LOC122355472


Basic Information

Item Value
gene id LOC122355472
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13293736 ~ 13296254 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253840.1
AGAGAGGGTACTGAAGGAAAATAATCTTTTTAGTCTTATTAAAAACAGGAGTGGCTTTTTAAACTACTGTCATCACTTCATTTAGGGCTTTCTGTCTTTATTAAAATCAGTAGAAGTCAACCAttggaaaaattatttaattaaattgtttgatcaaatcaatttaatttaaactccATTAATTCAGAAGTACATTGGAACTTTTTAGTGCTGATCATTTAGCACTACTATTTTGAAGTCTGTGGCCTCTATGCtattttagtgtgtttctaTTTTCAGTCCAGCAAGTTGCTGTGAGGCTGCAGTGTGTGCACACTTCTGTTTACAAGTCAAATCCAAACAGAAACACTAACTGACTAGACGTCTATCTTTATGGTTCATGAAGAGAGTAATCTGGGTACGAACAGGAAGGAGAGAGGTGTTATGGGGCCCCCTAGCAGTTTGGGTCAAAGCAGAGACGAAAGAGAAGAACAAGTCGAAGAGTCCTCTGGAATTCTTAGAGTACGTGTTGAAGAGAGTGTTTTTACCATAGACAGGGCTGTCCTGGGACAGAACTGTGAGTATTTCCGTGCTCTCTTCCGCTCTGGGATGAAGGACAGTCATCTGAATGAGTTTCACCTGCAGGGAGGCTTAAAAGCCAGGGGTTTCCTCATCGCCATGGCAGTTTCCAGAGGTGAGTGCCCTGCTATAAGAGACCCAGACGAGATCGTGGAGGCTGCCGAGTGTGCGGCCTTCCTCCAAATCGACGTCCTGGTCCAGCACTTGATAGACATTCTTGATACCGACAACTGCATTCTTCTGTATCACACAGCAGCGGTGTACGGCTTGTGGAGGTTGTTTCAGAGTGCTGCAGTGTTCATTCGTGATGCTTACAGCGATGTGCAAGATGCTCTCGAGGCACTTCCAGAAGAGCTGTTCTGCTACGTTGAGTCACTTTCACCAGCGTCTTTTGTTGCTCTAGGAACTCATTCACCGTCTATGAAGATTCTGCAGGACTGCTACAGGACGGTGTTTTACCTTGATGAGAAACTGGGAGCTTGGAAATATCTGACTGACTTACCGACAGACGCCAGCACCTCTATGGCCGGGGTGGCTGTTGTGGAGAACCGACTGTATATCGTTGGAGGAGTTCGAGGAGTTAGCAAGGAAACTGTTGACTTGAGCTTCTGCTATGATGCAGATTCCAACACTTGGAGTCTGTTTGATGGTCCTCAGCAGTCTAGATATAACTTCACCCTTGTGGGTCATGACGGACATTTGTATGCCATCGGAGGTGAATTTGACAAAAGGATTATGTCCTCGATGGAAGTGTGTGATGTTTCTACAGGCGCGTGGACATTTTGCAAGCACGCGCCTCGTTCGGTGGCTGGGGCAGCTAGTGCAGTTGCCAGGCGTAGgatatttgtgtgtttctggAAGCCACCGGATACTACTGATATTTATGAATATGCACCTAAAAATGACGTATGGATGCTGGTTACAACTATGGTCAAGCCTCAGAGTTACGGACACTGTATGGTGGCTCACGGTGACAACCTGTATCTCATGAGGAACGGCCCCTGTGATGACTTCTTACGCTGTCTCATGGATTGCTACAACATCACTACGGGTCAATGGACTGCCATGCCAGGACACTACGTCAATAGCAGGGGTGCCCTCTTCACGGCTATGGTAAGGGGGAACTCTGCATTCACTGTCAACCGCAATTTGACCCTGGAATATGTCATTTGTGGTGATACCTGGAAGCCTCGTAGACAGATGACAGGTTTTCCAAAAAGTGGCTCGCTTTGGACTTGCTTACTCAGACTGCCTAAGATCACAGATGCACAGCAGAAATGTGATGCAGAGGAAGCCCTGGTGATGGACCCCAATGTGGAAAGTGTGGAAGAAAATTCAGTAGAGGCTAATTATCCACTTTAGGGATTGCAGATCAATCTGTTATTTTATAAGTTAAGGTTGCtccaacccaaaatgaaaattttatcactaatcatgttgttccaaacctgtaaaagctttgttctcaGAACAgaattgaagatattttggatgaaaaccagaaGGCTTATGACTTTCAAGTAAATaacacatatatgcataacaGTCCAaaaatactccatctgccatcagtggttcaatctgaattttCCGAAGTGATGGGAATACATTTtgtacacaaagaaaagaaaaataacatcaaCATTTTGTCTACTCTGTGTCTCTCTGCCACAtcgtagcaccattttggagagtatccgcTGGAAGCAAACTGCGTATGCTCTTTTGTGTCAGCTGTTTTCATTCAagtgtaaatatacatacaaaacatacCTTATTTTGCGGCTGGCACAGAAGAGCATACATTATTTGCTTAGCTGTCATTGggacagtcaaaaaaaaatatcttaaaatggagcttttatgggtttggaacaacttgtgggtaagtgattaatgagaaaaaattGTAATGTTGTGATGGGAGTGGAgtaaccttttaaataaacagtattacaaag

Function

GO:

id name namespace
GO:0005516 calmodulin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253840.1 True 2519 mRNA 0.43 1 13293736 13296254

Neighbor

gene id symbol gene type direction distance location
trub1 trub1,LOC107755443,LOC107689966,LOC107702428,LOC107708440 coding downstream 90866 13199764 ~ 13202870 (-)
atrnl1b atrnl1b,atrnl1,LOC107755548,LOC107689951,LOC107708169,LOC107702414 coding downstream 96651 13113810 ~ 13197085 (-)
nrg3b nrg3b,LOC107678479,LOC107566665,LOC107689960,LOC107563798,LOC107754077 coding downstream 274033 12900935 ~ 13019703 (-)
sh2d4bb LOC107754115,LOC107565991,LOC107675008,LOC107689965,LOC108273974,LOC107722446 coding downstream 407572 12879600 ~ 12886164 (-)
si:ch211-214e3.5 LOC107754079,LOC107565766,LOC107675030,LOC107722448,LOC107689947,LOC107563792 coding downstream 438441 12846514 ~ 12855295 (-)
vwa2 vwa2,LOC107755546,LOC107702446,LOC107707947 coding upstream 11367 13307621 ~ 13324695 (-)
tdrd1 LOC107702448,LOC107755540,LOC107566104,LOC107581549,LOC107708149,LOC107689961 coding upstream 28899 13325153 ~ 13334792 (-)
adrb1 adrb1,LOC107755541,LOC107566002,LOC107702449,LOC107689959,LOC107581665 coding upstream 76235 13372489 ~ 13375488 (-)
nhlrc2 nhlrc2,LOC107755539,LOC107708141,LOC107702418,LOC107684116 coding upstream 85390 13381644 ~ 13398387 (-)
plekhs1.1 LOC107566815,LOC107755416,LOC107702419 coding upstream 109539 13405793 ~ 13410281 (-)
G87860 gabrz,LOC108273489,LOC107675029,LOC107754081,LOC107565977 non-coding downstream 486090 12804696 ~ 12807646 (-)
LOC122355629 NA non-coding downstream 655000 12613150 ~ 12638736 (-)
G87746 NA non-coding downstream 806341 12438750 ~ 12487395 (-)
G87695 LOC107669482,LOC107552775 non-coding downstream 946670 12344898 ~ 12347066 (-)
G87660 NA non-coding downstream 1140999 12152240 ~ 12152737 (-)
G88003 NA non-coding upstream 69699 13365953 ~ 13368320 (-)
G88019 NA non-coding upstream 137640 13433894 ~ 13434125 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding upstream 162202 13458456 ~ 13459865 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding upstream 163891 13460145 ~ 13461245 (-)
LOC122355666 NA non-coding upstream 412801 13709055 ~ 13712541 (-)
G87845 LOC107675011 other downstream 541058 12751904 ~ 12752678 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other downstream 618264 12649383 ~ 12675472 (-)
G87608 NA other downstream 1342581 11948540 ~ 11951155 (-)
G87569 NA other downstream 1458124 11832879 ~ 11835612 (-)
G87489 NA other downstream 1971133 11321423 ~ 11322603 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 128054 13424308 ~ 13432195 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 227414 13523668 ~ 13540301 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other upstream 313166 13609420 ~ 13691340 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other upstream 676628 13972882 ~ 13976511 (-)
G88250 LOC107702476 other upstream 851793 14148047 ~ 14150005 (-)

Expression


Co-expression Network