LOC122355243 (LOC107734216,LOC107669223,LOC107584111,LOC107692080,LOC107554034)


Basic Information

Item Value
gene id LOC122355243
gene name LOC107734216,LOC107669223,LOC107584111,LOC107692080,LOC107554034
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 9713064 ~ 9734340 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253312.1
ACGCTAGCGCCCGCTGATGGTGACTGGCCCGAAACACCTCAGTTTGCGTCACAGAGTTCAGACGAACAGACTAGCATCGGCCATCTTacttcctcaaaaaaaaaaaaaaacttcagtcccaaagaaaaacagaatcCCTGGATACATGGGTGACCACATCAAGGACAGTTATGGAGCATTAAACCAAGGGGCGACGACAAGCAAGCTAGACACAGCTCTAGGGAACAGGAAACTGAAGTGAGGAGCTTCCTGTGACCATATCGTCCGCTGATCCCCAGCGAAACCCTTGACTCCTCGCTGAGGAGACATGGAGGAGCAGGGGGATGCTGGGATTGGGGGTTTGTTGGCGTCCAGCCCGCAGAGTGAGGCTGTAACCCATGAGATGGGCGAACTGTCCCTGCACCCCAGCCAGAGGCTGCCCCCCCTCAACGAACGCAAAAATGTTCTCCAGCTGAGGCTACAGCAGAGACGTACCCGCGAGCAGCTCGTTGATCAGGGAATCATGCCACCCCTGAAGAGCCCTGCGGCGTTCCATGAACAGATCCGCAGCCTTGAGAGAGCCAGGACTGAAAATTTCCTAAAGCACAAAATACGCAGCCGCCCAGAAAGGGCTGAGTTGGTCCGCATGCACATCTTACAAGAGACGGTGGCAGAGCCTTCTCTGCAGGCCACTCAGCTGAAATTGAAGAGAGCTCGATTGGCTGATGACCTGAATGAGAAGATTGCTCAACGCCCTGGCCCCATGGAGCTGGTGGAGAAGAACATCCTGCCTGTGGACTCCAGCGTCAAGGAAGCCATCATTGATGGTCAGATGCAGTACCCTAGAATTCTAGAGGAACCAGCCGATGAAGACAGTGGAGATGCGTTTTCACCTGAGCAGCCAGCCAGTCAGGAGTCCCAGGGTTCTGCAGCTTCTCCTGGGGAGGTCCGGGCCATTGAAGAGTCCTCACCATTGCCTAACAACTTCTTAAAGCACTTTCCTGCAGTGACCACCACCACAACAGATTTCCTCAAGCCTTTTTCCACCAATGAGCAATTAATTAGTCCTCCAGCACCCATGCCACAGCTAATCACCGTGGCCCCTGTGAAGTCTGGACCCACCCTTGTAAAGCAAAGTCAGCCTAAGTTACCTGGGGACAAGAGCCGCAGCAAGAAGAGTAAGGAGGCCAAGCCACGTgtgaaaaagttaaaatatcatCAGTACATTCCCCCAGACCAGAAACAAGAACTCAACCAAGCTCCGATGGACTCCTCATATGCTCGTTTACTACAACAACAGCAGCTATTTTTGCAGCTACAGATCCTGAgccaacaacaacagcagcactACAACTACCAGACAATCCTTCCTGCACCTCTCAAGCCTGTAATTGAAGGCCAAAACAGTGGTGCCACAGTGGCTATCAACAGCACTAGCAGCCTTCCTGCGTCCATTGTGGTGTCTCTGCCCACAGCGACACCTGTGCGGCCCAACAGCACCCTTTCCAACCGCAAGGCAGGCATACTACCTGCCAACCTAGAGGAGATGAAgGTGGCAGAGCTGAAAATGGAGTTAAAGTTACGTGGTCTTCCGGTGTCTGGAACAAAAACAGACCTAATTGAACGGCTTAAGCCTTTCCAAGAAAACACTGCACCCAGCTGCACAGGACCTAACACACAGTCCTGCAGCACACCTATGGAGGTGTCCAGCACCACTACAACCCTATCCCCCATCCAGCAGCCCTCTGAAAATCTAAGCTCCACTCCACCTGTGTCTCCTGGTTCTTCAGAGCTTCACAGCAAAGAAGAAGCATACATGGAGGGACAGGCAGAGGGCCAAAACCGAAGTTTAGTGACGGCAGCTCCTGTTCCTGAGGAACAAGACCGGAGACTACACGAAAAGGAGCGACAGATTGAGGAACTGCTGCGTAAATTGGAGCAGGAGCAGAAGCTGGTGGAGGAACTGAAGATGCAGCTAGAGGTGGAAAAAAGGTGTGGACAGGTTCCACCTGCAGAAAATAACAACGCTTCCAGTCCAGCCACTATGTTGACGTctgtcaaaacagaaaacactgtcCCTCCTAACTGCACACTGAGTCCACACACTACGCCAACGCTATTGAAGCTCGAAGAGGCTCATCCCAACCAGGTGACAGCAACTCCTCTCCGTCAGTTCATTATCAGCCACCAGGGAGTCCCACAGGTCATAGGACAGCCCCAGACTCTTCTAACCACTTCTCATGGGGGTACTCAGATCCTTCTTCCAATGCCCCTGGCAAATAATACCACTACCATCCAACTGCCCAACACTAATGTCAAACTACAGCAAGTTTTGCAGGCTGTCTCTCCATCAGTGCCAGGTATAATTCAGAACCCCCAAATACAGCCCACCAAAGCAGAGAGTCCTGCGTCACAACAGCTGCTCAGTCATAACCACATAGTTCAGACCCTGCCTGTGGGCGCCACAGAGAGGTCAGGCTTCCAGCACGTCACCAATGAGACCCCAGCAGGCCTGGAGATACCTCAGTGCTTCCTCAGCAACTCCCCAGATAACAGGATCTCACCTCAGACGTCCCCCATCCCATCATCCCTTATCAATGGGCCGCTAAACAAAACATCCTTCATTCAGCAGCCCCCAGTTTTCAACCAGACACCCAAGAACAGAGAGCCGCCTCGTTATGAGGAGGCCGTCAAACAGACACGCAGCCTACAGAATGCTGCTGTCTCAGAGATTCCCACAGCAACAAGTCAACAGATGGATGATctctttgacattttaatagaaAGTGGAGAGATCACTCCCTTTAGTCAACAGGACCCGTCTGTGCCTAGGATGATGCCTGTCACGGCCAGCATCACCACCCTGCCTATCAACACCGTCCTGTCCCGTCCACCCGCCCAGGTGCAGATGGCACCCCCGCCGGCGCTCATGGTGTCGCCCATGCCCAGCCTGGCCTCCCTGGACTCCGACAACCAGTTGGAGGCCCTGCTGGAGGGCACGCTGGTTGGGGACACCGAGCCGGAGCATAGGACTTTGGGCCTGCTGGAGGAGCTTCAAAACCAGATACTGGAGCAGCCAAACTCCCCAATGGACACTTCGGAGCTGAGCTTCACCGACCCGCCACCTTCCTCTTCCGCCCTGCCCTTTAGTCTCCAAGACACCGGCCTGGACAACATGGAGTGGCTGGACATCACTATGCCTGGGCCCATCGGCGGACTCAATCCATTGGGCATCACCTCTGAATTCCTGGACGCTCATGATCTGCAGCTGCACTGGGACTGACAGGAAACGCTTCAAACACGGTTATGCTTTCACTCGCACAACAAGCCGTCTGTCTCGGGGTCTGTGTGGCAGCGGTTCACGTCTGGCAGCTTTATGTGACTAGACTCCAGCTCAGCTGTACACTTCACTTACGCTGGTTCTAATCACCATCTGTTCTCATTCACCTTTTGATCAGAAAAGACACATGAGCCTTGTGGGTAATGCTAGCTAGGGCTCTCTTTGCTGTGCCATTCTGAGAGGGAGCTGCTTTCGGGCAGATTGAATTCTGCTGTATTgctattttgtttagtttttttcattcacGTGCCATTGACTTCAGATCGGTTCCAGTCAGGCTGTAAATATCCTCACAGCTAGTTTTAAGGAAGAGCTGTCGTTCCAAATGATGTGGCATCGCAGTAGAGTTCACTTTGTTTGctcaaaattgaaaattgagCCTTGAGCAATGACGCCGTTAGCGCTCCTGTCCGTGATCATGAGTGTCTGTGTCGAGGATGAGAATGTCAGACTCAACGTAGCAGTCAAGTGATGTTTCCCAGAATCCTCTTTTTCAGCACTGACTGCAGTAACAGCCTGGTGTCTGCAAGACTCAGTGGCAAgtgcactaccattcaaaagttttcacattGAGCGTAGTTTGGCAAAGATGGAATTATTCAATCAAAAGTGActtatataatgttacaaaagatggTTATATGTTTCTACTcatgctaaaatataatatacatgctaaattgccataaaaatattaagcagcacatttgtgaatgatcatgtgacactgaacgGCTGCTGGAagttcagcttttattttaaaatatattaaaattgaaaacggCTATTTTATATTGCAGAAatgtttcacagtttttatgttttactatatttttcaattacataaatatagcCTAGTGAGCACTTTCAAAAAGAAACTTAAATGGTTGTATAGTTCGATGAAGATCTAATTAACATATCCAATTTTTAGCAAATCTGCCTTTTTATGATATTGTTTGACTGGCTGTTGACCAGAAATATTGAGTTGTGTTTTATAAAGCGGCTACAATTGCAAATGTCCCGTAAACGTAGACGTCCAAGGTTGCAAAGAGCTTTTGGTCTGATTTGTATCTGGGAATTGCAGACATAGGctatactgtttgttttttggtccTGGAAACAGAAATTTTGTCATCAATCAGCTCTCAATTTCAGACACAAAGCATCCCATTTTGATCAACGGGAGATCAGTTCGTCTATACCATTTGGAAACGATCTAAAATGAATCTATAAAAAGATGTAAATAATCTACGAGGACAAATTTTTGtataaagaaaagcaaaaagaaaaactattttgtctGACTCGTTGGATGTGCGACCccttgtttttgtgtatgtgaaTCGTGAatcagtgtgtctgtgtgtgattgTTCGTCGCTTCAGTGGAATGTTGTGTTTGATTTTCGGTGCATCATACTGTAAGAAAgttccagttttttttcccacatatTTATCAGTTCGGTTCACGCAGTGGGTGCTATATTTCAAgttctcatttgcatatttttgatgctatcggaaaaaaaaaaaactgtcaagaGACCCTGCTTTTAGAAAGAGATTATGTAAATGAAGCCATCTGAAGTTACAGCTGACACTAAATAGTGATCTTAATCAACACAGGGCAACTGTTTATTCCTCCAGTAAATGGagttgaaaaatgcaaaaaaaaa
>XM_043253313.1
CTGTAACCCATGAGATGGGCGAACTGTCCCTGCACCCCAGCCAGAGGCTGCCCCCCCTCAACGAACGCAAAAATGTTCTCCAGCTGAGGCTACAGCAGAGACGTACCCGCGAGCAGCTCGTTGATCAGGGAATCATGCCACACTGAAAATTTCCTAAAGCACAAAATACGCAGCCGCCCAGAAAGGGCTGAGTTGGTCCGCATGCACATCTTACAAGAGACGGTGGCAGAGCCTTCTCTGCAGGCCACTCAGCTGAAATTGAAGAGAGCTCGATTGGCTGATGACCTGAATGAGAAGATTGCTCAACGCCCTGGCCCCATGGAGCTGGTGGAGAAGAACATCCTGCCTGTGGACTCCAGCGTCAAGGAAGCCATCATTGATGGTCAGATGCAGTACCCTAGAATTCTAGAGGAACCAGCCGATGAAGACAGTGGAGATGCGTTTTCACCTGAGCAGCCAGCCAGTCAGGAGTCCCAGGGTTCTGCAGCTTCTCCTGGGGAGGTCCGGGCCATTGAAGAGTCCTCACCATTGCCTAACAACTTCTTAAAGCACTTTCCTGCAGTGACCACCACCACAACAGATTTCCTCAAGCCTTTTTCCACCAATGAGCAATTAATTAGTCCTCCAGCACCCATGCCACAGCTAATCACCGTGGCCCCTGTGAAGTCTGGACCCACCCTTGTAAAGCAAAGTCAGCCTAAGTTACCTGGGGACAAGAGCCGCAGCAAGAAGAGTAAGGAGGCCAAGCCACGTgtgaaaaagttaaaatatcatCAGTACATTCCCCCAGACCAGAAACAAGAACTCAACCAAGCTCCGATGGACTCCTCATATGCTCGTTTACTACAACAACAGCAGCTATTTTTGCAGCTACAGATCCTGAgccaacaacaacagcagcactACAACTACCAGACAATCCTTCCTGCACCTCTCAAGCCTGTAATTGAAGGCCAAAACAGTGGTGCCACAGTGGCTATCAACAGCACTAGCAGCCTTCCTGCGTCCATTGTGGTGTCTCTGCCCACAGCGACACCTGTGCGGCCCAACAGCACCCTTTCCAACCGCAAGGCAGGCATACTACCTGCCAACCTAGAGGAGATGAAgGTGGCAGAGCTGAAAATGGAGTTAAAGTTACGTGGTCTTCCGGTGTCTGGAACAAAAACAGACCTAATTGAACGGCTTAAGCCTTTCCAAGAAAACACTGCACCCAGCTGCACAGGACCTAACACACAGTCCTGCAGCACACCTATGGAGGTGTCCAGCACCACTACAACCCTATCCCCCATCCAGCAGCCCTCTGAAAATCTAAGCTCCACTCCACCTGTGTCTCCTGGTTCTTCAGAGCTTCACAGCAAAGAAGAAGCATACATGGAGGGACAGGCAGAGGGCCAAAACCGAAGTTTAGTGACGGCAGCTCCTGTTCCTGAGGAACAAGACCGGAGACTACACGAAAAGGAGCGACAGATTGAGGAACTGCTGCGTAAATTGGAGCAGGAGCAGAAGCTGGTGGAGGAACTGAAGATGCAGCTAGAGGTGGAAAAAAGGTGTGGACAGGTTCCACCTGCAGAAAATAACAACGCTTCCAGTCCAGCCACTATGTTGACGTctgtcaaaacagaaaacactgtcCCTCCTAACTGCACACTGAGTCCACACACTACGCCAACGCTATTGAAGCTCGAAGAGGCTCATCCCAACCAGGTGACAGCAACTCCTCTCCGTCAGTTCATTATCAGCCACCAGGGAGTCCCACAGGTCATAGGACAGCCCCAGACTCTTCTAACCACTTCTCATGGGGGTACTCAGATCCTTCTTCCAATGCCCCTGGCAAATAATACCACTACCATCCAACTGCCCAACACTAATGTCAAACTACAGCAAGTTTTGCAGGCTGTCTCTCCATCAGTGCCAGGTATAATTCAGAACCCCCAAATACAGCCCACCAAAGCAGAGAGTCCTGCGTCACAACAGCTGCTCAGTCATAACCACATAGTTCAGACCCTGCCTGTGGGCGCCACAGAGAGGTCAGGCTTCCAGCACGTCACCAATGAGACCCCAGCAGGCCTGGAGATACCTCAGTGCTTCCTCAGCAACTCCCCAGATAACAGGATCTCACCTCAGACGTCCCCCATCCCATCATCCCTTATCAATGGGCCGCTAAACAAAACATCCTTCATTCAGCAGCCCCCAGTTTTCAACCAGACACCCAAGAACAGAGAGCCGCCTCGTTATGAGGAGGCCGTCAAACAGACACGCAGCCTACAGAATGCTGCTGTCTCAGAGATTCCCACAGCAACAAGTCAACAGATGGATGATctctttgacattttaatagaaAGTGGAGAGATCACTCCCTTTAGTCAACAGGACCCGTCTGTGCCTAGGATGATGCCTGTCACGGCCAGCATCACCACCCTGCCTATCAACACCGTCCTGTCCCGTCCACCCGCCCAGGTGCAGATGGCACCCCCGCCGGCGCTCATGGTGTCGCCCATGCCCAGCCTGGCCTCCCTGGACTCCGACAACCAGTTGGAGGCCCTGCTGGAGGGCACGCTGGTTGGGGACACCGAGCCGGAGCATAGGACTTTGGGCCTGCTGGAGGAGCTTCAAAACCAGATACTGGAGCAGCCAAACTCCCCAATGGACACTTCGGAGCTGAGCTTCACCGACCCGCCACCTTCCTCTTCCGCCCTGCCCTTTAGTCTCCAAGACACCGGCCTGGACAACATGGAGTGGCTGGACATCACTATGCCTGGGCCCATCGGCGGACTCAATCCATTGGGCATCACCTCTGAATTCCTGGACGCTCATGATCTGCAGCTGCACTGGGACTGACAGGAAACGCTTCAAACACGGTTATGCTTTCACTCGCACAACAAGCCGTCTGTCTCGGGGTCTGTGTGGCAGCGGTTCACGTCTGGCAGCTTTATGTGACTAGACTCCAGCTCAGCTGTACACTTCACTTACGCTGGTTCTAATCACCATCTGTTCTCATTCACCTTTTGATCAGAAAAGACACATGAGCCTTGTGGGTAATGCTAGCTAGGGCTCTCTTTGCTGTGCCATTCTGAGAGGGAGCTGCTTTCGGGCAGATTGAATTCTGCTGTATTgctattttgtttagtttttttcattcacGTGCCATTGACTTCAGATCGGTTCCAGTCAGGCTGTAAATATCCTCACAGCTAGTTTTAAGGAAGAGCTGTCGTTCCAAATGATGTGGCATCGCAGTAGAGTTCACTTTGTTTGctcaaaattgaaaattgagCCTTGAGCAATGACGCCGTTAGCGCTCCTGTCCGTGATCATGAGTGTCTGTGTCGAGGATGAGAATGTCAGACTCAACGTAGCAGTCAAGTGATGTTTCCCAGAATCCTCTTTTTCAGCACTGACTGCAGTAACAGCCTGGTGTCTGCAAGACTCAGTGGCAAgtgcactaccattcaaaagttttcacattGAGCGTAGTTTGGCAAAGATGGAATTATTCAATCAAAAGTGActtatataatgttacaaaagatggTTATATGTTTCTACTcatgctaaaatataatatacatgctaaattgccataaaaatattaagcagcacatttgtgaatgatcatgtgacactgaacgGCTGCTGGAagttcagcttttattttaaaatatattaaaattgaaaacggCTATTTTATATTGCAGAAatgtttcacagtttttatgttttactatatttttcaattacataaatatagcCTAGTGAGCACTTTCAAAAAGAAACTTAAATGGTTGTATAGTTCGATGAAGATCTAATTAACATATCCAATTTTTAGCAAATCTGCCTTTTTATGATATTGTTTGACTGGCTGTTGACCAGAAATATTGAGTTGTGTTTTATAAAGCGGCTACAATTGCAAATGTCCCGTAAACGTAGACGTCCAAGGTTGCAAAGAGCTTTTGGTCTGATTTGTATCTGGGAATTGCAGACATAGGctatactgtttgttttttggtccTGGAAACAGAAATTTTGTCATCAATCAGCTCTCAATTTCAGACACAAAGCATCCCATTTTGATCAACGGGAGATCAGTTCGTCTATACCATTTGGAAACGATCTAAAATGAATCTATAAAAAGATGTAAATAATCTACGAGGACAAATTTTTGtataaagaaaagcaaaaagaaaaactattttgtctGACTCGTTGGATGTGCGACCccttgtttttgtgtatgtgaaTCGTGAatcagtgtgtctgtgtgtgattgTTCGTCGCTTCAGTGGAATGTTGTGTTTGATTTTCGGTGCATCATACTGTAAGAAAgttccagttttttttcccacatatTTATCAGTTCGGTTCACGCAGTGGGTGCTATATTTCAAgttctcatttgcatatttttgatgctatcggaaaaaaaaaaaactgtcaagaGACCCTGCTTTTAGAAAGAGATTATGTAAATGAAGCCATCTGAAGTTACAGCTGACACTAAATAGTGATCTTAATCAACACAGGGCAACTGTTTATTCCTCCAGTAAATGGagttgaaaaatgcaaaaaaaaa

