slc16a12b (slc16a12b,LOC107753457,LOC107669179,LOC107584144,LOC107758438,LOC108413683)


Basic Information

Item Value
gene id slc16a12b
gene name slc16a12b,LOC107753457,LOC107669179,LOC107584144,LOC107758438,LOC108413683
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7597840 ~ 7604554 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253973.1
CCTGCCATGCATACTtgcataatttttcttttcacgTGTAGGGGGAGTGGAGTCAGAGGTAAATAGGTTCATAGCTCGCACGTCTAAACATGTCGATGTAGCCTGGTCTTGATGTTCCGACAGCTGCAAACTTGTTCGCTCGGTGGAAGCCGCAGGATGTTGATGAACATCCTGCACCGGCTCAATTAAACGAATGTGCAGAAGAGTTTCAAACGTCCGGAGCAGCTCGCGCGATTGCGGAGGAGTCGAATGGGGAACGTTTGGACCCGTGTTTACGGTAGTTTTATAAAATGCAGAGTCACTGACCGGGCCTCACATCTGCAGAAGGAATTCCATGACCGGTGTTAGTGTGGCGGCAGAGAGGTGCAACGTGTGTTTGGGAACGGGAGTTTTGGAGCTTGAGGGAAATAAAAGCAGTGGGACGGACAGACTCCATGGCTCAGGAAAAGAAGAAAGGAGGGGTCCTTCCTCCTGATGGCGGGTGGGGATGGATGATCGTGGCTGGTTGCTTTGTGGTAACTGTTTGCACAAGAGCTGTTACAAGaTGCATCTCCATATTCTTCGTTGAGTTTCAGATGCACTTTGCAAGAGATTACTCTGGGACGGCATGGATTCATTCATTAGTAGACTGCACAACCATGCTGTGTGCTCCACTCGGAAGCCTGATTGGGAATCATTTGTCATGTCGTGTAGCTGTAATACTAGGAGGATTCTTGGCCTCCATAGGTTTAGTCCTCAGCTCCTTCGCAACCAGTCTGGAATACCTTTACCTTACCCTGGGAGTGTTGACTGGGTTAGGCTTTGCCCTTTGCTACACTCCAGCTATTGCCATGGTCGGTATCTATTTCTGTGAGAGGAAGGCTCTGGCTTATGGCATTGCCATGTCTGGCAGTGGCATCGGGACCTTCATTCTGGCCCCAGTAGTGCAGCTGCTAATCGAACACTACTCGTGGCGAGGGGCCCTCCTTATTTTAGGGGGCTTTGTATctaacctgtgtgtgtgtggagcttTGTTACGGCCTATAATTCTAAAAGAAGAGGAGGCTTGTCCTCTTCCAGTAGACTCAGAGTGCGAGTATGGTGTTAAGCCTCCCAACGTTCCTACTGGAAAGTCCGTGGATGACAATTTAGAAGTAGACTCTAAACAACGTTGTCTGCAGTACATGCAGGAATACCACTTTTTGCTCATGCCTGACTTCCTAGTGTTGGCAGGCTCCTTCCTGCTGCTGGCCAGTGGGTGCAGTCTTCCATTTGTGTACCTAGTACCGTATGCGCTGGATGTAGGTGTCGGTCATCAGCACGCTGCCTTCCTGATGTCCATACTAGGGGTCATTGACATTGTTGGCAACATCACGTTTGGCTGGCTCACTGACAGGAGGTGTCTGAAGAAGTACAGGAATATATGCTACATGTTTGCTGTGGGAATGGAGGGACTGTGCTGTCTTTTTATACCCCTCTTGCACACATTTGTCTTGCTGGTACCCTTCTCTGTGCTCTATGGGTACTTTGACGGGGCCTATGTTGCCCTCATTCCTGTTGTAACATCAGATGTTGTAGGGACAACATACCTATCATCAGCTCTAGGAGTTGTGTACTTCCTCCACGCTGTTCCTTATCTGGTCAGCCCACCCATTGGAGgtTGGTTGGTAGACACCACAGGGACTTACACAGCTACGTTCTTTCTGAGCGGGTTTGCCCTGATCTCCAGTTCTGTCCTGCTGTTTTCAGTCGCTCTCATTCGCCGTTGTCAGAAGAACCAAAAGAACAGTCTCAACAATGACCCAAAACTGGTGTCATGTGAAGGCAAACAAGCAGACTATTATACTTCTAAAACAAAAGACTTGAGGATAGTTATACCAGCTACTTCATAGCATTGGTATagcaatttgtatttttttttgttattggtTTAATCAAATTTTGTTAGCATGTATAGTCAGTAATAATGCTTAATTGATTGAATTGTTCCTTCAGAGGAGTTACGTTTATAAAAAATCTTATTTGCCTTTTATtgactttgttaaaaaaaaaaaagaatctcaTCTACACTAGcaactttaaaaacacacacatcaggaatttgtatatatttttgtatctaTCTCTCAAATTTCACAATAATGTCAATGAGTTTTTCTTCAATTAAGCAGGTTATGACTAAAGTTCCAACTGTAGTATGTTTATTTAAGTCAGTAGAGGGCAGTGCTGATTTCTAGATATCTGGACGGTCTGAACTGTAAAATTCAGATATGAAGGGTAAATGTCATCACTCTGATGTTTTTGacaagttgtatttttttatgatcaTGAGTTTGCTACAACTAAGCAGTttctatattttacaaaatgctcAAGAAATAGGCTTATGTACGTTTGTATGCATGCTACTAATCTCAACCAGCTGGTACTCATAAATAATTACCATCAGAAGAATGTCAACTTATCAAAAggtaagaaacaaacaaaaacaaaaaacaactatgACAATGGGGGAAAAACCTATATATGAACTACTAAAAGATAGCTGCTTTAAGGTACTgtaatcaacatttttaaataatacccCAGCAGTAGTAtacatatcaaataaataaaaacaatatcagATCTGATGGACCCATA
>XM_043253974.1
CCTGCCATGCATACTtgcataatttttcttttcacgTGTAGGGGGAGTGGAGTCAGAGGTAAATAGGTTCATAGCTCGCACGTCTAAACATGTCGATGTAGCCTGGTCTTGATGTTCCGACAGCTGCAAACTTGTTCGCTCGGTGGAAGCCGCAGGATGTTGATGAACATCCTGCACCGGCTCAATTAAACGAATGTGCAGAAGAGTTTCAAACGTCCGGAGCAGCTCGCGCGATTGCGGAGGAGTCGAATGGGGAACGTTTGGACCCGTGTTTACGGTAGTTTTATAAAATGAGTCACTGACCGGGCCTCACATCTGCAGAAGGAATTCCATGACCGGTGTTAGTGTGGCGGCAGAGAGGTGCAACGTGTGTTTGGGAACGGGAGTTTTGGAGCTTGAGGGAAATAAAAGCAGTGGGACGGACAGACTCCATGGCTCAGGAAAAGAAGAAAGGAGGGGTCCTTCCTCCTGATGGCGGGTGGGGATGGATGATCGTGGCTGGTTGCTTTGTGGTAACTGTTTGCACAAGAGCTGTTACAAGaTGCATCTCCATATTCTTCGTTGAGTTTCAGATGCACTTTGCAAGAGATTACTCTGGGACGGCATGGATTCATTCATTAGTAGACTGCACAACCATGCTGTGTGCTCCACTCGGAAGCCTGATTGGGAATCATTTGTCATGTCGTGTAGCTGTAATACTAGGAGGATTCTTGGCCTCCATAGGTTTAGTCCTCAGCTCCTTCGCAACCAGTCTGGAATACCTTTACCTTACCCTGGGAGTGTTGACTGGGTTAGGCTTTGCCCTTTGCTACACTCCAGCTATTGCCATGGTCGGTATCTATTTCTGTGAGAGGAAGGCTCTGGCTTATGGCATTGCCATGTCTGGCAGTGGCATCGGGACCTTCATTCTGGCCCCAGTAGTGCAGCTGCTAATCGAACACTACTCGTGGCGAGGGGCCCTCCTTATTTTAGGGGGCTTTGTATctaacctgtgtgtgtgtggagcttTGTTACGGCCTATAATTCTAAAAGAAGAGGAGGCTTGTCCTCTTCCAGTAGACTCAGAGTGCGAGTATGGTGTTAAGCCTCCCAACGTTCCTACTGGAAAGTCCGTGGATGACAATTTAGAAGTAGACTCTAAACAACGTTGTCTGCAGTACATGCAGGAATACCACTTTTTGCTCATGCCTGACTTCCTAGTGTTGGCAGGCTCCTTCCTGCTGCTGGCCAGTGGGTGCAGTCTTCCATTTGTGTACCTAGTACCGTATGCGCTGGATGTAGGTGTCGGTCATCAGCACGCTGCCTTCCTGATGTCCATACTAGGGGTCATTGACATTGTTGGCAACATCACGTTTGGCTGGCTCACTGACAGGAGGTGTCTGAAGAAGTACAGGAATATATGCTACATGTTTGCTGTGGGAATGGAGGGACTGTGCTGTCTTTTTATACCCCTCTTGCACACATTTGTCTTGCTGGTACCCTTCTCTGTGCTCTATGGGTACTTTGACGGGGCCTATGTTGCCCTCATTCCTGTTGTAACATCAGATGTTGTAGGGACAACATACCTATCATCAGCTCTAGGAGTTGTGTACTTCCTCCACGCTGTTCCTTATCTGGTCAGCCCACCCATTGGAGgtTGGTTGGTAGACACCACAGGGACTTACACAGCTACGTTCTTTCTGAGCGGGTTTGCCCTGATCTCCAGTTCTGTCCTGCTGTTTTCAGTCGCTCTCATTCGCCGTTGTCAGAAGAACCAAAAGAACAGTCTCAACAATGACCCAAAACTGGTGTCATGTGAAGGCAAACAAGCAGACTATTATACTTCTAAAACAAAAGACTTGAGGATAGTTATACCAGCTACTTCATAGCATTGGTATagcaatttgtatttttttttgttattggtTTAATCAAATTTTGTTAGCATGTATAGTCAGTAATAATGCTTAATTGATTGAATTGTTCCTTCAGAGGAGTTACGTTTATAAAAAATCTTATTTGCCTTTTATtgactttgttaaaaaaaaaaaagaatctcaTCTACACTAGcaactttaaaaacacacacatcaggaatttgtatatatttttgtatctaTCTCTCAAATTTCACAATAATGTCAATGAGTTTTTCTTCAATTAAGCAGGTTATGACTAAAGTTCCAACTGTAGTATGTTTATTTAAGTCAGTAGAGGGCAGTGCTGATTTCTAGATATCTGGACGGTCTGAACTGTAAAATTCAGATATGAAGGGTAAATGTCATCACTCTGATGTTTTTGacaagttgtatttttttatgatcaTGAGTTTGCTACAACTAAGCAGTttctatattttacaaaatgctcAAGAAATAGGCTTATGTACGTTTGTATGCATGCTACTAATCTCAACCAGCTGGTACTCATAAATAATTACCATCAGAAGAATGTCAACTTATCAAAAggtaagaaacaaacaaaaacaaaaaacaactatgACAATGGGGGAAAAACCTATATATGAACTACTAAAAGATAGCTGCTTTAAGGTACTgtaatcaacatttttaaataatacccCAGCAGTAGTAtacatatcaaataaataaaaacaatatcagATCTGATGGACCCATA

