ubald1a (ubald1a,ubald1,LOC107734217,LOC107669224,LOC107731421,LOC107554033)


Basic Information

Item Value
gene id ubald1a
gene name ubald1a,ubald1,LOC107734217,LOC107669224,LOC107731421,LOC107554033
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8279068 ~ 8288769 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253553.1
CTAcagtaaatatttgtgtttgctCAACCGGCTGTAATGGTGGACGATTGAAAGAGAAAAGCGGAGAGACTAAATCTCAAAAATCCAGTCCCGGGTAAAACACTATTGTTCGTGGCTCGGAAACAAACACCAGCGAATATGGATGAACTCAAACATCAAGTTATGATAAACCAGTTCGTCCTGACAGCTGGATGTGCCGCAGACCAAGCGAAACAGCTTTTGCAAGCGGCACATTGGCAGTTTGAGACAGCCCTTAGTGCCTTCTTTCAAGAGACGAATATCCCTTACGGTCACCATCATCAAATGATGTGTACCCCCGCCAACACGCCCGCGACGCCACCAAACTTCCCAGACGCCCTCACCATGTTCTCGCGACTCAAAGCCTCGGAAAGcttcaacagcagcagcagtccCAGCATGGCCACCTCGCCCCCTCCTCCTCCGGTCAGCTGGGGCATGACCCCACCCGTGCCCAGCCAGCAGGGCTTATGGACTCAGGGGCCTTCCCCCCAACAAGCCCACCCGCCCCCAGGCTGGCCCTCAGCCGTCAACCAGCAAGCGGCAACCGAACAGAAGGCCAGCGTCGCCATGGAGGCCGAGAGATGAGGGCCTGGACTACGCGGAGCGAGGGGTCAGGGGAGGGTCGTTTTTCACTCACCAGACATGGAGGGCGAGAGAGCTACACCAAGAATAACCAAGCAACATGGACATTTACAGAAGAGGAGCGAAAGCCAACACGAAGGTAATAAGAGAAGTAAAGAAACAAGCGCACATTGTATTACTAAGAGAGCGAGCAAGTGAAATTTACCAAGTTTTTTCTATAATAAAAGAGTAGTTTAACGTATATGGGACTATGATCATTGCGGCCGTGGATTATTTCTGGTATTTTCTGGATGGACGTTTAGCATCTAAGGCAGCAATTTTTctcacattttactttttattctttcatcTGGTGTTCTTTATGCAAGACGAGAGTTGACGTTGCATGTGGATTAGCGATCTGTTTTTGCGGTTTTTAACTAACTAGTATTCAATGCAAGCATTCATGTGTACAGTGTGTGAGACTTACACACTCAAACGTTGTGTATCGGACTTACATTTTCTCTCCCCGTTGGATAATGGGACTTTTTTCGTACCTCACTGGTCACCTGACTCTACTCAACCAATCAGGGAATCTCACTAGTTGAACACATTTTTTCAAACTCGAACCGGATTTTCCATGATGCTTTGCTTTGTCCATTACGCGAGTAACTTACCGATGTCCTCAAAGATTGTAAAGATGATTCTGAAAGATCTGGATATTTTCTAATCGTGGCTCCTAGTTTTTCTGGTCAGCTGGTTTATCAGACTGTTGTTTCTTAGCTGAGGAGAGTAAACCCATGCCGCTAAAGCTACATTAAACCAGACTACTATACAACATGTTTGTAAGCAGACTTGCCACTTTGCATGACCTATTCATATGTATATCATATTTTGTAGTTTCTTGCTTTTTGGGGGAATTCTACATGAATGCTTTTCGGGAATTCTTTCTCACTTCTAGTTTTAGAGAGAGgattaaaaattctaattcaagTTGTATTTCTGGCCCAGTCTGATCTTTCTATtgaaataaaagtgataaaGCTGGTggggattatttttttttttttcgtttgatgaattcaacttttaaaaagcaatgcTGTCAGTAATTTTAAGGTTTACTTTGTGTTACTTTCCATTCGCTACAATTTCTGATCAAGCTTTTCTTTTGGGGTCACTTGTTCCCAAATGGTTTTCCATGTATGTTTTCCCCTGTTTGACTGTATTGATACCATTCCCACAATATTTGTGGACTACCTGATAATTAACTTATCATTGTTTGTGTtcctaaataaatattgtatgtcCTA

Function

symbol description
ubald1a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human UBALD1 (UBA like domain containing 1).
ubald1 Orthologous to human UBALD1 (UBA like domain containing 1).

