mrtfba (LOC107734216,LOC107669223,LOC107584111,LOC107692080,LOC107554034)


Basic Information

Item Value
gene id mrtfba
gene name LOC107734216,LOC107669223,LOC107584111,LOC107692080,LOC107554034
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8303767 ~ 8325041 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253545.1
AGCGCCCGCTGATGGTGACTGGCCCGAAACACCTCAGTTTGCGTCACAGAGTTCAGACGAACAGACTAGCATCGGCCATCTTacttcctcaaaaaaaaaaaaaaaaacttcagtcccaaagaaaaacagaatcCCTGGATACATGGGTGACCACATCAAGGACAGTTATGGAGCATTAAACCAAGGGGCGACGACAAGCAAGCTAGACACAGCTCTAGGGAACAGGAAACTGAAGTGAGGAGCTTCCTGTGACCATATCGTCCGCTGATCCCCAGCGAAACCCTTGACTCCTCGCTGAGGAGACATGGAGGAGCAGGGGGATGCTGGGATTGGGGGTTTGTTGGCGTCCAGCCCGCAGAGTGAGGCTGTAACCCATGAGATGGGCGAACTGTCCCTGCACCCCAGCCAGAGGCTGCCCCCCCTCAACGAACGCAAAAATGTTCTCCAGCTGAGGCTACAGCAGAGACGTACCCGCGAGCAGCTCGTTGATCAGGGAATCATGCCACCCCTGAAGAGCCCTGCGGCGTTCCATGAACAGATCCGCAGCCTTGAGAGAGCCAGGACTGAAAATTTCCTAAAGCACAAAATACGCAGCCGCCCAGAAAGGGCTGAGTTGGTCCGCATGCACATCTTACAAGAGACGGTGGCAGAGCCTTCTCTGCAGGCCACTCAGCTGAAATTGAAGAGAGCTCGATTGGCTGATGACCTGAATGAGAAGATTGCTCAACGCCCTGGCCCCATGGAGCTGGTGGAGAAGAACATCCTGCCTGTGGACTCCAGCGTCAAGGAAGCCATCATTGATGGTCAGATGCAGTACCCTAGAATTCTAGAGGAACCAGCCGATGAAGACAGTGGAGATGCGTTTTCACCTGAGCAGCCAGCCAGTCAGGAGTCCCAGGGTTCTGCAGCTTCTCCTGGGGAGGTCCGGGCCATTGAAGAGTCCTCACCATTGCCTAACAACTTCTTAAAGCACTTTCCTGCAGTGACCACCACCACAACAGATTTCCTCAAGCCTTTTTCCACCAATGAGCAATTAATTAGTCCTCCAGCACCCATGCCACAGCTAATCACCGTGGCCCCTGTGAAGTCTGGACCCACCCTTGTAAAGCAAAGTCAGCCTAAGTTACCTGGGGACAAGAGCCGCAGCAAGAAGAGTAAGGAGGCCAAGCCACGTgtgaaaaagttaaaatatcatCAGTACATTCCCCCAGACCAGAAACAAGAACTCAACCAAGCTCCGATGGACTCCTCATATGCTCGTTTACTACAACAACAGCAGCTATTTTTGCAGCTACAGATCCTGAgccaacaacaacagcagcactACAACTACCAGACAATCCTTCCTGCACCTCTCAAGCCTGTAATTGAAGGCCAAAACAGTGGTGCCACAGTGGCTATCAACAGCACTAGCAGCCTTCCTGCGTCCATTGTGGTGTCTCTGCCCACAGCGACACCTGTGCGGCCCAACAGCACCCTTTCCAACCGCAAGGCAGGCATACTACCTGCCAACCTAGAGGAGATGAAgGTGGCAGAGCTGAAAATGGAGTTAAAGTTACGTGGTCTTCCGGTGTCTGGAACAAAAACAGACCTAATTGAACGGCTTAAGCCTTTCCAAGAAAACACTGCACCCAGCTGCACAGGACCTAACACACAGTCCTGCAGCACACCTATGGAGGTGTCCAGCACCACTACAACCCTATCCCCCATCCAGCAGCCCTCTGAAAATCTAAGCTCCACTCCACCTGTGTCTCCTGGTTCTTCAGAGCTTCACAGCAAAGAAGAAGCATACATGGAGGGACAGGCAGAGGGCCAAAACCGAAGTTTAGTGACGGCAGCTCCTGTTCCTGAGGAACAAGACCGGAGACTACACGAAAAGGAGCGACAGATTGAGGAACTGCTGCGTAAATTGGAGCAGGAGCAGAAGCTGGTGGAGGAACTGAAGATGCAGCTAGAGGTGGAAAAAAGGTGTGGACAGGTTCCACCTGCAGAAAATAACAACGCTTCCAGTCCAGCCACTATGTTGACGTctgtcaaaacagaaaacactgtcCCTCCTAACTGCACACTGAGTCCACACACTACGCCAACGCTATTGAAGCTCGAAGAGGCTCATCCCAACCAGGTGACAGCAACTCCTCTCCGTCAGTTCATTATCAGCCACCAGGGAGTCCCACAGGTCATAGGACAGCCCCAGACTCTTCTAACCACTTCTCATGGGGGTACTCAGATCCTTCTTCCAATGCCCCTGGCAAATAATACCACTACCATCCAACTGCCCAACACTAATGTCAAACTACAGCAAGTTTTGCAGGCTGTCTCTCCATCAGTGCCAGGTATAATTCAGAACCCCCAAATACAGCCCACCAAAGCAGAGAGTCCTGCGTCACAACAGCTGCTCAGTCATAACCACATAGTTCAGACCCTGCCTGTGGGCGCCACAGAGAGGTCAGGCTTCCAGCACGTCACCAATGAGACCCCAGCAGGCCTGGAGATACCTCAGTGCTTCCTCAGCAACTCCCCAGATAACAGGATCTCACCTCAGACGTCCCCCATCCCATCATCCCTTATCAATGGGCCGCTAAACAAAACATCCTTCATTCAGCAGCCCCCAGTTTTCAACCAGACACCCAAGAACAGAGAGCCGCCTCGTTATGAGGAGGCCGTCAAACAGACACGCAGCCTACAGAATGCTGCTGTCTCAGAGATTCCCACAGCAACAAGTCAACAGATGGATGATctctttgacattttaatagaaAGTGGAGAGATCACTCCCTTTAGTCAACAGGACCCGTCTGTGCCTAGGATGATGCCTGTCACGGCCAGCATCACCACCCTGCCTATCAACACCGTCCTGTCCCGTCCACCCGCCCAGGTGCAGATGGCACCCCCGCCGGCGCTCATGGTGTCGCCCATGCCCAGCCTGGCCTCCCTGGACTCCGACAACCAGTTGGAGGCCCTGCTGGAGGGCACGCTGGTTGGGGACACCGAGCCGGAGCATAGGACTTTGGGCCTGCTGGAGGAGCTTCAAAACCAGATACTGGAGCAGCCAAACTCCCCAATGGACACTTCGGAGCTGAGCTTCACCGACCCGCCACCTTCCTCTTCCGCCCTGCCCTTTAGTCTCCAAGACACCGGCCTGGACAACATGGAGTGGCTGGACATCACTATGCCTGGGCCCATCGGCGGACTCAATCCATTGGGCATCACCTCTGAATTCCTGGACGCTCATGATCTGCAGCTGCACTGGGACTGACAGGAAACGCTTCAAACACGGTTATGCTTTCACTCGCACAACAAGCCGTCTGTCTCGGGGTCTGTGTGGCAGCGGTTCACGTCTGGCAGCTTTATGTGACTAGACTCCAGCTCAGCTGTACACTTCACTTACGCTGGTTCTAATCACCATCTGTTCTCATTCACCTTTTGATCAGAAAAGACACATGAGCCTTGTGGGTAATGCTAGCTAGGGCTCTCTTTGCTGTGCCATTCTGAGAGGGAGCTGCTTTCGGGCAGATTGAATTCTGCTGTATTgctattttgtttagtttttttcattcacGTGCCATTGACTTCAGATCGGTTCCAGTCAGGCTGTAAATATCCTCACAGCTAGTTTTAAGGAAGAGCTGTCGTTCCAAATGATGTGGCATCGCAGTAGAGTTCACTTTGTTTGctcaaaattgaaaattgagCCTTGAGCAATGACGCCGTTAGCGCTCCTGTCCGTGATCATGAGTGTCTGTGTCGAGGATGAGAATGTCAGACTCAACGTAGCAGTCAAGTGATGTTTCCCAGAATCCTCTTTTTCAGCACTGACTGCAGTAACAGCCTGGTGTCTGCAAGACTCAGTGGCAAgtgcactaccattcaaaagttttcacattGAGCGTAGTTTGGCAAAGATGGAATTATTCAATCAAAAGTGActtatataatgttacaaaagatggTTATATGTTTCTACTcatgctaaaatataatatacatgctaaattgccataaaaatattaagcagcacatttgtgaatgatcatgtgacactgaacgGCTGCTGGAagttcagcttttattttaaaatatattaaaattgaaaacggCTATTTTATATTGCAGAAatgtttcacagtttttatgttttactatatttttcaattacataaatatagcCTAGTGAGCACTTTCAAAAAGAAACTTAAATGGTTGTATAGTTCGATGAAGATCTAATTAACATATCCAATTTTTAGCAAATCTGCCTTTTTATGATATTGTTTGACTGGCTGTTGACCAGAAATATTGAGTTGTGTTTTATAAAGCGGCTACAATTGCAAATGTCCCGTAAACGTAGACGTCCAAGGTTGCAAAGAGCTTTTGGTCTGATTTGTATCTGGGAATTGCAGACATAGGctatactgtttgttttttggtccTGGAAACAGAAATTTTGTCATCAATCAGCTCTCAATTTCAGACACAAAGCATCCCATTTTGATCAACGGGAGATCAGTTCGTCTATACCATTTGGAAACGATCTAAAATGAATCTATAAAAAGATGTAAATAATCTACGAGGACAAATTTTTGtataaagaaaagcaaaaagaaaaactattttgtctGACTCGTTGGATGTGCGACCccttgtttttgtgtatgtgaaTCGTGAatcagtgtgtctgtgtgtgattgTTCGTCGCTTCAGTGGAATGTTGTGTTTGATTTTCGGTGCATCATACTGTAAGAAAgttccagttttttttcccacatatTTATCAGTTCGGTTCACGCAGTGGGTGCTATATTTCAAgttctcatttgcatatttttgatgctatcggaaaaaaaaaaaactgtcaagaGACCCTGCTTTTAGAAAGAGATTATGTAAATGAAGCCATCTGAAGTTACAGCTGACACTAAATAGTGATCTTAATCAACACAGGGCAACTGTTTATTCCTCCAGTAAATGGagttgaaaaatgcaaaaaaaaa
>XM_043253546.1
CTGTAACCCATGAGATGGGCGAACTGTCCCTGCACCCCAGCCAGAGGCTGCCCCCCCTCAACGAACGCAAAAATGTTCTCCAGCTGAGGCTACAGCAGAGACGTACCCGCGAGCAGCTCGTTGATCAGGGAATCATGCCACACTGAAAATTTCCTAAAGCACAAAATACGCAGCCGCCCAGAAAGGGCTGAGTTGGTCCGCATGCACATCTTACAAGAGACGGTGGCAGAGCCTTCTCTGCAGGCCACTCAGCTGAAATTGAAGAGAGCTCGATTGGCTGATGACCTGAATGAGAAGATTGCTCAACGCCCTGGCCCCATGGAGCTGGTGGAGAAGAACATCCTGCCTGTGGACTCCAGCGTCAAGGAAGCCATCATTGATGGTCAGATGCAGTACCCTAGAATTCTAGAGGAACCAGCCGATGAAGACAGTGGAGATGCGTTTTCACCTGAGCAGCCAGCCAGTCAGGAGTCCCAGGGTTCTGCAGCTTCTCCTGGGGAGGTCCGGGCCATTGAAGAGTCCTCACCATTGCCTAACAACTTCTTAAAGCACTTTCCTGCAGTGACCACCACCACAACAGATTTCCTCAAGCCTTTTTCCACCAATGAGCAATTAATTAGTCCTCCAGCACCCATGCCACAGCTAATCACCGTGGCCCCTGTGAAGTCTGGACCCACCCTTGTAAAGCAAAGTCAGCCTAAGTTACCTGGGGACAAGAGCCGCAGCAAGAAGAGTAAGGAGGCCAAGCCACGTgtgaaaaagttaaaatatcatCAGTACATTCCCCCAGACCAGAAACAAGAACTCAACCAAGCTCCGATGGACTCCTCATATGCTCGTTTACTACAACAACAGCAGCTATTTTTGCAGCTACAGATCCTGAgccaacaacaacagcagcactACAACTACCAGACAATCCTTCCTGCACCTCTCAAGCCTGTAATTGAAGGCCAAAACAGTGGTGCCACAGTGGCTATCAACAGCACTAGCAGCCTTCCTGCGTCCATTGTGGTGTCTCTGCCCACAGCGACACCTGTGCGGCCCAACAGCACCCTTTCCAACCGCAAGGCAGGCATACTACCTGCCAACCTAGAGGAGATGAAgGTGGCAGAGCTGAAAATGGAGTTAAAGTTACGTGGTCTTCCGGTGTCTGGAACAAAAACAGACCTAATTGAACGGCTTAAGCCTTTCCAAGAAAACACTGCACCCAGCTGCACAGGACCTAACACACAGTCCTGCAGCACACCTATGGAGGTGTCCAGCACCACTACAACCCTATCCCCCATCCAGCAGCCCTCTGAAAATCTAAGCTCCACTCCACCTGTGTCTCCTGGTTCTTCAGAGCTTCACAGCAAAGAAGAAGCATACATGGAGGGACAGGCAGAGGGCCAAAACCGAAGTTTAGTGACGGCAGCTCCTGTTCCTGAGGAACAAGACCGGAGACTACACGAAAAGGAGCGACAGATTGAGGAACTGCTGCGTAAATTGGAGCAGGAGCAGAAGCTGGTGGAGGAACTGAAGATGCAGCTAGAGGTGGAAAAAAGGTGTGGACAGGTTCCACCTGCAGAAAATAACAACGCTTCCAGTCCAGCCACTATGTTGACGTctgtcaaaacagaaaacactgtcCCTCCTAACTGCACACTGAGTCCACACACTACGCCAACGCTATTGAAGCTCGAAGAGGCTCATCCCAACCAGGTGACAGCAACTCCTCTCCGTCAGTTCATTATCAGCCACCAGGGAGTCCCACAGGTCATAGGACAGCCCCAGACTCTTCTAACCACTTCTCATGGGGGTACTCAGATCCTTCTTCCAATGCCCCTGGCAAATAATACCACTACCATCCAACTGCCCAACACTAATGTCAAACTACAGCAAGTTTTGCAGGCTGTCTCTCCATCAGTGCCAGGTATAATTCAGAACCCCCAAATACAGCCCACCAAAGCAGAGAGTCCTGCGTCACAACAGCTGCTCAGTCATAACCACATAGTTCAGACCCTGCCTGTGGGCGCCACAGAGAGGTCAGGCTTCCAGCACGTCACCAATGAGACCCCAGCAGGCCTGGAGATACCTCAGTGCTTCCTCAGCAACTCCCCAGATAACAGGATCTCACCTCAGACGTCCCCCATCCCATCATCCCTTATCAATGGGCCGCTAAACAAAACATCCTTCATTCAGCAGCCCCCAGTTTTCAACCAGACACCCAAGAACAGAGAGCCGCCTCGTTATGAGGAGGCCGTCAAACAGACACGCAGCCTACAGAATGCTGCTGTCTCAGAGATTCCCACAGCAACAAGTCAACAGATGGATGATctctttgacattttaatagaaAGTGGAGAGATCACTCCCTTTAGTCAACAGGACCCGTCTGTGCCTAGGATGATGCCTGTCACGGCCAGCATCACCACCCTGCCTATCAACACCGTCCTGTCCCGTCCACCCGCCCAGGTGCAGATGGCACCCCCGCCGGCGCTCATGGTGTCGCCCATGCCCAGCCTGGCCTCCCTGGACTCCGACAACCAGTTGGAGGCCCTGCTGGAGGGCACGCTGGTTGGGGACACCGAGCCGGAGCATAGGACTTTGGGCCTGCTGGAGGAGCTTCAAAACCAGATACTGGAGCAGCCAAACTCCCCAATGGACACTTCGGAGCTGAGCTTCACCGACCCGCCACCTTCCTCTTCCGCCCTGCCCTTTAGTCTCCAAGACACCGGCCTGGACAACATGGAGTGGCTGGACATCACTATGCCTGGGCCCATCGGCGGACTCAATCCATTGGGCATCACCTCTGAATTCCTGGACGCTCATGATCTGCAGCTGCACTGGGACTGACAGGAAACGCTTCAAACACGGTTATGCTTTCACTCGCACAACAAGCCGTCTGTCTCGGGGTCTGTGTGGCAGCGGTTCACGTCTGGCAGCTTTATGTGACTAGACTCCAGCTCAGCTGTACACTTCACTTACGCTGGTTCTAATCACCATCTGTTCTCATTCACCTTTTGATCAGAAAAGACACATGAGCCTTGTGGGTAATGCTAGCTAGGGCTCTCTTTGCTGTGCCATTCTGAGAGGGAGCTGCTTTCGGGCAGATTGAATTCTGCTGTATTgctattttgtttagtttttttcattcacGTGCCATTGACTTCAGATCGGTTCCAGTCAGGCTGTAAATATCCTCACAGCTAGTTTTAAGGAAGAGCTGTCGTTCCAAATGATGTGGCATCGCAGTAGAGTTCACTTTGTTTGctcaaaattgaaaattgagCCTTGAGCAATGACGCCGTTAGCGCTCCTGTCCGTGATCATGAGTGTCTGTGTCGAGGATGAGAATGTCAGACTCAACGTAGCAGTCAAGTGATGTTTCCCAGAATCCTCTTTTTCAGCACTGACTGCAGTAACAGCCTGGTGTCTGCAAGACTCAGTGGCAAgtgcactaccattcaaaagttttcacattGAGCGTAGTTTGGCAAAGATGGAATTATTCAATCAAAAGTGActtatataatgttacaaaagatggTTATATGTTTCTACTcatgctaaaatataatatacatgctaaattgccataaaaatattaagcagcacatttgtgaatgatcatgtgacactgaacgGCTGCTGGAagttcagcttttattttaaaatatattaaaattgaaaacggCTATTTTATATTGCAGAAatgtttcacagtttttatgttttactatatttttcaattacataaatatagcCTAGTGAGCACTTTCAAAAAGAAACTTAAATGGTTGTATAGTTCGATGAAGATCTAATTAACATATCCAATTTTTAGCAAATCTGCCTTTTTATGATATTGTTTGACTGGCTGTTGACCAGAAATATTGAGTTGTGTTTTATAAAGCGGCTACAATTGCAAATGTCCCGTAAACGTAGACGTCCAAGGTTGCAAAGAGCTTTTGGTCTGATTTGTATCTGGGAATTGCAGACATAGGctatactgtttgttttttggtccTGGAAACAGAAATTTTGTCATCAATCAGCTCTCAATTTCAGACACAAAGCATCCCATTTTGATCAACGGGAGATCAGTTCGTCTATACCATTTGGAAACGATCTAAAATGAATCTATAAAAAGATGTAAATAATCTACGAGGACAAATTTTTGtataaagaaaagcaaaaagaaaaactattttgtctGACTCGTTGGATGTGCGACCccttgtttttgtgtatgtgaaTCGTGAatcagtgtgtctgtgtgtgattgTTCGTCGCTTCAGTGGAATGTTGTGTTTGATTTTCGGTGCATCATACTGTAAGAAAgttccagttttttttcccacatatTTATCAGTTCGGTTCACGCAGTGGGTGCTATATTTCAAgttctcatttgcatatttttgatgctatcggaaaaaaaaaaaactgtcaagaGACCCTGCTTTTAGAAAGAGATTATGTAAATGAAGCCATCTGAAGTTACAGCTGACACTAAATAGTGATCTTAATCAACACAGGGCAACTGTTTATTCCTCCAGTAAATGGagttgaaaaatgcaaaaaaaaa

