LOC122355256 (slc16a6a,LOC107554067,LOC107721990,LOC107692048)


Basic Information

Item Value
gene id LOC122355256
gene name slc16a6a,LOC107554067,LOC107721990,LOC107692048
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8832082 ~ 8837257 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253341.1
TTCAACATTGACTGTAAACCAATCCTCAACTTACTCAACAGCTGTAACCTCCCACCATAGAGGAGCACAGAGCTTGAGACAGTGGAAGCAGCACCACATGGACTATAGTACAGCGGTGGAGTAACACATTCCTGGTAAGGTCAAAATGGCACAGGGGATTTTCAGACTAAAAGGTTGCCTTGGCTCTAAAGAGTATTCAGAAGTCCCAGATGGTGGTTGGGGTTGGATTGTGGCTGTGGCCTTTTTTCTGGTGGAGGTGTTCACTTACGGGGTTATCAAAAGTTTTGGGATTTTTCTTAAGGACTTAATGAGTGACTTTGGCGAGAGCAACAGTCGAGTATCTTGGATCATTTCAATATGTGTCTTTGTTATGACTTTTACAGCTCCTTTATCAACAGTGCTAAGTAATCGATTTGGCTTCCAGCCAGTTGTGATGTTTGGAGGATTTCTCATATCTCTGGGTACAATCTCAACAGCATTCACCAGCTCCATCAATCAGATGTACCTCACTATAGGAATTGTGACAGGACTGGGCTACTGTCTGACATTTCTGCCAACCGTCACAATCTTGTCCCAGTACTTCAGCAGGCGTCGTTCTGTGGTCACAGCCATGGCCTCCACTGGAGAGTCATTTGCTATATTTGCTTTTGCTCCAGCCTTCACAGCTCTTAAGAACTTCATTGGCTGGAGGTACACAATGGTGGTGATTGGAACATTACAGGGCATCATTATTATCTGTGGGGCTCTGCTTCGTCCCATAGTCATCAAACCAAAGATATCTCTAACAGATACAGAGCAGAAGATAACATGCTCTCAACCTGAAGAACAAATGCATGGTTCTTCTAGCTCTGGAGATTCAGGTGTACAGTCACTTGATGAGCTGAAACGGGCCATCAAACCAGGGAAGGAACAGAAAGAAGCAAAACCACTTCAGATCCCTCCGAAACAACAGAACATCCCAACCAAAAATAAGCTCCTAGATTTGACTGTACTAAAAGAAGGCAGTTTCTTATGCTATTCCGCGTTTGGCCTTTTTGCAACGCTGGGCTTTTTCGCCCCACAGTTGTATGTGGTGGAGCTCAGTGCCAGTTTGGGTACAGAGAGGAACAAGGCTGCCTATATGCTGTCAACAATGGCCATTGCTGAGATCTTTGGACGTCTCTCCATCGGATGGGTCCTGAACTGGGGGCGTATCAGAAAGATCTTCGTACTTCTTGGATGCGTGTCACTTATGTGCCTGGTGCTGGTGTTTTTTACTGTGGTAAATGGCTTCTGGGGATTGGCAGTGTGCTGTGTGCTTTACGGCTTCTTACTTGGGAACATTGCATCCACACACATTCCAATGTTGGCTGAGGACGATGTCGTAGGGATCCAGAGGATGCCCTTGGCTGTAGGCGTCTACGTCTGTATTCAGAGCTTTGCAGGACTGGCTGGTCCACCATTAGGAGGTGTCCTTGTGGATGTTACACAAAATTACAGGGCTGCATTCTACTCCTGTGCTGTGGGAATGGGACTAGGTGCCGTCTTCCTTGGGCTCGTACGTCCAGCTAATACAGGTCAACTGTGCTTGAGAAGGGACAACGGACAGACTAACACCATGGTGGAGCAAGTGTCCAAAAGCAAACTGGAGGAAACTGTAGAAGTGGATAATCAAGATATTAAGTCTTGACTTC