Function

symbol description
slc16a12b Predicted to enable creatine transmembrane transporter activity and monocarboxylic acid transmembrane transporter activity. Predicted to be involved in creatine transmembrane transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane. Human ortholog(s) of this gene implicated in cataract 47. Orthologous to human SLC16A12 (solute carrier family 16 member 12).

NR:

description
PREDICTED: monocarboxylate transporter 12-B-like isoform X1

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0015293 symporter activity molecular_function

KEGG:

id description
K11810 SLC16A12; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253973.1 True 2622 mRNA 0.43 7 7597840 7604554
XM_043253974.1 False 2619 mRNA 0.43 7 7597840 7604554

Neighbor

gene id symbol gene type direction distance location
pank1b pank1b,LOC107753437,LOC107669213,LOC107683711,LOC107758439,LOC107594157,LOC108413682 coding upstream 836 7588301 ~ 7597004 (+)
kif20bb kif20bb,LOC107669226,LOC107753438,LOC107584147 coding upstream 31669 7555013 ~ 7566171 (+)
ankrd1b ankrd1b,LOC107584237,LOC107669173,LOC107753461 coding upstream 45346 7549004 ~ 7552494 (+)
ppp1r3cb ppp1r3cb,LOC107584161,LOC107753441,LOC107758435,LOC107704020,LOC107594153,LOC107669176 coding upstream 105015 7487720 ~ 7492825 (+)
mpp3b mpp3b,LOC107669230,LOC107594152,LOC107584156,LOC107753440 coding upstream 111142 7473723 ~ 7486698 (+)
ch25h ch25h,LOC107753436,LOC107584143,LOC107669234,LOC107683723,LOC107758440,LOC107594211 coding downstream 11285 7615839 ~ 7617013 (+)
acta2 acta2,LOC107683715,LOC106531354 coding downstream 26006 7630560 ~ 7636148 (+)
ankrd22 ankrd22,LOC107753431,LOC107758445,LOC107584139,LOC107594161 coding downstream 43627 7648181 ~ 7651744 (+)
rnls rnls,LOC107669231,LOC107584138,LOC107680274,LOC107594162 coding downstream 58552 7663106 ~ 7696729 (+)
atad1b atad1,atad1b,LOC107680273,LOC107669218 coding downstream 138281 7742835 ~ 7747786 (+)
G86219 NA non-coding upstream 93341 7502578 ~ 7504499 (+)
G86202 NA non-coding upstream 208859 7387668 ~ 7388981 (+)
LOC122355189 NA non-coding upstream 278249 7317500 ~ 7319591 (+)
G86141 NA non-coding upstream 299806 7297683 ~ 7298034 (+)
G86140 NA non-coding upstream 300297 7297318 ~ 7297543 (+)
G86275 NA non-coding downstream 96789 7701343 ~ 7701799 (+)
G86283 NA non-coding downstream 114430 7718984 ~ 7719283 (+)
G86268 NA non-coding downstream 115838 7720392 ~ 7723861 (+)
G86374 NA non-coding downstream 242004 7846558 ~ 7846862 (+)
G86460 NA non-coding downstream 452377 8056931 ~ 8060176 (+)
G86143 NA other upstream 289611 7307924 ~ 7308229 (+)
G86142 NA other upstream 292992 7303138 ~ 7304848 (+)
G86029 NA other upstream 1075269 6521829 ~ 6522571 (+)
G86019 LOC107570179 other upstream 1156314 6440821 ~ 6441526 (+)
G85986 adprh,LOC108411014,LOC107726130,LOC105894051,LOC108274007 other upstream 1381273 6214919 ~ 6216567 (+)
LOC122355675 NA other downstream 211269 7815823 ~ 7844083 (+)
msrb1b msrb1b,LOC100705913 other downstream 500594 8105148 ~ 8106780 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other downstream 591410 8195964 ~ 8197904 (+)
arsg arsg,LOC107734203,LOC107660857,LOC107692046,LOC107554066 other downstream 1231894 8836448 ~ 8852449 (+)
pkd1b LOC107723630,LOC107665861,LOC107556563 other downstream 1681109 9285663 ~ 9306831 (+)

Expression


Co-expression Network