glud1b (glud1b,LOC107739271,LOC107700126,LOC107698813,LOC107550058,LOC107749346,LOC108430434)


Basic Information

Item Value
gene id glud1b
gene name glud1b,LOC107739271,LOC107700126,LOC107698813,LOC107550058,LOC107749346,LOC108430434
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 11306072 ~ 11320705 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253593.1
AGCGCGAGACGGCATGAGCGCTGTCACTTTGACACTGAACGAGGCAGGCTCGGGAGCTTCCGTAGTCTCGTTCATTTACCCCCCTTTTCGTTTCCCTTTTTCACCTCGTCGAATACCCATCATCCATTAATTTCATCTTTCTCCATTGTACTGTAACTTCCAAAGCCCCTTGTCGCCATGTACCGGTATTTCGGGGAGCTGCTGACTCGCGGAGCTGGAAATGCTCTGGCCTCGGGATGCGTCGAGTCTGCTCTGCCGGCTTCCTCGTCTCTGCTGAGGGTGCGTCACTACAGCGATGCCGCTGACAAGGAAGATGACCCGAACTTCTTCAGGATGGTGGAGGGCTTCTTCGACCGCGGCGCTGCTATTGTGGAAAACAAGCTGGTTGAGGACCTGAAGACCCGGGAGACGCCGGAGCAGAAGAGGCACCGTGTGCGGGGGATCCTCAGGATCATCAAGCCCTGCAACCACGTCCTGAGCGTGTCCTTTCCCATAAAGAGAGACAACGGAGAATGGGAGGTTATCGAGGGTTACCGGGCGCAACACAGCCAGCACAGAACTCCTTGCAAAGGAGGTATCCGATACAGCATGGATGTGTCAGTGGATGAGGTTAAAGCTTTGGCCTCCTTGATGACGTACAAGTGTGCTGTTGTGGATGTGCCATTTGGTGGAGCTAAAGCTGGAGTGAAAATCAACCCCAGGAATTACTCTGATAACGAGTTGGAGAAAATCACAAGAAGATTCACCATTGAGCTGGCCAAAAAGGGATTCATTGGACCTGGCATTGATGTACCTGCCCCTGACATGAGCACCGGTGAGAGGGAAATGTCCTGGATCGCTGACACTTACGCTAACACTATTGCCCACACTGATATCAATGCCCACGCCTGTGTGACGGGTAAACCTATTAGTCAGGGGGGTATCCATGGCAGAATCTCAGCCACTGGGCGTGGAGTATTCCATGGCATAGAGAATTTCATCAATGAAGCCTCCTACATGAGCAAACTGGGCCTGACACCTGGATTTGCTGATAAAACCTTTATTATTCAGGGTTTCGGTAATGTGGGTCTGCATTCCATGCGTTACCTCCACCGTTATGGTGCCAAGTGTGTGGGAATTGCTGAAATCGATGGCAGCATCTGGAACCCCAACGGCATGGACCCCAAAGAGCTGGAGGACTACAAACTGCAACATGGCACCATTGTGGGCTTCCCTAACTCTCAACCATATGAGGGGAACATTCTGGAAGCTCAGTGTGACATCCTCATCCCTGCAGCTGGAGAGAAACAGCTGACCAGGAAGAATGCCCACAATATCAAAGCCAAGATTATTGCTGAAGGCGCTAATGGTCCGACTACACCAGATGCCGACAAGATCTTCTTAGAAAGGAACATCATGGTCATTCCAGACATGTACCTGAACGCTGGAGGTGTCACAGTCTCTTACTTTGAGTGGCTGAAGAACCTGAACCACGTCAGCTACGGTCGTCTGACCTTCAAGTACGAGAGAGACTCCAACTACCACCTGCTGATGTCTGTACAAGAAAGTCTTGAAAGGAAGTTTGGAAAGCAGGGTGGCCCAATCCCAATTGTCCCCACTGCTGATTTCCAGGCTCGTGTAGCTGGTGCCTCAGAAAAGGACATCGTGCACTCTGGTCTTGCCTACACCATGGAGAGGTCGGCCAGGCAAATTATGCGCACCGCAAACAAGTACAACCTTGGCTTGGATTTGAGGACGGCGGCTTACGTCAACGCCATCGAGAAGGTCTTCAAGGTGTACAATGAGGCCGGCCTGACCTTTACATAAACGACCCAAACAAAAAGAAGACGAAACCGTCCATCCGACCTCTTGATTCCCCTTCACGACCTTTTTAACCTATCAGAGTTTACATCAGCCTAACCCTCTATTAAAACGCCCTCATGCTGTCATACCCCAGAATCTCCATCCACATGAGTTTGAGAAATATAAAGCGGTTTAATCTGTTTTGAGGCTACAGTTTTTACTGCTTTGCTGTAGTGATGGCGCCAATCATCAGGTTTCTCAAGTGTGTCTTGTTGTAACTTGTTCATTTCgtccttaattttttttttttattgctctgTGGTAAACTAACGTGGTCCTCTTCAGATGCAGCTGTAGCACACCGTTTTAAATGTCTGTCGATTTGTCACGTTGACCCTGGATTCCTCTCGCCATGAAATATTAGTTCAGCTTGGTGCGTTTACGTCGTGATAggttttatttcctttatttcgTATTGTCATTTACACATGGTCATTGCTACAGTAATGAAGAGCGTTAAAGATGCCTTACACCCGTGAGCAGGAGTTTTATATAGAGCAATTCTTTTCTGTCACTATAGTCCATGTAGTGCATCACACAAAGGGAAACCCAGCCATGATTTGCatcatgtaaatgttttgacCTAGAGGTGCAATGAAGTTCTAGCTGACAATGTGCAGTACATTTAGGTacggatgttttttttgtttccgaGGCGGTTCAGACCACGTAACGTTTGGAGATCTGGTAGTTTGTTAAACCTAGATGACTCGAGACAGTCGCGCTTAAATGAGAGCTGGAAGTTGCTATATCtggaatgtttttgaaatttaTATTGCCTTTTTgttgagaataaaacaaattatcataatttattttatgttgtattttttttttctctcagcgTCACCAAAATACCACGTGTATCACATTCGGCTAAATAAAAAATCCCTGTAAATCA