>XM_043253342.1
ACAGCTGTAACCTCCCACCATAGAGGAGCACAGAGCTTGAGACAGTGGAAGCAGCACCACATGGACTATAGTACAGCGGTGGAGTAACACATTCCTGGTCAAAATGGCACAGGGGATTTTCAGACTAAAAGGTTGCCTTGGCTCTAAAGAGTATTCAGAAGTCCCAGATGGTGGTTGGGGTTGGATTGTGGCTGTGGCCTTTTTTCTGGTGGAGGTGTTCACTTACGGGGTTATCAAAAGTTTTGGGATTTTTCTTAAGGACTTAATGAGTGACTTTGGCGAGAGCAACAGTCGAGTATCTTGGATCATTTCAATATGTGTCTTTGTTATGACTTTTACAGCTCCTTTATCAACAGTGCTAAGTAATCGATTTGGCTTCCAGCCAGTTGTGATGTTTGGAGGATTTCTCATATCTCTGGGTACAATCTCAACAGCATTCACCAGCTCCATCAATCAGATGTACCTCACTATAGGAATTGTGACAGGACTGGGCTACTGTCTGACATTTCTGCCAACCGTCACAATCTTGTCCCAGTACTTCAGCAGGCGTCGTTCTGTGGTCACAGCCATGGCCTCCACTGGAGAGTCATTTGCTATATTTGCTTTTGCTCCAGCCTTCACAGCTCTTAAGAACTTCATTGGCTGGAGGTACACAATGGTGGTGATTGGAACATTACAGGGCATCATTATTATCTGTGGGGCTCTGCTTCGTCCCATAGTCATCAAACCAAAGATATCTCTAACAGATACAGAGCAGAAGATAACATGCTCTCAACCTGAAGAACAAATGCATGGTTCTTCTAGCTCTGGAGATTCAGGTGTACAGTCACTTGATGAGCTGAAACGGGCCATCAAACCAGGGAAGGAACAGAAAGAAGCAAAACCACTTCAGATCCCTCCGAAACAACAGAACATCCCAACCAAAAATAAGCTCCTAGATTTGACTGTACTAAAAGAAGGCAGTTTCTTATGCTATTCCGCGTTTGGCCTTTTTGCAACGCTGGGCTTTTTCGCCCCACAGTTGTATGTGGTGGAGCTCAGTGCCAGTTTGGGTACAGAGAGGAACAAGGCTGCCTATATGCTGTCAACAATGGCCATTGCTGAGATCTTTGGACGTCTCTCCATCGGATGGGTCCTGAACTGGGGGCGTATCAGAAAGATCTTCGTACTTCTTGGATGCGTGTCACTTATGTGCCTGGTGCTGGTGTTTTTTACTGTGGTAAATGGCTTCTGGGGATTGGCAGTGTGCTGTGTGCTTTACGGCTTCTTACTTGGGAACATTGCATCCACACACATTCCAATGTTGGCTGAGGACGATGTCGTAGGGATCCAGAGGATGCCCTTGGCTGTAGGCGTCTACGTCTGTATTCAGAGCTTTGCAGGACTGGCTGGTCCACCATTAGGAGGTGTCCTTGTGGATGTTACACAAAATTACAGGGCTGCATTCTACTCCTGTGCTGTGGGAATGGGACTAGGTGCCGTCTTCCTTGGGCTCGTACGTCCAGCTAATACAGGTCAACTGTGCTTGAGAAGGGACAACGGACAGACTAACACCATGGTGGAGCAAGTGTCCAAAAGCAAACTGGAGGAAACTGTAGAAGTGGATAATCAAGATATTAAGTCTTGACTTC

