ipmkb (ipmk,ipmkb,LOC107746459,LOC107654052,LOC107708928,LOC107695532)


Basic Information

Item Value
gene id ipmkb
gene name ipmk,ipmkb,LOC107746459,LOC107654052,LOC107708928,LOC107695532
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 1628163 ~ 1641997 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254000.1
TCTCGGGGCGGAAACAAACAGCGAAGCGTTCGCAGAACTGCGAGTTCCCGTGCGACATGACTTACTCCGCCAGGATATCGTGTCGATCTTCGCGCTCCGCTCGTTCCGCATCTACCATCTCGGACCAATTACCGCGGGAGGAGCGTAAACATCTCTGAAGCCAGGAAGTGGGATGTGGCCCAGGTGAAAAGCTCGTTATATGGTCGCGAGCGTGGGCGCCGTGACTGATGGCACGCGATCGGTCGCACACATCAGGATGACGCGACGAGGGGTTTCGATCAGTACGTGAATTCGTTGTGTGGAGGACAGTAGTTTAGAGAAATAGCGAGTCATTGCAGCGAAGTCTTCGGTGCGAGGGTCGGCTCGGCATCATAATGGACTCGTCTGTGGCGCTGGGGAGGCTGGAGCTCGCGCGTCCGTTAATGACCCGCGGTTCGTGTTTACCGGAGGGCGCGCAGAGCGCTCACCTGAACGGCTGCGTGCCGCTCTCCCATCAGGTGGCCGGACACAAGTATGGCGTTGATAAAGTGGGTATCTTGCAACATCCCGATGGTACAGTTCTGAAACAGCTGCAGCCTCCTCCAAGAGGACCCAGAGAGATGCAGTTCTACAGTATGGTGTATGCTGAAGACCACTGCGACCCCTGTCTTGTAGACCTCCAAGCGCACCTCCCCAAGTACTATGGCACGTGGTCCTCACCAGACGCACCCACAGACCTGTACCTTAAGCTGGAGGACGTGACACGCAGGTTTCAGAAGCCATGCATCATGGACGTGAAGATCGGCCAGAAGAGTTATGACCcctttgcttcacaggagaaACGGGAACAACAGATCAGGAAATACCCGCTGATGGAGGAGATTGGATTCTTGGTTCTGGGGATGAGGGTGTATAAAGTTGGCTCAGACAGCTTCGACACCTATGACCAGCATTATGGAAGAGGTCTTGTGAAGGACACGATCAAGGAAGGTTTATCCAAGTTCTTCTACAACGGCGACGTCCTCCGCAAAGACGCCGTCACTGCCAGCATCCTCAAAGTCCAGAAGATCCTTCAGTGGTTTGAAGGCCAGAGTCGGTTAAACTTTTATGCAAGCTCTCTGCTCTTCGTCTACGAGGGCGTCTGCGCGCCTAGTCTCGTCTCTCAGACCGTACGGGAGGGCCAGATCGCACCCGAGGCCTGTGAGCAGAACAACAACATCGATCAGAGCCTCTCCACCATTTACTCCCTGCACAAGAAAGGCTGCGGCCGGAGCCACTACCGAGCCAAACAGGACAACGGCGTTTGGAGCTCCTCGCAGCAGCCCAACGGCAACCGTGGCTTGGCAAGACTGGAAGAGGACGGGAAGGAAAGCGAGAGCGAAGCGGGACAGGAAGCGGTCAGTGACGTGGAGGTAAAGATGATTGACTTTGCACATGTCTTCAATAGCGAAGATCCCGACCAGGGTTACGTCTACGGCCTGAAGAACCTGCTGAAGGTCCTTCATCAGATTCTGGAGGAGTGATGGAACGCTTCTTGTCGTTGAAGGTATGAATTGTGTAGCCACTTTCATGTCTGTCCACCCGCCTTTCTCTAATCTGCACTACCTACACCATCAGTGGAGTAACATGTTTGTAATCCTTCGTCTGATGTATGTGCTTTAGTCTTTTAAAAGCTTTGTACAGTTTATGAGATCTTACTCAGGTAAATGAATCTATATTGCTTGTATATTTATCCAGACAAAAGAAGAAACACTCATCATATTATGCCTCAGATATTGCGTATTAGTTCCTGTTTCCAGAGCCattgcaggattttttttttttttttttttttttttttttttatccttttaattttttttaaatcaacgtAATTGAAAATAGGAATTTGATGAGTCAGGATTTAGGAAAATATATTTGACGTTTCTTTCGCATATGCTGCCAATATGACCCTGCCTGTTTCAGACCTGTTGAATTGTGAATTTTatctcaagtttttttttttttgtgatttgaaaaCCTATGTGTGTTCATGTTATGTGATTACTGATGCAATATGACTGAAATAACAGTGGAAGTAATGAAGtagagatcttttttttttcatcatacaGCCCTTGCGGTTTGTATACATCAGATGCCAAAGTTTCCATTAATAACGTTATTATAATATCTtgaattgtgattttaataatacagtcTTTCTTCGGGACACAAACCAACTTACTTGGGTGTCTAGgtatttcataaaatgtttgtacACATTTATTTGCTGACTCCACCAAAATAGGAACTAAAACTTCAGCGTTACTCAATATAAGAGGGGGGAAAAGAATaccctttaaaacataaatgttttaatttcagaaatggattttcctttttaattttttgttggtctctttctttttactttatcATGTTTTGTCttgcatataaaaacatatgaTTTGTCAGTAACCATTTAACTAGAttttgcatttgtggtttacatgtttattagcattttttttttaccaaggaATATTGAGGGTTCCCacaatgtataaaaaatgtaagaataaaattgatattaaaaaaaaatatatataaa

