pdk2a (LOC107754097,LOC107565668,LOC107568951,LOC107677886,LOC107743772,LOC103046317,LOC108426453)


Basic Information

Item Value
gene id pdk2a
gene name LOC107754097,LOC107565668,LOC107568951,LOC107677886,LOC107743772,LOC103046317,LOC108426453
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 12556682 ~ 12564039 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254033.1
CTTATACCATCATACAGCACACATCTCACTACATGCATTATAAACACCgtggctttttttatttaaaaaacctgAATCTCTGAATTTGATATATCAGGTAATTTTCGGTTTCGACCGAGTCAGCAAAATGAAGTTCGTCAGGTTTATAATGAGGAATGCTGCTTTGGCCAGTGCGCCTCATCACATTGAACACTTCTCCAAATTTTCACCTTCTCCACTTTCCATGAAACAGTTTCTGGATTTTGGTTCCACCAACGCATGTgagaaaacatcttttgttttcCTGAGACAAGAGCTGCCGGTGCGTCTGTCAAACATCATGAAAGAGATCAACTTGCTCCCCAAAAGATTACTTACCACACCTTCCGTACAAATGGTTCATAGCTGGTATATACAAAGTTTGATGGAGATCTTGGAATTTTTGGAGAGAAGTCCAGATGACCAATGTGTATTGGAAGAGTTTGTAAATGTTCTGGTCAACATCCGAAACAGGCACAATGATGTTGTACCCACTATGGCCCAGGGTGTGATTGAATATAAAGAAGTATTTGGTCAAGATCCAGTCACTAATCAGAATATTCAGTATTTTCTGGACCGTTTCTACCTGAGCCGGATATCAATCAGAATGCTCATCAACCAGCACACTCTTGTTTTTGATGGTGCTACAAATCCAGTTCACCCCAACACCATTGGCAGTATAGACCCTCATTGCCAGGTGGCAGAAGTTGTTAAAGATGCATATGAAAGTGCCAGGATGCTGTGTGATCAGTACTACCTCAGCTCACCTGACCTGGTGCTTCAGGAACTTAACACTGATAACAGAAACCAGCCTATTAGCATCGTGTACGTGCCTTCCCATCTGTACCATATGCTGTTTGAACTGTTCAAGAATGCAATGAGGGCGACCATTGAGAACCACAGAGAGGACGGTAATCTTCCGCCCATTCAAGTCATGGTGGCCATAGGAGGAGAGGACCTCACCATCAAGATGAGTGACCGAGGTGGTGGAGTTCCCTTCAGGAAGATGGAGAATCTGTTCAGTTACATGTACTCCACGGCACCAAAACCCCAGATAGATGAAAAACATAGCGCTCCTCTGGCTGGGTTTGGTTATGGGTTGCCCATTTCTCGACTCTATGCCAAGTATTTCCAGGGCGATCTTCAGTTATACTCTATGGAGGGTCATGGCACTGATGCAGTCATTCACCTGAAGGCTTTATCCACTGACTCAGTCGAGAGACTCCCAGTGTTTAACAAGACAGCTCGGCGGAACTACGAAGTCACGCAGGGGGCAGATGACTGGTGTGTCCCCAGCCGAGAGCCTCTGGACCTGGCTGTGTTCAGACTGGCCAAGTGAAAAGAAGGACGAATCCTCAAGGATGGATAAAGGACGGTTCTGTGACTGACAGAGATGAGTGCATCGCGATGGCCATAGTTTCCATATGGCTGTGTCCCAACTCACCACTCACTGTGAAGCCACGTAGTCTCTCAGAAATACTGTAGATGTCGCATGCGATTGGATTCCTCAGCACCATgattataatttagtttttttgttttaaggttTGAAAAACTAGGCTTTGTCACAGTGTTACCTTAAATAATTCTAACTCGTATGAAGTGGGACGGAGTGCCAGTGCCAGGTTAATCTGCACTTAATAGCTCTTTCTTTATTGGAAGACTGTTTTAAGTGGAAGTTCCAGTGTGAAGTGAGTCAGACAGACAGTTTACAGAGGTCTTGCTCACTGCGTTAGAGAAATGGACCGGCTAGACTAGTGGAACCAGAATGTACCAACAGGCCTATGCCAAGGATTCAGAGACAGGGTGGTAAAAACCAATATGCAACCTGTGGTGGATCATTTATGTTAAAGTCTACTAGAATGACTGCATTGCAATCAATCAAGAgacatttgtaattaaatgactGATTGCTGCTGTAGGGGTATTCCTGTTCAGAACGGCCAGAAGAGAAAGGCCATGGTTTTGAGTATTAGTGTGTGGCCAAATATGTCTTTGTGATCCATGATGTGTAAGAGTTTAAGAAAGAACCAGTTAGGACTAGAATGCACCAATAAACTCATTGATTTAGACTTGAAACACAACTTATGCACGAGCATTTCAAACACAGtgttttgtgcatgtttatttttgaacatgCTAAAGCATTTTAGATACCTCATTGACTGAAGTTAGTTTCTCGATGTCAACGCGACGACCTTTGCTCAGCTGTTGCCTTTCCGGTTTTCTGGGCCTTTGGCCACTAGCTCTCCCTGCGAATATTATATAGCATGAAATCAGAGCTTCTAATTTTAAGCCTTCTCTTTTGAGAGCATGCCTACTGTATTAAATCAACCATCTGCTTTGAGCTTGTACCATACAACCTTACGTGTAAGGAccatattttgtgtatttatatttttgttgcgTTACCCTtgaaaatctacattttatttttataataaatttttcaTCTTAAGCAAATGATGTGTACAGAAtggaaataaacacattttttgtggaaatgctA