Function

NR:

description
MKL/myocardin-like protein 2

GO: NA

KEGG:

id description
K22525 MKL; MKL/myocardin-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253545.1 True 4991 mRNA 0.48 16 8303767 8325041
XM_043253546.1 False 4570 mRNA 0.48 14 8303767 8319095

Neighbor

gene id symbol gene type direction distance location
mgrn1a mgrn1a,LOC107734214,LOC107669220,LOC107584113,LOC107554032 coding downstream 25602 8267774 ~ 8278165 (-)
foxj1b foxj1b,LOC107584215,LOC107734171,LOC107669185,LOC107692083,LOC107731389,LOC107554021 coding downstream 37139 8263110 ~ 8266628 (-)
zgc:163057 zgc:163057,LOC107584216,LOC107734190,LOC107692104,LOC107669180,LOC107594186 coding downstream 98047 8203574 ~ 8205720 (-)
hbae5 LOC107734189,LOC107594227,LOC107692106,LOC107674601,LOC107596827 coding downstream 108551 8194223 ~ 8195216 (-)
arhgap17a arhgap17a,arhgap17,LOC107594184,LOC107731407,LOC107669196,LOC107584117,LOC107699879,LOC107734204 coding downstream 124660 8155233 ~ 8179107 (-)
ercc4 ercc4,LOC107734247,LOC107669240,LOC107692079 coding upstream 202 8325243 ~ 8331539 (-)
snx29 snx29,LOC107584181,LOC107734208,LOC107690065 coding upstream 92191 8417232 ~ 8511214 (-)
LOC122355801 LOC107584107,LOC107734172,LOC107690070,LOC107731391,LOC107554041 coding upstream 189672 8514713 ~ 8515183 (-)
rsl1d1 rsl1d1,LOC107584214,LOC107734245,LOC107554037,LOC107692074,LOC107682682 coding upstream 192137 8517178 ~ 8520053 (-)
LOC122355888 NA coding upstream 193194 8518235 ~ 8518365 (-)
G86576 NA non-coding downstream 13357 8290080 ~ 8290410 (-)
G86553 NA non-coding downstream 104643 8198918 ~ 8199124 (-)
G86505 LOC107692108,LOC107584217,LOC107734162,LOC107669195,LOC107731388 non-coding downstream 113482 8187641 ~ 8190285 (-)
G86513 NA non-coding downstream 149594 8148747 ~ 8154173 (-)
G86516 NA non-coding downstream 191054 8111193 ~ 8112713 (-)
G86606 NA non-coding upstream 14415 8339456 ~ 8339815 (-)
G86608 NA non-coding upstream 19295 8344336 ~ 8344609 (-)
G86775 NA non-coding upstream 210932 8535973 ~ 8538206 (-)
G86798 NA non-coding upstream 272353 8597394 ~ 8628972 (-)
G86807 NA non-coding upstream 298256 8623297 ~ 8626329 (-)
G86203 NA other downstream 914857 7388236 ~ 7388910 (-)
G86108 NA other downstream 1199549 7103880 ~ 7104218 (-)
G86049 LOC101886504,LOC101886427 other downstream 1632520 6670319 ~ 6671247 (-)
LOC122355418 pnmt,LOC107571312,LOC107676565 other downstream 2225699 6051168 ~ 6078068 (-)
G85930 LOC107711793,LOC107755027 other downstream 2291656 5990913 ~ 6012111 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other upstream 9363 8334404 ~ 8359992 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other upstream 186362 8511403 ~ 8513265 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other upstream 285511 8610552 ~ 8612445 (-)
plbd1b LOC107578697 other upstream 357402 8682443 ~ 8687548 (-)
trnar-ccu_66 NA other upstream 362457 8687498 ~ 8687570 (-)

Expression


Co-expression Network