cbx7b (LOC107660863,LOC107734182,LOC107584093,LOC107554058,LOC107692056,LOC107709653)


Basic Information

Item Value
gene id cbx7b
gene name LOC107660863,LOC107734182,LOC107584093,LOC107554058,LOC107692056,LOC107709653
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8728809 ~ 8732989 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253373.1
ATCCTCTGTGTGGCGCACGGGGGCGCGCTGCACGCTGCAGATGTGTCGCAGATTTAAAAAGTCACTGTACTCATCTAGTACAAGGAAATGGAGCGGTGCAAAGCATAAAATACTGAATTGTCAACAAGGCAGCGGAAGAGCGGGAACGCGTGCAGCCATTGTAACAGCGCACGGGATTTGCAATTCATAGTTACTTTAACGACCAGAAGGAAAAGCGCAGAGACACGTTGACAGCTACTTCATTATTTTTAGGGGGACAACTTAACTGATGGAACTGTCGGCAATCGGCGAGCAAGTGTTCGCCGTGGAATCAATCATAAAGAAAAGAGTTAGAAAGGGTCATGTCGAATATTTATTGAAGTGGAAGGGGTGGCCTCCCAaGTACAGCACATGGGAGCCAGAGGAGCACATTCTTGACCCTCGACTGGTTTTAGCATACGAGGAAAAagaacagagagaaaggTCGGTGAGGTGGCGTAAAAGAGGCCCAAAACCGAAAAGACTCTTCATGCAGAGAAACATTTACGCAATGGATCTACGCAGCGCACACAAAGATACGGGGAACACTTCGGCACATCTGCCGCTATCGCTTGACCCAAGGTTCCAGTCCACAGGGGCTTGTATATATCGACAATTAACCCACcacaagaaaaagaagaaagcatcCAGAGAGACCTCTGAGGAAGAATGGGACAGAAGagaagatgatgatgacgacgacgatgatgatgatgatgattacgACGATGATGATGAGGGGGTTatggaagaggaggaggaagaagaagaagaggacaCAAGACAAGGAGGAACTAAAACTGGCAGCAACACTTTAAACAAGCGTGTCAGGAGAGGTTGCTGGACTCAATCCACTGGATCAGACGCAATGACTATTTCTCCCTTACCTGAAGACTGGAGTCCAGTTATGGGCCCAGAGGAGGTCATTGTGACAGATATCACCATCAACTCACTGACTGTGACTTTTAGAGAGGCCTTGGTAGCAAGGGGGTTCTTCAGGAGCTGGGAGATGGAGATCTGACATCACAGAGACTGAGGATGGTCAGAGCCGGGAAAGAGAATTGGTACATTCTTGTTTTGCATTGTTGATTATGTGCTTGCACAACTTCCGCCAACGTTTCGGACTACGTTAATTTGCACTATTAGTTCTAGTTGAGTTAAAACCTTCCGAAATGTTGTTTCAGAGATTACAATCAAATTAACAGTAACAGGTCATTTAATGGCAGTAACTGATAGTATTTgatcatgaaaacaaaaaaatcaagccAGTTCTCCGACACTggttttaatagtgtttttagTTTACAGATTTGGCTAACTGGGATAAATGTAATTTGGTGGGGTCATATATTTGCATGAAATATACATAATTCTAGTTCAGAGTAGCACAGTGAAGTATTCCTAAAAGCCAATATGTCACATATGTCTAAACATATTCAcattacatgtatatgtgtgtgtgtgtgtatatatatatatacaggtatatatatacacacacacacatatatatactcgGTGAACATAATCTAATCATAATCACTTTAAATTGCACACCTCTCACAGAATTAGTGGCCTCTTGATACTcaaaatatgtgaaatacaACTTTGGAAAATAGCTTTTCAACACTTTGCTGTCCTTGACACTTCATAAGCAAAATATTATAGTGTGAAACAAAATATCCTGCACTCCTTGCACAGTTATGTTCTAACCTTTGAGCATAATTATGTGTATGGAataaagttgcattttattttttgtcaacaCTATGACTTGCTAGTATCTCATCTATTTGCAGTGTTTGCGCATTTTTTTGTGACTTGCACCACCTTGCACAGTAGTCTATGTTGTAGATTTAACTTGACtattttctgtgttattttagtCCGAGATGAAAACTGAGACatgaagataaaaaaacaatctaTATCGAGGTGAATGTATATTTAGCCTCTAGGAACATCCATCTCTGGGGGCTCAACTGTTGAATATTTGACTTCATGTGACCTGTATATATTTGATAGACTTATGTCTGTGCCAAATGTCTGTGGTTGCTTTTGCTATTCAGAGTATTTGcactttaaaatggaaaacttgGTATTATGATGCCATTAATAAAACCTCGGTGTAACTCTA
>XM_043253374.1
GATCCTCTGTGTGGCGCACGGGGGCGCGCTGCACGCTGCAGATGTGTCGCAGATTTAAAAAGTCACTGTACTCATCTAGTACAAGGAAATGGAGCGGTGCAAAGCATAAAATACTGAATTGTCAACAAGGCAGCGGAAGAGCGGGAACGCGTGCAGCCATTGTAACAGCGCACGGGATTTGCAATTCATAGTTACTTTAACGACCAGAAGGAAAAGCGCAGAGACACGTTGACAGCTACTTCATTATTTTTAGGGGGACAACTTAACTGATGGAACTGTCGGCAATCGGCGAGCAAGTGTTCGCCGTGGAATCAATCATAAAGAAAAGAGTTAGAAAGGGTCATGTCGAATATTTATTGAAGTGGAAGGGGTGGCCTCCCAaGTACAGCACATGGGAGCCAGAGGAGCACATTCTTGACCCTCGACTGGTTTTAGCATACGAGGAAAAagaacagagagaaaggTCGGTGAGGTGGCGTAAAAGAGGCCCAAAACCGAAAAGACTCTTCATGCAGAGAAACATTTACGCAATGGATCTACGCAGCGCACACAAAGATACGGGGAACACTTCGGCACATCTGCCGCTATCGCTTGACCCAAGGTTCCAGTCCACAGGGGCTTGTATATATCGACAATTAACCCACcacaagaaaaagaagaaagcatcCAGAGAGACCTCTGAGGAAGAATGGGACAGAAGagaagatgatgatgacgacgacgatgatgatgatgatgattacgACGATGATGATGAGGGGGTTatggaagaggaggaggaagaagaagaagaggacaCAAGACAAGGAGGAACTAAAACTGGCAGCAACACTTTAAACAAGCGTGTCAGGAGAGGTTGCTGGACTCAATCCACTGGATCAGACGCAATGACTATTTCTCCCTTACCTGAAGACTGGAGTCCAGTTATGGGCCCAGAGGAGGTCATTGTGACAGATATCACCATCAACTCACTGACTGTGACTTTTAGAGAGGCCTTGGTAGCAAGGGGGTTCTTCAGGAGCTGGGAGATGGAGATCTGACATCACAGAGACTGAGGATGGTCAGAGCCGGGAAAGAGAATTGtCCGAGATGAAAACTGAGACatgaagataaaaaaacaatctaTATCGAGGTGAATGTATATTTAGCCTCTAGGAACATCCATCTCTGGGGGCTCAACTGTTGAATATTTGACTTCATGTGACCTGTATATATTTGATAGACTTATGTCTGTGCCAAATGTCTGTGGTTGCTTTTGCTATTCAGAGTATTTGcactttaaaatggaaaacttgGTATTATGATGCCATTAATAAAACCTCGGTGTAACTCTA