NR:

description
PREDICTED: UBA-like domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253553.1 True 1895 mRNA 0.44 3 8279068 8288769

Neighbor

gene id symbol gene type direction distance location
rhbdf1b LOC107734220,LOC107731426,LOC107584114,LOC107692086,LOC107669219,LOC107594190 coding upstream 35811 8215566 ~ 8243257 (+)
hbbe3 hbbe3,LOC107734188,LOC107669171 coding upstream 76316 8201945 ~ 8202752 (+)
aqp8a.2 aqp8a.2,aqp8,LOC107734187,LOC107692107,LOC107594226,LOC107669187,LOC107731382 coding upstream 85705 8191318 ~ 8193363 (+)
aqp8a.1 LOC107584217,LOC107734162,LOC107669195,LOC107692108,LOC107731388,LOC107594225 coding upstream 88788 8187553 ~ 8190280 (+)
lcmt1 lcmt1,LOC107734249,LOC107584116,LOC107669194,LOC107731431,LOC107594185 coding upstream 93094 8180004 ~ 8185974 (+)
LOC122355370 NA coding downstream 3967 8292736 ~ 8303541 (+)
shisa9a shisa9a,LOC107584108,LOC107734251,LOC107669237,LOC107554036,LOC107692077,LOC107731434 coding downstream 72416 8361185 ~ 8388328 (+)
maff maff,LOC107690056,LOC107584105,LOC107692071,LOC107554043,LOC107731405,LOC107734233 coding downstream 247217 8535986 ~ 8541171 (+)
si:ch211-141o9.10 si:ch211-141o9.10,LOC107690061,LOC107584211,LOC107734185,LOC107584178,LOC108431982,LOC107089545 coding downstream 280009 8568778 ~ 8573399 (+)
cdc42ep1a LOC107584101,LOC107690062,LOC107734237,LOC107692066,LOC107554048,LOC107731423 coding downstream 294749 8583518 ~ 8592029 (+)
LOC122355856 NA non-coding upstream 72320 8204145 ~ 8206748 (+)
G86536 NA non-coding upstream 74925 8203583 ~ 8204143 (+)
G86540 NA non-coding upstream 80658 8198094 ~ 8198410 (+)
G86460 NA non-coding upstream 218892 8056931 ~ 8060176 (+)
G86374 NA non-coding upstream 432206 7846558 ~ 7846862 (+)
G86577 NA non-coding downstream 3074 8291843 ~ 8292062 (+)
G86593 NA non-coding downstream 55900 8344669 ~ 8344968 (+)
G86713 LOC107578697 non-coding downstream 393620 8682389 ~ 8686117 (+)
G86756 NA non-coding downstream 584558 8873327 ~ 8873545 (+)
G86758 NA non-coding downstream 586346 8875115 ~ 8875455 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other upstream 81164 8195964 ~ 8197904 (+)
msrb1b msrb1b,LOC100705913 other upstream 172288 8105148 ~ 8106780 (+)
LOC122355675 NA other upstream 434985 7815823 ~ 7844083 (+)
G86143 NA other upstream 970839 7307924 ~ 7308229 (+)
G86142 NA other upstream 974220 7303138 ~ 7304848 (+)
arsg arsg,LOC107734203,LOC107660857,LOC107692046,LOC107554066 other downstream 547679 8836448 ~ 8852449 (+)
pkd1b LOC107723630,LOC107665861,LOC107556563 other downstream 996894 9285663 ~ 9306831 (+)
mfsd8 mfsd8,LOC107738985,LOC107556570 other downstream 1367900 9656669 ~ 9664139 (+)
LOC122355274 shisa9a,LOC107584108,LOC107734251,LOC107669237,LOC107554036,LOC107731434,LOC107692077 other downstream 1468478 9757247 ~ 9767228 (+)
LOC122355252 fam20cl,LOC107741571,LOC107664989,LOC107570372,LOC108436593,LOC102782963,LOC108259419 other downstream 1576045 9864814 ~ 9874515 (+)

Expression


Co-expression Network