Function

NR:

description
PREDICTED: MKL/myocardin-like protein 2 isoform X3

GO: NA

KEGG:

id description
K22525 MKL; MKL/myocardin-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253312.1 True 4994 mRNA 0.48 16 9713064 9734340
XM_043253313.1 False 4570 mRNA 0.48 14 9713064 9728397

Neighbor

gene id symbol gene type direction distance location
zcchc4 zcchc4,LOC107657290,LOC107733462,LOC107738986 coding downstream 41784 9662758 ~ 9671280 (-)
zbtb4 LOC107733450,LOC107657284,LOC107584385,LOC107738964,LOC107556580,LOC107665872 coding downstream 97523 9601511 ~ 9615541 (-)
shbg LOC107733473,LOC107657285,LOC107584386,LOC107665891,LOC107738963 coding downstream 112392 9596295 ~ 9600672 (-)
neurl4 neurl4,LOC107733461,LOC107665870,LOC107738962,LOC107657283 coding downstream 118133 9576232 ~ 9594931 (-)
arhgef15b LOC107657276,LOC107733470,LOC107665871,LOC107723635,LOC107556583,LOC107584389 coding downstream 154158 9545267 ~ 9558906 (-)
LOC122355289 ercc4,LOC107734247,LOC107669240,LOC107692079 coding upstream 197 9734537 ~ 9740528 (-)
LOC122355272 cpped1,LOC107584109,LOC107669238,LOC107554009 coding upstream 9052 9743392 ~ 9756047 (-)
LOC122355287 fam20cb,fam20c,LOC107734234,LOC107699871,LOC107669229,LOC107731385,LOC108432010 coding upstream 53685 9788025 ~ 9805510 (-)
LOC122355804 nrg3b,LOC107566665,LOC107573948,LOC107678479,LOC107689960 coding upstream 404098 10138438 ~ 10144729 (-)
chac2 chac2,LOC107749368,LOC107686371 coding upstream 876308 10610648 ~ 10613502 (-)
G87034 NA non-coding downstream 77947 9632044 ~ 9635117 (-)
G87019 NA non-coding downstream 138539 9573634 ~ 9574525 (-)
G86916 NA non-coding downstream 413165 9299679 ~ 9299899 (-)
G86861 LOC107734218,LOC107660853,LOC107584076 non-coding downstream 844002 8867892 ~ 8869062 (-)
G86862 NA non-coding downstream 848801 8863441 ~ 8864263 (-)
G87055 NA non-coding upstream 28762 9763102 ~ 9767238 (-)
G87104 NA non-coding upstream 626537 10360877 ~ 10361414 (-)
LOC122355705 nrg3b,LOC107678479,LOC108426474,LOC107689960,LOC108273971,LOC107566665,LOC107387893 non-coding upstream 674999 10409339 ~ 10444778 (-)
G87125 svila,svil,LOC107584371 non-coding upstream 844414 10578754 ~ 10582536 (-)
G87164 NA non-coding upstream 870892 10605232 ~ 10606019 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other downstream 223752 9481559 ~ 9489312 (-)
LOC122355288 LOC107660874 other downstream 834933 8875617 ~ 8878131 (-)
trnar-ccu_66 NA other downstream 1025494 8687498 ~ 8687570 (-)
plbd1b LOC107578697 other downstream 1025516 8682443 ~ 8687548 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other downstream 1100619 8610552 ~ 8612445 (-)
cript cript,LOC107582781,LOC107728714 other upstream 1270666 11005006 ~ 11006954 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other upstream 1308548 11042888 ~ 11045889 (-)
G87489 NA other upstream 1587083 11321423 ~ 11322603 (-)
G87569 NA other upstream 2098539 11832879 ~ 11835612 (-)
G87608 NA other upstream 2214200 11948540 ~ 11951155 (-)

Expression


Co-expression Network