Function

NR:

description
chromobox protein homolog 7-like

GO: NA

KEGG:

id description
K11454 CBX7; chromobox protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253373.1 True 2155 mRNA 0.41 6 8728809 8732988
XM_043253374.1 False 1334 mRNA 0.46 7 8728809 8732989

Neighbor

gene id symbol gene type direction distance location
l3mbtl2 LOC107734235,LOC107584094,LOC107663177,LOC107692058,LOC107709654,LOC107554057 coding downstream 23725 8698493 ~ 8705084 (-)
kctd17 kctd17,LOC107584096,LOC107734225,LOC107692061 coding downstream 46824 8668396 ~ 8681985 (-)
LOC122355697 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding downstream 89926 8637411 ~ 8638883 (-)
LOC122355698 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding downstream 91897 8634892 ~ 8636912 (-)
cby1 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 coding downstream 116348 8611249 ~ 8612461 (-)
josd1 josd1,LOC107660868,LOC107554019 coding upstream 828 8733817 ~ 8738248 (-)
xrcc6 xrcc6,LOC107734244,LOC107584091,LOC107709651,LOC107554059 coding upstream 5953 8738942 ~ 8743606 (-)
mrtfab LOC107692050,LOC107734192,LOC107660860,LOC107584087,LOC107709647 coding upstream 48690 8781679 ~ 8808640 (-)
rgs9b rgs9b,LOC107660859,LOC107584086,LOC107734240,LOC107692097,LOC107709642,LOC108444257,LOC107554020 coding upstream 76093 8809082 ~ 8821062 (-)
LOC122355256 slc16a6a,LOC107554067,LOC107721990,LOC107692048 coding upstream 99093 8832082 ~ 8837257 (-)
G86809 LOC107731413,LOC107584098,LOC107734194,LOC107663181 non-coding downstream 98602 8627094 ~ 8630207 (-)
G86798 NA non-coding downstream 99837 8597394 ~ 8628972 (-)
G86807 NA non-coding downstream 102480 8623297 ~ 8626329 (-)
G86775 NA non-coding downstream 190603 8535973 ~ 8538206 (-)
G86608 NA non-coding downstream 384200 8344336 ~ 8344609 (-)
G86848 gna13a,LOC107660858,LOC107584085,LOC107734232,LOC107554062,LOC107692049 non-coding upstream 88891 8821880 ~ 8823436 (-)
G86852 arsg,LOC107734203,LOC107660857 non-coding upstream 105362 8838351 ~ 8838612 (-)
G86853 NA non-coding upstream 107825 8840814 ~ 8841155 (-)
G86854 arsg,LOC107734203,LOC107660857,LOC107554066,LOC107692046 non-coding upstream 110398 8843387 ~ 8843774 (-)
G86856 NA non-coding upstream 119956 8852945 ~ 8853257 (-)
trnar-ccu_66 NA other downstream 41239 8687498 ~ 8687570 (-)
plbd1b LOC107578697 other downstream 41261 8682443 ~ 8687548 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other downstream 116364 8610552 ~ 8612445 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other downstream 215544 8511403 ~ 8513265 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other downstream 368817 8334404 ~ 8359992 (-)
LOC122355288 LOC107660874 other upstream 142628 8875617 ~ 8878131 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other upstream 578664 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other upstream 748570 9481559 ~ 9489312 (-)
cript cript,LOC107582781,LOC107728714 other upstream 2272017 11005006 ~ 11006954 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other upstream 2309899 11042888 ~ 11045889 (-)

Expression


Co-expression Network