized protein LOC110491667

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253254.1 True 2802 mRNA 0.43 12 5602681 5613207
XM_043253255.1 False 1079 mRNA 0.44 11 5604270 5613207

Neighbor

gene id symbol gene type direction distance location
adam11 adam11,LOC107716458,LOC107653271,LOC107727973,LOC107674663,LOC107551824 coding downstream 2018 5564608 ~ 5600663 (-)
foxh1 LOC107716461,LOC107551840,LOC107556762,LOC107727966,LOC107653269 coding downstream 62245 5535173 ~ 5540436 (-)
stat5b stat5b,LOC107716464,LOC107674616,LOC107653267,LOC107556764,LOC107727963,LOC107551841 coding downstream 97852 5487800 ~ 5504829 (-)
ghdc ghdc,LOC107556765,LOC107727961,LOC107716443,LOC107577004 coding downstream 116401 5477522 ~ 5486280 (-)
emc9 emc9,LOC107716469,LOC107551848,LOC107674563,LOC107727956,LOC107653261 coding downstream 182815 5415899 ~ 5419866 (-)
klhl11 klhl11,LOC107694394,LOC107556757,LOC107551837,LOC107674689 coding upstream 7931 5621138 ~ 5626937 (-)
aclyb LOC107727950,LOC107556756,LOC107674696,LOC108431393 coding upstream 15539 5628746 ~ 5658945 (-)
buc2l NA coding upstream 72319 5685526 ~ 5690389 (-)
avl9 avl9 coding upstream 90106 5703313 ~ 5733288 (-)
sult1st6 sult1st6,LOC107674799,LOC107708285,LOC107574469 coding upstream 123385 5736592 ~ 5746530 (-)
G85572 NA non-coding downstream 1149405 4452755 ~ 4453276 (-)
G85569 NA non-coding downstream 1190481 4411340 ~ 4412200 (-)
G85553 NA non-coding downstream 1289633 4312579 ~ 4313048 (-)
G85551 NA non-coding downstream 1290777 4311453 ~ 4311904 (-)
G85545 NA non-coding downstream 1317746 4275337 ~ 4284935 (-)
G85868 NA non-coding upstream 114097 5727304 ~ 5731090 (-)
G85889 tgfb1i1 non-coding upstream 197450 5810657 ~ 5814446 (-)
G85891 NA non-coding upstream 207142 5820349 ~ 5821178 (-)
G85892 NA non-coding upstream 224165 5837372 ~ 5837674 (-)
G85893 NA non-coding upstream 225352 5838559 ~ 5838957 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other downstream 176170 5423084 ~ 5426511 (-)
G85779 atp2a1l,LOC107551849,LOC107716472,LOC107653256,LOC108274121,LOC107094295 other downstream 205769 5322478 ~ 5396912 (-)
LOC122355055 LOC107668612,LOC107583503,LOC107750859,LOC107717092,LOC107671135,LOC107559032,LOC107552862 other downstream 1185784 4412573 ~ 4416897 (-)
trnal-uag_71 NA other downstream 1206188 4396412 ~ 4396493 (-)
trnal-aag_72 NA other downstream 1209526 4393074 ~ 4393155 (-)
G85925 NA other upstream 371782 5984989 ~ 5987780 (-)
G85930 LOC107711793,LOC107755027 other upstream 377706 5990913 ~ 6012111 (-)
LOC122355418 pnmt,LOC107571312,LOC107676565 other upstream 437961 6051168 ~ 6078068 (-)
G86049 LOC101886504,LOC101886427 other upstream 1057112 6670319 ~ 6671247 (-)
G86108 NA other upstream 1490673 7103880 ~ 7104218 (-)

Expression


Co-expression Network