LOC122355224 (LOC107758424,LOC107594208,LOC107669182,LOC107584235,LOC107753458,LOC100536080,LOC107683721)


Basic Information

Item Value
gene id LOC122355224
gene name LOC107758424,LOC107594208,LOC107669182,LOC107584235,LOC107753458,LOC100536080,LOC107683721
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7573171 ~ 7578201 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253276.1
GCGCGCGGTTCGTTCTGTGAGCTCTAACTTGACTCCTTGAATGGCTCTTCGCGTGTAGACGGaatgttctttcttttatcaCAGATAGTGTGTAGTTATTACGTCTATAAAGTATTTAACTGGGACTTGGATACGTGATGGATAATGAGGGCAATATCTTTTCAGAACCAAGGACAGCTCTCAACAGCCAACATGATTTCAACGCTGACGAAGGATCGCTTGCAGGCACTCATGACTAGTTTGACATCTGAGGTGATGGACGTGCGCTTTCTCAACAAGATGCACGACACCACTACAACTTCGCCGACGCCAAGTTTCACGGATAACGAGACCAGATGCGGAGAGCCCATTCTGAGTTACGGACATGTTGAGAAAGTGCTCATCGGAGGGGTTTTGACCTTGCTTACTTTTTTAACGGTTTGCGGGAATTTGTTGGTGGTCATCTCGGTGTGTTTTGTGAAGAAACTGAAACAGCCTTCTAATTACTTAATCGTTTCCCTGGCCGTCGCAGACCTGTCGGTTGCGTTGGTCGTAATGCCGTTCGTCAGCATCACTGATCTCATAGGAGGACAGTGGATCTTTGGTCgtgttttttgtaatgtttttatcgcAATGGACGTGATGTGCTGCACCGCTTCAATAATGACCCTATGTGTTATTAGCATAGACAGGTACCTGGGCATCACTAAGCCTTTGACGTATCCCGTGAGACAGAGTGGAAAGTGCATGGCCAAAATAGTGTTGTCTGTATGGCTTCTCTCTGCCTCCATCACCCTACCCCCACTGTTTGGATGGGCTCAGAATGTCAACGATGACAATGTGTGTCTGATCAGCCAGGATCTGGGCTACACTATCTACTCCACCGCCGTGGCCTTCTACATTCCCATGTCCGTGATGCTCATTATGTATTACCGGATATACAGAGTGGCAAAGGTGAGTGCTGCCAAACACACAATCGCTGGTTTTCCCAAAGCCGAAGACGAGGAGAGCGTGACCTGCGTGGCTGCGGTCCTAAAGCTGCAGAGGGAGGTGGAGGAGTGCGTGAGCTTTTCTCGCCTTCTCAGAAATGACCGCAAAAATATCTCCATCTTCAAAAGAGAGCAGAAGGCAGCGGCCACCCTCGGGATTGTTGTGGGGGCTTTCGCCGTATGCTGGCTGCCCTTCTTCCTGCTTTCTACGGCTCGGCCGTTCATCTGTGGAGTGCAGTGTAGCTGCGTGCCTTTGTGGGTGGAGAGGACACTGCTTTGGCTGGGCTATGCCAACTCGCTCATCAACCCCTTCATTTATGCGTTCTTCAACAGAGACCTCAGGACCACCTACCATAACCTCATCCGCTGCCGCTATCGGAACATCAACCGCAAGCTTTCGGCGGCCAGCATGCACGAGGCTTTGAAACTAGCCGAGAGACCTGACCTGGTGCTGTAGGCTGTCTGTACCCTTCATGTCTCTCTAGGGACTGATGCAGTCACATGGAGGCCGAGACGTTTTTGATGAATTCCTTATTGCTCTCGCAGAGGAGTCTTTCAGTCACTTCAATTAAGTCAAATTGCAGTGACTTTAATTAAGTGAAATTGGAACGATTGTGAAGcttcatgaaatgttttataaagtgctttataaattaGATCTTATCGCTGTAAAACGTGCTTGATGAAGGAGCAAGATAGTAATCGATATCAAAGTGCGATGAATACAGAGTATCACGGTattctttgttgtttatttctgtgcTTGTAATATatgtgaccacaaaaccagtcaattTTACATGAGCTGAAAGCTAATtgaataagctttccactgatttattaggacaatatttgtctgagatacaactatcaaaagtctgagggtgcaaaaaattgTTCAGATTAAGTCCTTAACAAaccatattactaatcaaaagttAAGTCTTAATGTATTAATGGTAggatataaaaatgtatctccatgcaacatgatctttacttaaatatactttaatatgaaaaatcaatcattttgacccatacaatgcattgttggatattattacaaatatacacCCATGCTACTcatgattggttttgtggtctggGGTCACATCTATGTTATACTTCCTAAGAACCACAAACCCATGACTGCAtggaagaaacatttttttagtcGTGTATGAATTTCCTTAGTAAGTCTCAAAGTCATATTGGACCCCACTGACATAAACCCatatatacatgaatacaaatatctaaatttgACAGGTTTTCAACAATAAGAGTGTGAGAAAATAATGCCGAACTTTTTTGGGGTGAACATTCTTTTTAAGTATCTAAGTACCTACTAGAATAAACTATTCAGTTTATGATCAATCATAAAGATTTTTTCATTCCACTGTGTTGCAGTCCCGTCCCTTCCGCCTCCAAATCACCATCAGTGATTGCCACTAACAACGTGACAGCAAGCTGAGACTGTCACACCAATAAGTGTATTAATAGAAGCAAGGCATTTATTGTCTTCTAGCTGTGAGAAAGACAGGGGTGGGCAGGTGCCTTTAATTTCTGTCAGCATGCTTGGCCAACAGATGGTAAACAATACATCAACATGAACTTAGTGGCCCTGTGAATTCAGTGCACTTCGATACAAAACATCTATGTATGATTAATATTGTAAGAAAAAAGTGCTGAACATAAATGATGAGTTGAGATTAAAATAGGTGGTTAAAAGTCATGTGGTAACAATTTATTAGATAAATATTAGATTCGGGACAACTGAGAAATCATAGCAGACCGCTGTAATTGTCGGTTAAgctttgtataataaaaatgagatgaagaactattaaaattaaataaaacattataattaattgtagaaatatttcaaaacatataAAGGTAAATGCAGTGTAAATCCAAAGGAGCACTGATGTCAACACTGTGTTTCATGGccaataagaaaaaatatataatatgataaatatataatatgataaacatatcatataaaaatataataggtGAAAAGGTAAGCAGGTGAGCAAGAGTTGACagctaatcaaaaataaaataaattaacatggacaaataaataaaaacttgaatatttaccattattatttattatttatatttactgtccCTATgcattcttaataataataataataataataataataataataataagcctgaaagagaaaagaaggaAATATGTCAGTAAGATGCTGGCTGGGGACAACAAAAACCTGCTGAGGtcaattaattaaatctaattaataaaaaaatagtttgtgcTTTAGCATCTGGACATTTGGACTCCACATTAATCCAcattatgctttttattattggACTTATACTCATTGTATAAGGATTTGAAAGTAATGCTTTAAATGTATCCATGGTGAGGACACTGTCCTTTGTTctatacagaaagaaaaaatgaacgGGGATGTTAGGAGTTATTAGCTATCTAGGCCACATTGCAAAATCAAAGAAAAGCTTTTCCAAGTGTTTCAGAGAATTTATACAGGTCAAGAGGTTTTGTTCTCATGTTACACCTGAACTGAACATGAACGACTGTTCAGTAAATTGTACCTCTTTCTGAATGCTGCGACATGCTGCCCTGCTGAGTCTTTCAGTCTTGTTTTTCTACCACAGCATGAGGGCTGGTTCCTGTCCATTACCCAGGGGGCTATTTGGAATCAATGTACCTtcaaatatattcagatttaaaGTTTCAATGCAACATCGGTGTACTTTATTCACAGAGGACATTTGTCagtttaatattgtaaattgtGAGGTTAGAGACTGTAGCCCTGTAGTTTAACGTATAGCAGAATTTTAGAATGTTAACTTTAGCTTTGATATGGTTTATACTGATGCCATTGTTTTTCATGCTCTCCATGCAGTCCAGCAGAATAATCTAAATATCTGAATAATAACTGTGTTTGCAAGGCGGCACTGTCTTGATATTTGTTATAGATTTACGTTAGGGtttgttcctttttttactgtgatgttCATAAAAGTTTAGTCAATTCAAACTCTAACTGCCAGCAATTGGAAAACTGTTGTATTTAACGCTTTTAACAAGTTTGCTGTCTTGCAAGCACTGGTATTTGCTTTCGGAAATGCAATATGCAGTTTAAGTGaacattaaatgtatgttttttgacACAGTAAAGACgatgtatta