Function

symbol description
slc16a6a Enables monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Is expressed in head; intestinal bulb; liver; pronephros; and swim bladder. Orthologous to human SLC16A6 (solute carrier family 16 member 6).

NR:

description
PREDICTED: monocarboxylate transporter 7-like

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0015718 monocarboxylic acid transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008028 monocarboxylic acid transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253341.1 True 1673 mRNA 0.46 6 8832082 8837257
XM_043253342.1 False 1631 mRNA 0.47 6 8832082 8837220

Neighbor

gene id symbol gene type direction distance location
rgs9b rgs9b,LOC107660859,LOC107584086,LOC107734240,LOC107692097,LOC107709642,LOC108444257,LOC107554020 coding downstream 11020 8809082 ~ 8821062 (-)
mrtfab LOC107692050,LOC107734192,LOC107660860,LOC107584087,LOC107709647 coding downstream 23442 8781679 ~ 8808640 (-)
xrcc6 xrcc6,LOC107734244,LOC107584091,LOC107709651,LOC107554059 coding downstream 88476 8738942 ~ 8743606 (-)
josd1 josd1,LOC107660868,LOC107554019 coding downstream 93834 8733817 ~ 8738248 (-)
cbx7b LOC107660863,LOC107734182,LOC107584093,LOC107554058,LOC107692056,LOC107709653 coding downstream 99093 8728809 ~ 8732989 (-)
snx11 snx11,LOC107734201,LOC107584079,LOC107660856,LOC106589286 coding upstream 7854 8845111 ~ 8852234 (-)
snf8 snf8,LOC107554070,LOC107692042,LOC107734219,LOC107584075,LOC107660854 coding upstream 32808 8870065 ~ 8872539 (-)
nme2a nme2a,LOC107574626,LOC107558983,LOC107660852,LOC107734222 coding upstream 105854 8943111 ~ 8946818 (-)
eme1 eme1,LOC107584393,LOC107723632,LOC107705828 coding upstream 437108 9274365 ~ 9281289 (-)
nsfb nsfb,LOC107657277,LOC107665886,LOC108430134,LOC108273757 coding upstream 687029 9524286 ~ 9543828 (-)
G86848 gna13a,LOC107660858,LOC107584085,LOC107734232,LOC107554062,LOC107692049 non-coding downstream 8646 8821880 ~ 8823436 (-)
G86825 NA non-coding downstream 85005 8675646 ~ 8747077 (-)
G86826 NA non-coding downstream 87437 8680105 ~ 8744645 (-)
G86809 LOC107731413,LOC107584098,LOC107734194,LOC107663181 non-coding downstream 201875 8627094 ~ 8630207 (-)
G86798 NA non-coding downstream 203110 8597394 ~ 8628972 (-)
G86852 arsg,LOC107734203,LOC107660857 non-coding upstream 1094 8838351 ~ 8838612 (-)
G86853 NA non-coding upstream 3557 8840814 ~ 8841155 (-)
G86854 arsg,LOC107734203,LOC107660857,LOC107554066,LOC107692046 non-coding upstream 6130 8843387 ~ 8843774 (-)
G86856 NA non-coding upstream 15688 8852945 ~ 8853257 (-)
G86857 NA non-coding upstream 18072 8855329 ~ 8855541 (-)
trnar-ccu_66 NA other downstream 144512 8687498 ~ 8687570 (-)
plbd1b LOC107578697 other downstream 144534 8682443 ~ 8687548 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other downstream 219637 8610552 ~ 8612445 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other downstream 318817 8511403 ~ 8513265 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other downstream 472090 8334404 ~ 8359992 (-)
LOC122355288 LOC107660874 other upstream 38360 8875617 ~ 8878131 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other upstream 474396 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other upstream 644302 9481559 ~ 9489312 (-)
cript cript,LOC107582781,LOC107728714 other upstream 2167749 11005006 ~ 11006954 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other upstream 2205631 11042888 ~ 11045889 (-)

Expression


Co-expression Network