Function

NR:

description
pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 2, mitochondrial-like

GO: NA

KEGG:

id description
K00898 PDK2_3_4; pyruvate dehydrogenase kinase 2/3/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254033.1 True 2527 mRNA 0.42 11 12556682 12564039

Neighbor

gene id symbol gene type direction distance location
LOC122355678 LOC107675002,LOC107754109,LOC107566636 coding downstream 3967 12549656 ~ 12552715 (-)
myo1d myo1d,si:ch211-94l19.4,LOC107743773,LOC107677861,LOC107675020 coding downstream 7753 12488769 ~ 12548929 (-)
psmd11b psmd11,psmd11b,LOC108426450,LOC107743775,LOC107568948,LOC107691212 coding downstream 75848 12472889 ~ 12480834 (-)
uts2r2 ogfod3,zgc:195081,LOC107743776,LOC107691211,LOC106959269 coding downstream 84475 12448036 ~ 12472207 (-)
dhx8 dhx8,LOC107706906 coding downstream 443907 12103878 ~ 12112775 (-)
osbpl7 osbpl7,LOC107565688,LOC107677882,LOC107743767,LOC107754093 coding upstream 89961 12654000 ~ 12665037 (-)
mrpl10 mrpl10,LOC107566794,LOC107754119 coding upstream 102076 12666115 ~ 12667979 (-)
si:ch211-194k22.8 si:ch211-194k22.8,LOC107565757,LOC107754091,LOC107743792,LOC107675005 coding upstream 121073 12685112 ~ 12689248 (-)
cbx1b cbx1b,cbx1,LOC107677876,LOC107743766,LOC107566057,LOC107563783 coding upstream 137209 12701248 ~ 12708174 (-)
ccdc189 LOC107566122,LOC107754089,LOC107675027,LOC107743779,LOC107563782,LOC107677867 coding upstream 150212 12714251 ~ 12717184 (-)
G87746 NA non-coding downstream 69287 12438750 ~ 12487395 (-)
G87695 LOC107669482,LOC107552775 non-coding downstream 209616 12344898 ~ 12347066 (-)
G87660 NA non-coding downstream 403945 12152240 ~ 12152737 (-)
G87659 NA non-coding downstream 405047 12151299 ~ 12151635 (-)
G87610 NA non-coding downstream 585858 11970529 ~ 11970824 (-)
LOC122355629 NA non-coding upstream 49111 12613150 ~ 12638736 (-)
G87860 gabrz,LOC108273489,LOC107675029,LOC107754081,LOC107565977 non-coding upstream 240657 12804696 ~ 12807646 (-)
G88003 NA non-coding upstream 801914 13365953 ~ 13368320 (-)
G88019 NA non-coding upstream 869855 13433894 ~ 13434125 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding upstream 894417 13458456 ~ 13459865 (-)
G87608 NA other downstream 605527 11948540 ~ 11951155 (-)
G87569 NA other downstream 721070 11832879 ~ 11835612 (-)
G87489 NA other downstream 1234079 11321423 ~ 11322603 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other downstream 1510793 11042888 ~ 11045889 (-)
cript cript,LOC107582781,LOC107728714 other downstream 1549728 11005006 ~ 11006954 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other upstream 85344 12649383 ~ 12675472 (-)
G87845 LOC107675011 other upstream 187865 12751904 ~ 12752678 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 860269 13424308 ~ 13432195 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 959629 13523668 ~ 13540301 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other upstream 1045381 13609420 ~ 13691340 (-)

Expression


Co-expression Network