tectb (tectb,LOC107755437,LOC107702437,LOC107566341,LOC107581573,LOC107684045,LOC107722201)


Basic Information

Item Value
gene id tectb
gene name tectb,LOC107755437,LOC107702437,LOC107566341,LOC107581573,LOC107684045,LOC107722201
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13864826 ~ 13872555 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253475.1
TTTTGATAACCAGTTTCGTGTAACCTTTCAGAGATACTAGTAAAAACAAGTGGACtaaaaaattgacaaaaataaatgttggaTCTCAGGAagAAGAACCGCTCAGGAACCATGCAAACCTTCTGCTAGAGACCTGAGCCAACACTTCTTCTGGATCCAGCATTGGGATGTTTTATGAAATGGCAGCTGTTGGTGTAATCTTCATTCTCCTTCCCATGACATGGGCCTGTGCCCCTCAGAAAGCTgATTACGTCATGGTGTCATGTTTTCCCAATGCCATCATTGCAAACGTGCCAGAATGTCCATATGGATGGGAGATTGGCCAGCTGTCACTAGGCGGTGTTTGCTACTCCGGCATTAACACTCCGGGCTTCTATCGTTTCACAATCCCAGACCTGACTCCTAAAAATCACTCGTACTGCGGCACCATGTCCGAGTATGTAGGAGGCAAAGATCCACGGTACATATTCTACAACTCAATAGTATCCAACGACTCCTCTCTCACTGTCCGGAACCAGCCCGTGAACTACACATTCAGTTGCACCTATAAAGCGGCTTATCTGGTTaacaatgctgtttttagtcaAAGCGTCTTTACTAAACCCTCTGCTTCTTCCAGAGTGGCAACAGTTTATGTCAACAACGGGAGTTTAGGTTCTTTTAAGTCTCAGTTGTCTATGAATGTGTTCACAAACTCAAAGTTCCTCTATGCAAAAGATGCACCATATGTGATTGACACGTCTGAGATCGGATCTGAGGTGTTCATTGGCATTGAAGCAAAAGGACTTAGTAATCGATTCAAAGTAGTAATAACAAATTGCTGGGCAACACCTACTCCATATTCAACAGACAGGAAGCGATGGACTTTAATTCAGAACAGCTGCTCTTTAGACAATACGGTCACCATATTTGAAAATGCCAAAGACAGTCGGTCCATGTTCAAGTTCAACTCGTTCCGCTTCCAGCGGCTAGAGAAAGTTTCCACTGTGTGGCTCCATTGTGAGGTCCAAGTATGTGATGGGGAGAAGCTATTCTGTCAGCCGACTCCATGTACATCAAGAAGCACTGAATTTGAACCTGATCCGAATGGAGGTATCCTGACCATGGAGTTTCAAGTCAGAGCACAACACTCCTCTAGTTATATGCATCCTGCAGGCCCATTTTTGTGCCTGCTGTCCATATTTCTACTGAATGAATTTTTAGGATACTTCAGTTGGTAATGGTGCCAGATGTGGGTCATTCAAATGCAATGAATCATGCTTTTGCACTCACACAATTACAtacaaatacttaaaaatagacacgcatgcatgcatacacccACACACAGCAACCATACGTGTCTCAGGGAGTGTATCGACACATTCCTTTAAATGTTCACTTaagtttttttacactttttttttaaatttgtgtatTCCTTGCATGGATATTGGTAGAACAAGAAAAGAATCTCTGAAGAAGGTATTATCAATTGTTACTCTTTAGTTTAACAGACAGAGAcatgttcttgttt
>XM_043253476.1
TTTTGATAACCAGTTTCGTGTAACCTTTCAGAGATACTAGTAAAAACAAGTGGACtaaaaaattgacaaaaataaatgttggaTCTCAGGAagAAGAACCGCTCAGGAACCATGCAAACCTTCTGCTAGAGACCTGAGCCAACACTTCTTCTGGATCCAGCATTGGGATGTTTTATGAAATGGCAGCTGTTGGTGTAATCTTCATTCTCCTTCCCATGACATGGGCCTGTGCCCCTCAGAAAGCTgATTACGTCATGGTGTCATGTTTTCCCAATGCCATCATTGCAAACGTGCCAGAATGTCCATATGGATGGGAGATTGGCCAGCTGTCACTAGGCGGTGTTTGCTACTCCGGCATTAACACTCCGGGCTTCTATCGTTTCACAATCCCAGACCTGACTCCTAAAAATCACTCGTACTGCGGCACCATGTCCGAGTATGTAGGAGGCAAAGATCCACGGTACATATTCTACAACTCAATAGTATCCAACGACTCCTCTCTCACTGTCCGGAACCAGCCCGTGAACTACACATTCAGTTGCACCTATAAAGCGGCTTATCTGGTTaacaatgctgtttttagtcaAAGAGTGGCAACAGTTTATGTCAACAACGGGAGTTTAGGTTCTTTTAAGTCTCAGTTGTCTATGAATGTGTTCACAAACTCAAAGTTCCTCTATGCAAAAGATGCACCATATGTGATTGACACGTCTGAGATCGGATCTGAGGTGTTCATTGGCATTGAAGCAAAAGGACTTAGTAATCGATTCAAAGTAGTAATAACAAATTGCTGGGCAACACCTACTCCATATTCAACAGACAGGAAGCGATGGACTTTAATTCAGAACAGCTGCTCTTTAGACAATACGGTCACCATATTTGAAAATGCCAAAGACAGTCGGTCCATGTTCAAGTTCAACTCGTTCCGCTTCCAGCGGCTAGAGAAAGTTTCCACTGTGTGGCTCCATTGTGAGGTCCAAGTATGTGATGGGGAGAAGCTATTCTGTCAGCCGACTCCATGTACATCAAGAAGCACTGAATTTGAACCTGATCCGAATGGAGGTATCCTGACCATGGAGTTTCAAGTCAGAGCACAACACTCCTCTAGTTATATGCATCCTGCAGGCCCATTTTTGTGCCTGCTGTCCATATTTCTACTGAATGAATTTTTAGGATACTTCAGTTGGTAATGGTGCCAGATGTGGGTCATTCAAATGCAATGAATCATGCTTTTGCACTCACACAATTACAtacaaatacttaaaaatagacacgcatgcatgcatacacccACACACAGCAACCATACGTGTCTCAGGGAGTGTATCGACACATTCCTTTAAATGTTCACTTaagtttttttacactttttttttaaatttgtgtatTCCTTGCATGGATATTGGTAGAACAAGAAAAGAATCTCTGAAGAAGGTATTATCAATTGTTACTCTTTAGTTTAACAGACAGAGAcatgttctt

