shbg (LOC107733473,LOC107657285,LOC107584386,LOC107665891,LOC107738963)


Basic Information

Item Value
gene id shbg
gene name LOC107733473,LOC107657285,LOC107584386,LOC107665891,LOC107738963
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 9596295 ~ 9600672 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253356.1
AGCCTCTGGTCTTTTGGGGAAGCTGTGTGCTAAACTCACTTCtcagagaaatagagagagggAGTCTGATGGCAGTTGGCTAAACAAAATCTTACATTCTGATTCCATTATTTCTACTCCTGTTCTAACCTCTGGAGGTAAAAGAGAATGAACTATCTGAAGAAACTGCTCATACTACTCTTAGGCCCGTACCTGATTCTGCTGTGCAGGAGAGTATCAAGTGAACAGATATCCAGCAAGGGAGTCATCAATCTTGCGCACAGACAGTCCAAATGGACCCCTTTAATGCAGATGAGTGCAAATCTCTCTGACATCTCAAGCATCAGATCTTTCTTTGAGTTTCGGACCCTTGACCCAGAGGGGGCCATCTTTTATGGAGACACCAAAGAAGGACAGGACTGGTTTGTGCTTTCACTGCGTGATGGTATACCTGAAATGCAGATTGGGAAAGCAGACGTCTTAGTGAGTGTAAAAGGAGGTAGAAAACTCAATGATGGGGCCTGGCACATGCTGGAGTTGCGCAGTGAGGGCAAATTTGTGGTGCTAGAGGTAAACAGCAATTTAGAGCTTGTAGTCGGTCTTCATTCTAAACTGACACAACACGAACTAACAGGAAAGATACGTCTTGCTCTTGGTGGAATGCTGGTGGACAAACAAAAGCTCTTCCATCCAtttGAGCCAGAAATGGATGCTTGTATAAGAGGAGGGCATTGGCTAAATCTCAGCACCCCCTGGGACACAGACTCAACATGGGAATCCCAGCCCTGCTTCTCTGAGATCAAGAAAGGCAGCTATTTTCCAGGAACTGGAGTGGCTATGTTTAATACATCTGATCTTCCTGAACTTAAGACGGAAGAGGCCGGTATCACAGTCGAGATCTTCGGATCCTGGACTGGGACAACGTTGAGTCTCCAAAGCACAGAATTTGAGTATATTTTGAAAGAGTTAGAAGGGAATAAAGAtgtcaagGAGATGCAGTTGGGCCTGAAAGAGGGATCGGAAAGTGTTGCCCCTCCCCATGAACCTGCTACACTTACTTTCACCATACTGAAACATTCACTTGTGGTAAACAGCAAACCAGAGCTTGAAACGGAAAGTCTGGACTTTTTCTCCATGTGGAAAAATGGGATGCTACTGACTTTTGGGGGAGTGCCAGGTGAAAGTGAGGAggcaaaaaatacacattaccTGCGTGGGTGTCTGGAGAAAATCCTTGTCCAAGGCCAGGTCATTGATCTCGATCGGGcattatacaaacacacagcagtttCATCTCACAGCTGTCCTACAGAAGCAATAAATGAACTCACTTAATAGATATACAAGGCATTCATCCTGGCAGTCTAAACTCTAAGATTTCCTTCATGTTCCACACATCTTATAACTGTCATAGGTAGGCctatttaaacatgcatttgacccaaaacttcaaaaaatttaataatggATCGCTATGTTATAATGAGCAATAAAATACATGTGAAATTAAATGGCACATCTTTCAAAGCACATTAATGAttgaaaaaaaggtaaatgcctttgtaaaaatgtacaaatttcaATGAACATCTTTTAGTCAACAAAATAAACCCAgatcaataaaaatgtcattgtttc

Function

NR:

description
sex hormone-binding globulin precursor

GO:

id name namespace
GO:0005497 androgen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253356.1 True 1617 mRNA 0.42 8 9596295 9600672

Neighbor

gene id symbol gene type direction distance location
neurl4 neurl4,LOC107733461,LOC107665870,LOC107738962,LOC107657283 coding downstream 1364 9576232 ~ 9594931 (-)
arhgef15b LOC107657276,LOC107733470,LOC107665871,LOC107723635,LOC107556583,LOC107584389 coding downstream 37389 9545267 ~ 9558906 (-)
nsfb nsfb,LOC107657277,LOC107665886,LOC108430134,LOC108273757 coding downstream 52467 9524286 ~ 9543828 (-)
eme1 eme1,LOC107584393,LOC107723632,LOC107705828 coding downstream 315006 9274365 ~ 9281289 (-)
nme2a nme2a,LOC107574626,LOC107558983,LOC107660852,LOC107734222 coding downstream 649477 8943111 ~ 8946818 (-)
zbtb4 LOC107733450,LOC107657284,LOC107584385,LOC107738964,LOC107556580,LOC107665872 coding upstream 839 9601511 ~ 9615541 (-)
zcchc4 zcchc4,LOC107657290,LOC107733462,LOC107738986 coding upstream 62086 9662758 ~ 9671280 (-)
LOC122355243 LOC107734216,LOC107669223,LOC107584111,LOC107692080,LOC107554034 coding upstream 112392 9713064 ~ 9734340 (-)
LOC122355289 ercc4,LOC107734247,LOC107669240,LOC107692079 coding upstream 133865 9734537 ~ 9740528 (-)
LOC122355272 cpped1,LOC107584109,LOC107669238,LOC107554009 coding upstream 142720 9743392 ~ 9756047 (-)
G87019 NA non-coding downstream 21770 9573634 ~ 9574525 (-)
G86916 NA non-coding downstream 296396 9299679 ~ 9299899 (-)
G86861 LOC107734218,LOC107660853,LOC107584076 non-coding downstream 727233 8867892 ~ 8869062 (-)
G86862 NA non-coding downstream 732032 8863441 ~ 8864263 (-)
G86858 NA non-coding downstream 740185 8855673 ~ 8856110 (-)
G87034 NA non-coding upstream 31372 9632044 ~ 9635117 (-)
G87055 NA non-coding upstream 162430 9763102 ~ 9767238 (-)
G87104 NA non-coding upstream 760205 10360877 ~ 10361414 (-)
LOC122355705 nrg3b,LOC107678479,LOC108426474,LOC107689960,LOC108273971,LOC107566665,LOC107387893 non-coding upstream 808667 10409339 ~ 10444778 (-)
G87125 svila,svil,LOC107584371 non-coding upstream 978082 10578754 ~ 10582536 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other downstream 106983 9481559 ~ 9489312 (-)
LOC122355288 LOC107660874 other downstream 718164 8875617 ~ 8878131 (-)
trnar-ccu_66 NA other downstream 908725 8687498 ~ 8687570 (-)
plbd1b LOC107578697 other downstream 908747 8682443 ~ 8687548 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other downstream 983850 8610552 ~ 8612445 (-)
cript cript,LOC107582781,LOC107728714 other upstream 1404334 11005006 ~ 11006954 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other upstream 1442216 11042888 ~ 11045889 (-)
G87489 NA other upstream 1720751 11321423 ~ 11322603 (-)
G87569 NA other upstream 2232207 11832879 ~ 11835612 (-)
G87608 NA other upstream 2347868 11948540 ~ 11951155 (-)

Expression


Co-expression Network