syt15 (syt15,LOC107749849,LOC107601428,LOC107690928,LOC107684091,LOC107755468)


Basic Information

Item Value
gene id syt15
gene name syt15,LOC107749849,LOC107601428,LOC107690928,LOC107684091,LOC107755468
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 15401427 ~ 15407306 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253830.1
GACATCAGGAAGAGCGCCCATGAGACGGCCTCTGGGCAAAATGAGAAACCAGTGATTGGTGATTCACACGGACTCtactggagagaaagagagactttATTCAGTTAGGAGTTAGACAGACCGTGGCCATCCATGGCTGATCCACTTGTAGCACTGGCTTGTGGACTGTCTGCAGCATTTCTGTTCCTGTTGCTGTTTGGCCTATCAGTGTATCTACTGTGGAGGAAGAGACGAACTCAAATGCTCTACAGGGGACTGATACCTACCACCCCCACAATCCCACGATGCACCACTCCAGTGCTTCAGACACAGAGCAGCAGCTATGGCTCAGGTGGTGTTCCTTTCTTTGTGCCTCCTCGATTCAAGAAAGCACCCAATCTAAAAGAGgggaaagaagaaagagagcaTGCTGAGGAATGGGAACTCCATCCAGATCTGCACACCCAGCGAGGCTCTCTGACAGTACGGAGTTGGTTCCCTCTGGGCAGCATAAGACCAGACCTGTACCAGCTCCCAGAGGAGCCCAGTGAATGGACTCTTCCCAATGGCTCAGCCGTTCGCCTGTGGTTCGCTCTGCGGTATCAGCAGGAGAGAGAGCAGCTGGTGGTGTCTCTGCTCCGTGCTGCTAACCTGCCCGCTCAGTGCCAGGGTAATGTCACGCTGGTAAAACTGCAGCTGTTACCTTCCGATGAACGACGATACCGTCAAGCCAAAGCACGACGGAAAGGTTGTCATCCGCAGTTCAACGACACCTTTGTGTTTCAGGTATCTAATAGCTGTGTCGACCAATGCTCTCTGACCATGAGCATGTACCATGTGGACCATCAGAAGAAGCACCGTCTTGTAGGCCAAGTCCTGATCCCACTCAGATATTCTGAACTGAAGGAGACGGCAGGCAAAGTGCAATGGAGGGATCTGGACAGTGAAAGTGATCAACCCATTTCAAAAAATGGTGACATCCAGGTGTCTTTGAACTACAATCAGTCCCTGCACCGCCTCACTGTGGTTGTTTTACGAGCGCGAGGGTTACAGTGTTGCAGCGATGCAGGTGTGTGCGCTCAGGTCTCTTTGAAGATACATACTCAGGTGGTGAGGAACAAGTGGACCGCTGTAGCGAAAGGAAATAATCCATCCTTTAATGAGAGGCTTACCTTCAGACTCCTCCCCATGCAGCTGGACACGGCCTGTCTGACCCTACAGCTCCAGCAGCCCAGCACAGAGGAGCCCGTGTTGTTGGGCATTGTGGTCATAGGGCCGTTCATGTACGCGAGGGGCAGAGAGCTGGAACACTGGAACGACATGGTCAGCAAACCACAGGAGCTGGTCAGGCAATGGCACCCGCTGGGATCCGCTGACACAGTACAGGGCCCTCAATGAACAACATGCTACAAA

Function

symbol description
syt15 Predicted to enable several functions, including SNARE binding activity; calcium ion binding activity; and phospholipid binding activity. Predicted to be involved in calcium-ion regulated exocytosis; cellular response to calcium ion; and regulation of secretion by cell. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in exocytic vesicle and plasma membrane. Orthologous to human SYT15 (synaptotagmin 15).