Function

symbol description
tectb Predicted to be an extracellular matrix structural constituent. Acts upstream of or within otolith development. Predicted to be active in cell surface and extracellular space. Is expressed in brain; macula communis; and pleuroperitoneal region. Orthologous to human TECTB (tectorin beta).

NR:

description
beta-tectorin

GO:

id name namespace
GO:0048840 otolith development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253475.1 True 1516 mRNA 0.42 12 13864826 13872555
XM_043253476.1 False 1482 mRNA 0.42 12 13864830 13872555

Neighbor

gene id symbol gene type direction distance location
acsl5 acsl5,LOC107702457,LOC107566323,LOC107722228,LOC107755526,LOC107581566,LOC107684041 coding downstream 10053 13846173 ~ 13854773 (-)
vti1a vti1a,LOC107702459,LOC106589328,LOC107566351 coding downstream 25370 13719671 ~ 13839456 (-)
crygmxl2 crygmxl2,LOC107566855,LOC107708427,LOC107702435,LOC107581669,LOC107684145 coding downstream 307736 13555693 ~ 13557090 (-)
crygmx crygmx,LOC107755411,LOC107566847,LOC107684144,LOC107581668 coding downstream 309801 13553556 ~ 13555025 (-)
casp7 casp7,LOC107707870,LOC107684033,LOC107581558,LOC107566160 coding downstream 420094 13436907 ~ 13444732 (-)
nat9 LOC107702469,LOC107566461,LOC107581577,LOC107722187 coding upstream 128123 14000678 ~ 14003093 (-)
grin2cb grin2c,LOC107755516,LOC107702470,LOC107722186,LOC107684146,LOC107581635 coding upstream 171016 14043571 ~ 14081743 (-)
rab40b rab40b,LOC107702472,LOC107722231,LOC107581578,LOC107566485,LOC107755515,LOC107684050,LOC108443562 coding upstream 217289 14089844 ~ 14102103 (-)
LOC122355098 cox11,LOC107702474,LOC107566498,LOC107755514,LOC108443564,LOC102229253 coding upstream 230377 14102932 ~ 14105922 (-)
si:ch73-256g18.2 NA coding upstream 271048 14143603 ~ 14146727 (-)
LOC122355666 NA non-coding downstream 152285 13709055 ~ 13712541 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding downstream 403581 13460145 ~ 13461245 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding downstream 404961 13458456 ~ 13459865 (-)
G88019 NA non-coding downstream 430701 13433894 ~ 13434125 (-)
G88003 NA non-coding downstream 496506 13365953 ~ 13368320 (-)
G88205 NA non-coding upstream 121105 13993660 ~ 13994186 (-)
G88206 NA non-coding upstream 121817 13994372 ~ 13995952 (-)
G88233 NA non-coding upstream 259364 14131919 ~ 14133138 (-)
G88355 NA non-coding upstream 525805 14398360 ~ 14398928 (-)
G88384 NA non-coding upstream 808362 14680917 ~ 14684300 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other downstream 173486 13609420 ~ 13691340 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other downstream 324525 13523668 ~ 13540301 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other downstream 432631 13424308 ~ 13432195 (-)
G87845 LOC107675011 other downstream 1112148 12751904 ~ 12752678 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other downstream 1189354 12649383 ~ 12675472 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other upstream 100327 13972882 ~ 13976511 (-)
G88250 LOC107702476 other upstream 275492 14148047 ~ 14150005 (-)
G88365 NA other upstream 669011 14541566 ~ 14643780 (-)
LOC122355209 NA other upstream 830013 14702568 ~ 14706251 (-)
ndufaf8 NA other upstream 1421278 15293833 ~ 15295240 (-)

Expression


Co-expression Network