mrpl10 (mrpl10,LOC107566794,LOC107754119)


Basic Information

Item Value
gene id mrpl10
gene name mrpl10,LOC107566794,LOC107754119
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 12666115 ~ 12667979 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254037.1
ttatattgttaatattgtaaCGTAAccataaagacttttattttgtaaacacGAGCAAAACGGTCCCACGTCAAATCCGGACTAAGATGGCAGCGACCTTGTGTGGCAGGCTTTTCCAGAAATCGGGATGGCTGCCACTAAGCCAGAGCGTTCGCCACGGCTCCAAAGCTGTTACTCGTCACAGAAAGCCAATGCACTTTCTCAAGCAGAAGCTGATGGCTGTCACAGAGTACATACCATCCACACCTGCAGCACCTCCTAGTGCTTTGGCTCCACGAGTCAGAAAGACTGAGGAGGAAGGTCCTCTGGCAGCTTTGTTTAGGAAAGACCTGGAAAATTTGTTTAAGGAATGTAAGATGATTGCTGTTGTCCAAAACAATTCCATTATCGCAGAGGACCTTATGGTGCTGAAACACAAACTGAAGAAACACAATATCAGTGTCAGGTTTTTCCCAAACCAGGTGACGAAGTCCTTCATCAGCAACAGCATTTACAGTAACATGTTGCCTCTGTTTGCTGGCCAGACTGTGATATTTGTTAGTAAAGAGCCAAAAGTAAAAGAGATGCTCCAAGCATTGAAAAACAGTCCTCAGATGGTGCTGTTAGGCGCTTGTATAGAGAACACATTGCTTTCGTATAAAGGCATTATCAGTTACTCCAAACTCCCGTCTATGACCACTATCCAGGGGGAGATTGTTGGTGGTCTGACAGTGATGACTTCACGGACTGTCTCAATGCTGCGTCACCATCCAGCGCACCTTTGTGCCCTTCTTCAGCAGTATGTCAAACAGCAAGGCTCCGTGGACGCCGCAGATGCTGTTTCAGATAAAGATACTTCTACAATACAGCAAGCAGCAGcttgaacttttaaaaatgtacatgaatAAACAACTGTGTATGGCTGACAAAGTGCATGTAATAAAATTGAGTTATTTAAAGTTA

Function

symbol description
mrpl10 Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL10 (mitochondrial ribosomal protein L10).

NR:

description
39S ribosomal protein L10, mitochondrial

GO:

id name namespace
GO:0006412 translation biological_process
GO:0042254 ribosome biogenesis biological_process
GO:0005762 mitochondrial large ribosomal subunit cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02864 RP-L10, MRPL10, rplJ; large subunit ribosomal protein L10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254037.1 True 942 mRNA 0.44 5 12666115 12667979

Neighbor

gene id symbol gene type direction distance location
osbpl7 osbpl7,LOC107565688,LOC107677882,LOC107743767,LOC107754093 coding downstream 1078 12654000 ~ 12665037 (-)
pdk2a LOC107754097,LOC107565668,LOC107568951,LOC107677886,LOC107743772,LOC103046317,LOC108426453 coding downstream 102076 12556682 ~ 12564039 (-)
LOC122355678 LOC107675002,LOC107754109,LOC107566636 coding downstream 113400 12549656 ~ 12552715 (-)
myo1d myo1d,si:ch211-94l19.4,LOC107743773,LOC107677861,LOC107675020 coding downstream 117186 12488769 ~ 12548929 (-)
psmd11b psmd11,psmd11b,LOC108426450,LOC107743775,LOC107568948,LOC107691212 coding downstream 185281 12472889 ~ 12480834 (-)
si:ch211-194k22.8 si:ch211-194k22.8,LOC107565757,LOC107754091,LOC107743792,LOC107675005 coding upstream 17133 12685112 ~ 12689248 (-)
cbx1b cbx1b,cbx1,LOC107677876,LOC107743766,LOC107566057,LOC107563783 coding upstream 33269 12701248 ~ 12708174 (-)
ccdc189 LOC107566122,LOC107754089,LOC107675027,LOC107743779,LOC107563782,LOC107677867 coding upstream 46272 12714251 ~ 12717184 (-)
znf646 znf646,LOC107754085,LOC107675018,LOC107743758,LOC107677879,LOC107563786,LOC107565918 coding upstream 69840 12737819 ~ 12746643 (-)
cd37 NA coding upstream 84740 12752719 ~ 12758921 (-)
LOC122355629 NA non-coding downstream 27379 12613150 ~ 12638736 (-)
G87746 NA non-coding downstream 178720 12438750 ~ 12487395 (-)
G87695 LOC107669482,LOC107552775 non-coding downstream 319049 12344898 ~ 12347066 (-)
G87660 NA non-coding downstream 513378 12152240 ~ 12152737 (-)
G87659 NA non-coding downstream 514480 12151299 ~ 12151635 (-)
G87860 gabrz,LOC108273489,LOC107675029,LOC107754081,LOC107565977 non-coding upstream 136717 12804696 ~ 12807646 (-)
G88003 NA non-coding upstream 697974 13365953 ~ 13368320 (-)
G88019 NA non-coding upstream 765915 13433894 ~ 13434125 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding upstream 790477 13458456 ~ 13459865 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding upstream 792166 13460145 ~ 13461245 (-)
G87608 NA other downstream 714960 11948540 ~ 11951155 (-)
G87569 NA other downstream 830503 11832879 ~ 11835612 (-)
G87489 NA other downstream 1343512 11321423 ~ 11322603 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other downstream 1620226 11042888 ~ 11045889 (-)
cript cript,LOC107582781,LOC107728714 other downstream 1659161 11005006 ~ 11006954 (-)
G87845 LOC107675011 other upstream 83925 12751904 ~ 12752678 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 756329 13424308 ~ 13432195 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 855689 13523668 ~ 13540301 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other upstream 941441 13609420 ~ 13691340 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other upstream 1304903 13972882 ~ 13976511 (-)

Expression


Co-expression Network