NR:

description
synaptotagmin-15-like

GO: NA

KEGG:

id description
K19914 SYT15; synaptotagmin-15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253830.1 True 1392 mRNA 0.53 8 15401427 15407306

Neighbor

gene id symbol gene type direction distance location
timm23a timm23a,LOC107690962,LOC107684090,LOC107749852,LOC107561858,LOC108426535 coding upstream 11972 15384777 ~ 15389455 (+)
prph2a prph2,prph2a,LOC107601435,LOC107581607,LOC107684088 coding upstream 74396 15322269 ~ 15327031 (+)
tbcc LOC107755474,LOC107690923,LOC107601434,LOC107684155,LOC107749866,LOC107581680 coding upstream 79675 15320498 ~ 15321752 (+)
tepsin tepsin,enthd2,LOC107755426,LOC107749856,LOC107601406 coding upstream 98807 15295473 ~ 15302620 (+)
slc38a10 slc38a10,LOC107690917 coding upstream 108747 15267428 ~ 15292680 (+)
si:ch73-127m5.1 si:ch73-127m5.1,LOC107690930,LOC107755465,LOC107749846,LOC107684096,LOC108410513,LOC108273477 coding downstream 13346 15420652 ~ 15450597 (+)
LOC122355686 ndst2b,LOC107755463,LOC107684097,LOC107749844,LOC107690932,LOC108410510 coding downstream 44331 15451637 ~ 15511996 (+)
chmp6b chmp6b,LOC107749864,LOC107684156,LOC107755461,LOC107690936,LOC108429718 coding downstream 463851 15871157 ~ 15873970 (+)
btbd17a btbd17a,LOC107755452,LOC107597820,LOC107690956,LOC107753244,LOC107684110 coding downstream 699752 16107058 ~ 16114050 (+)
map2k6 LOC107684112,LOC107753245,LOC107597823 coding downstream 718608 16125914 ~ 16135698 (+)
G88509 NA non-coding upstream 161063 15239969 ~ 15240364 (+)
G88455 NA non-coding upstream 474014 14921169 ~ 14927413 (+)
LOC122355815 NA non-coding upstream 482388 14917762 ~ 14919039 (+)
G88296 NA non-coding upstream 617489 14780915 ~ 14783938 (+)
LOC122355796 NA non-coding upstream 1134398 14245352 ~ 14267029 (+)
G88543 NA non-coding downstream 107965 15515271 ~ 15778531 (+)
G88546 ankfn1,LOC107581638,LOC107684130,LOC107702427 non-coding downstream 141924 15549230 ~ 15571632 (+)
G88548 NA non-coding downstream 169661 15576967 ~ 15645470 (+)
G88550 LOC107566773,LOC107702427,LOC107581638,LOC107684130 non-coding downstream 178808 15586114 ~ 15647353 (+)
G88551 ankfn1,LOC107702427,LOC107684130,LOC107566773 non-coding downstream 194989 15602295 ~ 15604006 (+)
qki2 qki2,LOC108426533,LOC107755469,LOC107690925,LOC107601430,LOC103029551 other upstream 23326 15346545 ~ 15378101 (+)
si:dkey-21c1.4 LOC107755475,LOC107576597,LOC107690918 other upstream 89423 15307426 ~ 15312004 (+)
sfxn2 sfxn2,timp2a,LOC107755483,LOC107722238,LOC107581595,LOC107690949,LOC107565802,LOC107755484,LOC107684079,LOC103024286 other upstream 461236 14930079 ~ 14940191 (+)
stxbp4 stxbp4,LOC107702473,LOC107581670 other upstream 1269642 14105956 ~ 14131785 (+)
rnf157 rnf157,si:dkey-49c17.3,LOC107702467,LOC107755520,LOC107684047,LOC107722211 other upstream 1408383 13978171 ~ 13993044 (+)
LOC122355837 ndst2b,LOC107601424,LOC107755463,LOC107690932,LOC107749844,LOC107684097,LOC107561853,LOC108410510 other downstream 44188 15451494 ~ 15774014 (+)
baiap2b baiap2b,LOC107684102,LOC107749842,LOC107690938,LOC107755398,LOC108273716 other downstream 425978 15833284 ~ 15928026 (+)
LOC122355667 LOC107704244,LOC107753270,LOC107684139,LOC107561814,LOC107755395 other downstream 828629 16235935 ~ 16239783 (+)
si:ch211-250n8.1 si:ch211-250n8.1,LOC107704243,LOC107753284,LOC107755421,LOC107597839,LOC107684159 other downstream 835563 16242869 ~ 16249690 (+)
fbxw10 LOC107704232,LOC107755393,LOC107580469 other downstream 867370 16274676 ~ 16282229 (+)

Expression


Co-expression Network