Function

symbol description
ipmkb Predicted to enable inositol tetrakisphosphate kinase activity and inositol-1,4,5-trisphosphate 3-kinase activity. Predicted to be involved in inositol phosphate biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human IPMK (inositol polyphosphate multikinase).
ipmk Enables flavonoid binding activity; inositol tetrakisphosphate 6-kinase activity; and inositol-1,4,5-trisphosphate 3-kinase activity. Involved in inositol trisphosphate metabolic process and necroptotic process. Located in nucleoplasm.

NR:

description
inositol polyphosphate multikinase-like

GO:

id name namespace
GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity molecular_function

KEGG:

id description
K00915 IPMK, IPK2; inositol-polyphosphate multikinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254000.1 True 2572 mRNA 0.45 6 1628163 1641997

Neighbor

gene id symbol gene type direction distance location
pcdh15b pcdh15b,pcdh15,LOC107654051,LOC107695531,LOC106578947,LOC106589399 coding downstream 254079 1217427 ~ 1374084 (-)
a1cf a1cf,LOC107654048,LOC107739758,LOC107695528,LOC107708930 coding downstream 571729 1045416 ~ 1056434 (-)
aarsd1 aarsd1,LOC107739756,LOC107695514,LOC107708900,LOC107598654 coding downstream 610933 1009987 ~ 1017230 (-)
g6pc1a.1 LOC107654044,LOC107598610,LOC107739755,LOC107708934,LOC107695523 coding downstream 623088 999187 ~ 1005075 (-)
kat7b kat7b,kat7,LOC107598609,LOC107739754,LOC107708935,LOC107654043,LOC108443263 coding downstream 637915 983000 ~ 990248 (-)
ube2d1b ube2d1b,ube2d1,LOC105891213,LOC107717106,LOC106607701,LOC107553913,LOC107733527 coding upstream 837 1642834 ~ 1648762 (-)
zgc:171971 zgc:171971,LOC107695535,LOC107596590 coding upstream 10452 1652449 ~ 1658747 (-)
fam13c fam13c,LOC107654055,LOC107727053,LOC107596592,LOC107695537,LOC107746461 coding upstream 119801 1761798 ~ 1774365 (-)
slc16a9b slc16a9b,slc16a9,LOC107654057,LOC107596608,LOC107727058,LOC107695515,LOC107746460 coding upstream 148012 1790009 ~ 1796994 (-)
ccdc6b ccdc6b,ccdc6,LOC107695538,LOC107654058,LOC107746455,LOC107727062 coding upstream 156061 1798058 ~ 1813172 (-)
G84884 NA non-coding downstream 127 1626295 ~ 1628036 (-)
G84885 NA non-coding downstream 23364 1599857 ~ 1604799 (-)
G84882 NA non-coding downstream 42213 1585749 ~ 1585950 (-)
LOC122355293 NA non-coding downstream 81669 1545553 ~ 1546494 (-)
G84795 NA non-coding downstream 446031 1161098 ~ 1182132 (-)
G84892 NA non-coding upstream 7464 1649461 ~ 1650134 (-)
LOC122355537 NA non-coding upstream 68501 1710498 ~ 1737269 (-)
G84909 NA non-coding upstream 85109 1727106 ~ 1729422 (-)
G84919 NA non-coding upstream 109405 1751402 ~ 1754571 (-)
G84928 rhobtb1,LOC107654062,LOC107727061,LOC107745661,LOC107695540 non-coding upstream 322989 1964986 ~ 1969050 (-)
dlx4b dlx4b,LOC107739765,LOC107557342,LOC107708902 other downstream 730646 889710 ~ 897517 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other downstream 1075720 543246 ~ 552443 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other downstream 1127944 496964 ~ 500219 (-)
LOC122355759 NA other downstream 1137784 484438 ~ 490379 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other downstream 1267681 340273 ~ 360482 (-)
ank3b ank3b,LOC107654059,LOC107695539 other upstream 172086 1814083 ~ 1947412 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other upstream 531991 2173988 ~ 2285052 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other upstream 1125911 2767908 ~ 2781353 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other upstream 1447632 3089629 ~ 3103315 (-)
G85366 NA other upstream 1616534 3258531 ~ 3299688 (-)

Expression


Co-expression Network