LOC122355213 (zgc:92313,LOC107719557,LOC107708960,LOC107664633,LOC107598673,LOC107653945,LOC107557352)


Basic Information

Item Value
gene id LOC122355213
gene name zgc:92313,LOC107719557,LOC107708960,LOC107664633,LOC107598673,LOC107653945,LOC107557352
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 242830 ~ 247565 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253267.1
atttcaggaacctaatgtttttttcttgagcGAAACTTCCGAAGTCTTGATCTTCGCTTCACCTGGCTTCATCGAACGAGGAAGTGATTATTTCTAAAACGTATTGTTTTTGCGTCCACCGCCTCTGATATAAACAAAGTTTTGGAGTCTCTGTAACAAAGGTATTTTGAAAGAATGCGGTGCGCCTCATTTATTCGCACTGCCTTGGTCGTAATGATTGGGTTGTGGATGGGCGAGGCTCAAGAATGTGGTCGGCCACAAATGCTGAACCGAATAGTCGGAGGTTCCTCTGCGTCGGAAGGCGCGTGGCCGTGGCAGGTGGATATTCAGactgaCAGTCAAGGACATGTGTGTGGAGGAACTATCATCTCGGAGAGCTGGGTGCTGTCTGCTGCACATTGCTTTCCCaaCCCCAATGACATCTCCCAATACACCATTTACGCGGGCCGCCAGCAGCTGAACGGCTGGAACAAGGGCGAGTCCAGCCATAGGGTCCGCCGCGTGGTGGTTCCTCTGGGTTACACGGACCCTCAGCTGGGTCAGGATATCGCTCTCGTGGAGCTGGCCACGGCTGTCATGTGGTCCGATCACATTCAGCCTGTCTGCTTGCCATATGCCAATGTGGAGTTCAGCAGCGACATGAGGTGCATGATCACTGGATGGGGTGACATCAGAGATGGAGTTGCTCTGCAGGGTGCTGGGCCGTTGCAGGAAGTCCAAGTGCCAATCATTGACTCGAAGACTTGTCAGGATATGTTTCTGATAAACCCCACAGAGAACATTGACATCCGCTATGATATGATGTGCGCTGGATTCCAACAAGGAGGCAAAGACTCCTGTCAGGGCGACTCTGGCGGTCCTCTGGCGTGTCAGGTCAGTGATGGAAGTTGGGTGCAAGCTGGAATTGTGAGCTTCGGCCTCGGCTGCGCTAAACCAAACCGACCGGGAGTGTATGCTAAAGTATCCAGCTTCACCAACTTCATCCAGAGTCACGTTGGAGGAGTCCAGCTCAAGAGCGCATCGGGTCACATCTGGGCTGACCGGGTCATGGTGTTCATCAGGACTCTGGTGTTACTGGTATTGGTGCAGCTGctgagataaacacacacacacacacacacacacactgatcctCGCACTTGCCAAAAACCTCCCAACCCCAAAACACCGACCTACACAAAGAGATTCTAACGCCATAAGTAgctttttaatcagtttttaaacaactttttatATCATGTAGTTTCCTGTGTGGTTTGTACCAAAAATACGCACCgaatgaaatggaaaataaaagcatgtcttTTACCACTTGattaatatattcttttaaCTATTTGAAACTGAAGAACACTGAGATGATTGTGTAGTTAAACTGTGCAAAtgatgccatttttttaaactgaaaccCTCAAATGGTTCTCGTGGGCAGCTTACACGCATGAGATTTGGCAATCATGAcgcttattaaattattaacggACACTTATTTGATCCAGCCTTTTGCACAGCAGTTATCTACCTTTTTGTATCAGGACAtgtaaaaatttttaagatCACCCGTGCAATTAGATGTGAAATATTTAGCGTTTTTCTAAAGACGGTTGTATATTTGTATCTCTTGGTGACTGTTTCTCtttaaatgctgtaaataactttgtaataaagtgatttttgtAACCGCTA

Function

symbol description
zgc:92313 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space. Is expressed in EVL; otic vesicle; periderm; pharynx; and sensory system.

NR:

description
PREDICTED: serine protease 33-like isoform X1

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K09629 PRSS33; serine protease 33

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253267.1 True 1686 mRNA 0.46 7 242830 247565

Neighbor

gene id symbol gene type direction distance location
LOC122355215 vkorc1,LOC107719575,LOC107598672,LOC107654009,LOC108413442 coding downstream 8152 233266 ~ 234678 (-)
LOC122355214 LOC107561990,LOC107575498 coding downstream 14500 223878 ~ 228330 (-)
LOC122355212 LOC107561990,LOC107575498 coding downstream 19957 218214 ~ 222873 (-)
LOC122355756 LOC107660458 coding downstream 34762 193733 ~ 208068 (-)
LOC122355205 dlx4b,LOC107739765,LOC107664616,LOC107708902,LOC107557342 coding downstream 66127 171762 ~ 176703 (-)
LOC122355757 LOC107557351,LOC107719532,LOC107654013,LOC107708952,LOC107598581,LOC107664606,LOC107708954 coding upstream 24701 272266 ~ 290655 (-)
LOC122355360 LOC107598582,LOC107654016,LOC107732180,LOC107708889,LOC107664586 coding upstream 44476 292041 ~ 298114 (-)
LOC122355359 LOC107654014,LOC107664598,LOC107557378,LOC107708888 coding upstream 51043 298608 ~ 318529 (-)
irf3 NA coding upstream 86012 333577 ~ 338993 (-)
brsk1a si:ch211-255p10.4,LOC107598587,LOC107732176,LOC108441159,LOC108273514,LOC107654020,LOC107557374,LOC103033508,LOC108427376,LOC107658484,LOC107548343 coding upstream 116041 363606 ~ 381167 (-)
LOC122355220 LOC107561990,LOC107660458 non-coding downstream 43963 197400 ~ 198867 (-)
LOC122355221 LOC107561990,LOC107660458 non-coding downstream 45437 196901 ~ 197393 (-)
G84487 NA non-coding downstream 101749 140100 ~ 141081 (-)
G84492 LOC107565537,LOC107671635,LOC107690840 non-coding downstream 153256 88055 ~ 89574 (-)
LOC122355197 NA non-coding upstream 135007 382572 ~ 385022 (-)
LOC122355423 NA non-coding upstream 138324 385889 ~ 386457 (-)
G84547 NA non-coding upstream 230458 478023 ~ 478431 (-)
G84654 NA non-coding upstream 362502 610067 ~ 611847 (-)
G84666 slc35g1,si:ch211-197g18.2,LOC107598601,LOC107654036,LOC107664634,LOC107664593,LOC107557359,LOC107708939 non-coding upstream 412524 660089 ~ 663746 (-)
LOC122355191 dusp3b,LOC107753093,LOC107590411,LOC107688089,LOC107709997 other downstream 71535 168048 ~ 171295 (-)
G84486 emsy,LOC107671635,LOC107690840,LOC107722098,LOC107565537,LOC107747365 other downstream 112845 78617 ~ 129985 (-)
G84485 vaspa,LOC107722097,LOC107565535,LOC107710395,LOC107671612,LOC107575450 other downstream 120063 12045 ~ 122767 (-)
G84521 NA other upstream 71765 319330 ~ 321260 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other upstream 92708 340273 ~ 360482 (-)
LOC122355759 NA other upstream 236873 484438 ~ 490379 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other upstream 249399 496964 ~ 500219 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other upstream 295681 543246 ~ 552443 (-)

Expression


Co-expression Network