Function

symbol description
glud1b Predicted to enable glutamate dehydrogenase (NAD+) activity. Predicted to be involved in glutamate catabolic process. Predicted to act upstream of or within cellular amino acid metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including blastomere; digestive system; fin; mesoderm; and tail bud. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; hypoglycemia; and late onset Parkinson's disease. Orthologous to several human genes including GLUD1 (glutamate dehydrogenase 1).

NR:

description
PREDICTED: glutamate dehydrogenase, mitochondrial

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0006520 cellular amino acid metabolic process biological_process
GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor molecular_function

KEGG:

id description
K00261 GLUD1_2, gdhA; glutamate dehydrogenase (NAD(P)+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253593.1 True 2743 mRNA 0.47 13 11306072 11320705

Neighbor

gene id symbol gene type direction distance location
epas1a LOC107698815,LOC107550055,LOC107739260,LOC107700124,LOC107582769 coding upstream 7567 11278272 ~ 11298505 (+)
prkcea prkcea,LOC107550054,LOC107698816,LOC107739250,LOC108274197,LOC108430457 coding upstream 28581 11230187 ~ 11277491 (+)
six3b six3b,LOC107550037,LOC107698799,LOC107582771,LOC107739239,LOC107749382,LOC107700110 coding upstream 93307 11210251 ~ 11212765 (+)
ppm1bb ppm1bb,LOC107582773,LOC107698817,LOC107749348,LOC107550052,LOC107700122,LOC108430462,LOC108273990,LOC107739221 coding upstream 141030 11141624 ~ 11165042 (+)
mta3 LOC107698822,LOC107582777,LOC107728718,LOC107700107,LOC108430512 coding upstream 223796 11055694 ~ 11082276 (+)
mmrn2b LOC107749343,LOC107698811,LOC107550061,LOC107700129,LOC107582854 coding downstream 15076 11335781 ~ 11344597 (+)
itgb3b itgb3,itgb3b,LOC107698806,LOC107700113,LOC107706862 coding downstream 232406 11553111 ~ 11568617 (+)
ndel1a ndel1a,LOC107706877,LOC107698805,LOC107700135,LOC107552751,LOC107727307,LOC107582761 coding downstream 248795 11569500 ~ 11578830 (+)
armc7 armc7,LOC107706878,LOC107706863 coding downstream 259871 11580576 ~ 11581865 (+)
chad LOC107552753,LOC107727306,LOC107706882,LOC107698804,LOC107675646,LOC107582760 coding downstream 265345 11586050 ~ 11594542 (+)
G87238 NA non-coding upstream 78157 11224765 ~ 11227915 (+)
LOC122355611 NA non-coding upstream 175182 11122923 ~ 11130890 (+)
LOC122355479 NA non-coding upstream 216914 11083398 ~ 11089158 (+)
G87220 LOC107749353,LOC107550036,LOC107698821,LOC107700109,LOC107728709,LOC107582776 non-coding upstream 217015 11082200 ~ 11089057 (+)
G87241 ldb3,LOC107743565,LOC107696891 non-coding downstream 56408 11377113 ~ 11392372 (+)
G87272 NA non-coding downstream 117700 11438405 ~ 11515996 (+)
G87282 LOC107552728,LOC107706876,LOC107700134,LOC107698791,LOC107582764,LOC107727319 non-coding downstream 153141 11473846 ~ 11541104 (+)
G87285 NA non-coding downstream 163488 11484193 ~ 11496992 (+)
G87331 NA non-coding downstream 421276 11741981 ~ 11744405 (+)
svila LOC107686370,LOC107657481,LOC107584371,LOC107749370,LOC107549408 other upstream 723527 10523143 ~ 10582545 (+)
LOC122355633 rhoq other upstream 806374 10497425 ~ 10499698 (+)
LOC122355192 opn4b,LOC107552747,LOC107739286,LOC107568552,LOC107582762,LOC107700131 other upstream 809795 10481492 ~ 10496277 (+)
LOC122355255 NA other upstream 1407071 9883033 ~ 9899001 (+)
LOC122355252 fam20cl,LOC107741571,LOC107664989,LOC107570372,LOC108436593,LOC102782963,LOC108259419 other upstream 1431557 9864814 ~ 9874515 (+)
G87315 zeb1b,LOC107666916,LOC107706887,LOC107727309,LOC107582755,LOC107552760,LOC107669492 other downstream 374139 11694844 ~ 11701655 (+)
hoxb6b hoxb6b,LOC107669478,LOC107706870,LOC107582852,LOC107552740,LOC107666911,LOC107727299 other downstream 561446 11882151 ~ 11884097 (+)
nbr1a nbr1,LOC107669491,LOC107706899,LOC107582742,LOC107727312,LOC107666919 other downstream 616136 11936841 ~ 11945635 (+)
G87817 NA other downstream 1412059 12732764 ~ 12737649 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other downstream 1439669 12760374 ~ 12762731 (+)

Expression


Co-expression Network