Function

NR:

description
PREDICTED: 5-hydroxytryptamine receptor 7-like

GO: NA

KEGG:

id description
K04163 HTR7; 5-hydroxytryptamine receptor 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253276.1 True 4182 mRNA 0.39 2 7573171 7578201

Neighbor

gene id symbol gene type direction distance location
rpp30 rpp30,LOC107669172,LOC107584236,LOC107753460,LOC107758421,LOC107683719,LOC107594207 coding downstream 18319 7552132 ~ 7554852 (-)
pcgf5b pcgf5b,LOC107584148,LOC107594155,LOC107669177,LOC107753439,LOC107758437,LOC107704022,LOC108410714 coding downstream 34606 7527076 ~ 7538565 (-)
hectd2 hectd2,LOC107584154,LOC107758436,LOC107594154,LOC107753452 coding downstream 51765 7504716 ~ 7521406 (-)
kcnj19b si:dkey-100n10.2,LOC107584158,LOC107758432,LOC107661094,LOC108424892,LOC107727700,LOC108273498 coding downstream 208156 7359383 ~ 7365015 (-)
acbd4 LOC107661095,LOC107733800,LOC107662569 coding downstream 390337 7174618 ~ 7182834 (-)
LOC122355798 LOC107753456,LOC107669160,LOC107584195,LOC107594195 coding upstream 26652 7604853 ~ 7608716 (-)
ifit10 LOC107584141,LOC107753434,LOC107669232,LOC107758418,LOC107594210,LOC107683722 coding upstream 31193 7609394 ~ 7611992 (-)
ifit9 LOC107669232,LOC107753434,LOC107584193 coding upstream 33934 7612135 ~ 7614367 (-)
stambpl1 stambpl1,LOC107594159,LOC107758441,LOC107669191,LOC107683716,LOC107584140 coding upstream 58642 7636843 ~ 7646791 (-)
lipf lipa,lipf,LOC107753430,LOC107584137,LOC107594160,LOC107758444 coding upstream 73547 7651748 ~ 7662731 (-)
G86232 NA non-coding downstream 50170 7522664 ~ 7523001 (-)
G86230 NA non-coding downstream 68710 7502577 ~ 7504461 (-)
G86210 LOC107758434,LOC107584156,LOC107669230,LOC107594152 non-coding downstream 86096 7480055 ~ 7487075 (-)
G86216 NA non-coding downstream 97041 7469027 ~ 7476130 (-)
G86201 NA non-coding downstream 187188 7380107 ~ 7385983 (-)
G86324 LOC107683711,LOC107669213,LOC107594157 non-coding upstream 10110 7588311 ~ 7590983 (-)
G86325 NA non-coding upstream 14600 7592801 ~ 7596998 (-)
G86330 ch25h,LOC107753436,LOC107584143,LOC107669234,LOC107683723,LOC107758440,LOC107594211 non-coding upstream 37667 7615868 ~ 7617213 (-)
G86334 NA non-coding upstream 53195 7631396 ~ 7634556 (-)
G86333 acta2,zgc:86709,actc1a,actc1,ACTC1,LOC107594158,LOC103374497,LOC108414322,LOC106531354,LOC107683715 non-coding upstream 56437 7634638 ~ 7636144 (-)
G86203 NA other downstream 184261 7388236 ~ 7388910 (-)
G86108 NA other downstream 468953 7103880 ~ 7104218 (-)
G86049 LOC101886504,LOC101886427 other downstream 901924 6670319 ~ 6671247 (-)
LOC122355418 pnmt,LOC107571312,LOC107676565 other downstream 1495103 6051168 ~ 6078068 (-)
G85930 LOC107711793,LOC107755027 other downstream 1561060 5990913 ~ 6012111 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other upstream 756203 8334404 ~ 8359992 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other upstream 933202 8511403 ~ 8513265 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other upstream 1032351 8610552 ~ 8612445 (-)
plbd1b LOC107578697 other upstream 1104242 8682443 ~ 8687548 (-)
trnar-ccu_66 NA other upstream 1109297 8687498 ~ 8687570 (-)

Expression


Co-expression Network