nme2a (nme2a,LOC107574626,LOC107558983,LOC107660852,LOC107734222)


Basic Information

Item Value
gene id nme2a
gene name nme2a,LOC107574626,LOC107558983,LOC107660852,LOC107734222
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8943111 ~ 8946818 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253379.1
GATCACTATTCGCGGTTTAAGCCGTCAGTACGGGCTTGATCTCTCTCAGTCACTGACATGTAATTAGCGATGGGGTCAGGGGCTTCCTCAGCCAAACCCCCCTCCACACCTGCACCCCGGTGTCCCAAACGCTCGACGGCcccAATGTCTGGAAATGAAGAGCGCACTTTCATTGCCATCAAGCCCGATGGAGTGCAGAGGGGACTTGTCGGAGAGATCATCAAGCGTTTTGAACAGAAGGGCTTCAAGTTAGTTGCTATGAAGTTAATCCAGGCCGATGAGGATCTTCTGAGACAGCATTACTGTGACCTGAAGGATCGGCCTTTCTTCCCAGGTCTTGTCAGTTATATGTCCTCTGGCCCTGTGGTTGCCATGGTGTGGGAGGGTTTTAACGTTATAAAAACCGGTAGAGTAATGCTCGGCGAGACTAATCCCATTGACTCCAAGCCTGGGACTATCCGAGGTGACTTTTGCGTTCAGGTTGTCCGGAACATCATTCACGGCAGTGATTCTGTCGAAAGTGCCAACGCCGAGATCAACCTGTGGTTCAAACCAGAAGAGATCTCTGACTACACCAAATGTCAGGAAAGCTGGATCAACGGCTGAACGCATTCTTCtttttctgcactttttttcccctcccggGTGCTTCTGATTTAAATCAAcccgttttcatttttattcccaCTGTTTCTGGTGTTTGTCTttacaataaaaccaaaaatcatTTCTT
>XM_043253380.1
CGTGGATTAGTGAAAGCACACGCGTGAGGAATCAACTTGACTCGTGGACTGTCGTcagaaaatcccAATGTCTGGAAATGAAGAGCGCACTTTCATTGCCATCAAGCCCGATGGAGTGCAGAGGGGACTTGTCGGAGAGATCATCAAGCGTTTTGAACAGAAGGGCTTCAAGTTAGTTGCTATGAAGTTAATCCAGGCCGATGAGGATCTTCTGAGACAGCATTACTGTGACCTGAAGGATCGGCCTTTCTTCCCAGGTCTTGTCAGTTATATGTCCTCTGGCCCTGTGGTTGCCATGGTGTGGGAGGGTTTTAACGTTATAAAAACCGGTAGAGTAATGCTCGGCGAGACTAATCCCATTGACTCCAAGCCTGGGACTATCCGAGGTGACTTTTGCGTTCAGGTTGTCCGGAACATCATTCACGGCAGTGATTCTGTCGAAAGTGCCAACGCCGAGATCAACCTGTGGTTCAAACCAGAAGAGATCTCTGACTACACCAAATGTCAGGAAAGCTGGATCAACGGCTGAACGCATTCTTCtttttctgcactttttttcccctcccggGTGCTTCTGATTTAAATCAAcccgttttcatttttattcccaCTGTTTCTGGTGTTTGTCTttacaataaaaccaaaaatcatTTCTT

Function

symbol description
nme2a Predicted to enable nucleoside diphosphate kinase activity. Predicted to act upstream of or within nucleotide metabolic process. Is expressed in several structures, including digestive system; female organism; gonad; male organism; and visual system. Human ortholog(s) of this gene implicated in neuroblastoma; ovary epithelial cancer; and teratoma. Orthologous to human NME1 (NME/NM23 nucleoside diphosphate kinase 1) and NME2 (NME/NM23 nucleoside diphosphate kinase 2).

NR:

description
PREDICTED: nucleoside diphosphate kinase A-like

GO:

id name namespace
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0006183 GTP biosynthetic process biological_process
GO:0006228 UTP biosynthetic process biological_process
GO:0006241 CTP biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function

KEGG:

id description
K00940 ndk, NME; nucleoside-diphosphate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253379.1 True 733 mRNA 0.48 5 8943111 8946320
XM_043253380.1 False 656 mRNA 0.46 5 8943111 8946818

Neighbor

gene id symbol gene type direction distance location
snf8 snf8,LOC107554070,LOC107692042,LOC107734219,LOC107584075,LOC107660854 coding downstream 70572 8870065 ~ 8872539 (-)
snx11 snx11,LOC107734201,LOC107584079,LOC107660856,LOC106589286 coding downstream 90877 8845111 ~ 8852234 (-)
LOC122355256 slc16a6a,LOC107554067,LOC107721990,LOC107692048 coding downstream 105854 8832082 ~ 8837257 (-)
rgs9b rgs9b,LOC107660859,LOC107584086,LOC107734240,LOC107692097,LOC107709642,LOC108444257,LOC107554020 coding downstream 122049 8809082 ~ 8821062 (-)
mrtfab LOC107692050,LOC107734192,LOC107660860,LOC107584087,LOC107709647 coding downstream 134471 8781679 ~ 8808640 (-)
eme1 eme1,LOC107584393,LOC107723632,LOC107705828 coding upstream 327547 9274365 ~ 9281289 (-)
nsfb nsfb,LOC107657277,LOC107665886,LOC108430134,LOC108273757 coding upstream 577468 9524286 ~ 9543828 (-)
arhgef15b LOC107657276,LOC107733470,LOC107665871,LOC107723635,LOC107556583,LOC107584389 coding upstream 598449 9545267 ~ 9558906 (-)
neurl4 neurl4,LOC107733461,LOC107665870,LOC107738962,LOC107657283 coding upstream 629414 9576232 ~ 9594931 (-)
shbg LOC107733473,LOC107657285,LOC107584386,LOC107665891,LOC107738963 coding upstream 649477 9596295 ~ 9600672 (-)
G86861 LOC107734218,LOC107660853,LOC107584076 non-coding downstream 74049 8867892 ~ 8869062 (-)
G86862 NA non-coding downstream 78848 8863441 ~ 8864263 (-)
G86858 NA non-coding downstream 87001 8855673 ~ 8856110 (-)
G86857 NA non-coding downstream 87570 8855329 ~ 8855541 (-)
G86856 NA non-coding downstream 89854 8852945 ~ 8853257 (-)
G86916 NA non-coding upstream 352861 9299679 ~ 9299899 (-)
G87019 NA non-coding upstream 626816 9573634 ~ 9574525 (-)
G87034 NA non-coding upstream 685226 9632044 ~ 9635117 (-)
G87055 NA non-coding upstream 816284 9763102 ~ 9767238 (-)
G87104 NA non-coding upstream 1414059 10360877 ~ 10361414 (-)
LOC122355288 LOC107660874 other downstream 64980 8875617 ~ 8878131 (-)
trnar-ccu_66 NA other downstream 255541 8687498 ~ 8687570 (-)
plbd1b LOC107578697 other downstream 255563 8682443 ~ 8687548 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other downstream 330666 8610552 ~ 8612445 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other downstream 429846 8511403 ~ 8513265 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other upstream 364835 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other upstream 534741 9481559 ~ 9489312 (-)
cript cript,LOC107582781,LOC107728714 other upstream 2058188 11005006 ~ 11006954 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other upstream 2096070 11042888 ~ 11045889 (-)
G87489 NA other upstream 2374605 11321423 ~ 11322603 (-)

Expression


Co-expression Network