G2420


Basic Information

Item Value
gene id G2420
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4192124 ~ 4192354 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU2694
CCGCAAATGGCGATCCGGAGGACGATTGCATGGCGGCGGCTTCCGTCTTCCTTCCCGGGTTTTGGCACCAGTGTAGCAAGGTTCAGGATTCAGGAAGGAAGAGGACAGGGTCGGCTTGACTACTGACTGCTTTATTTTAACCAATTCACCATATACAAAACAAAGGGGTGCAGACAGGCACAAAGCGGTCATAAATCATTCACAATTCTCTCTCAACAAAAGACATATCCA

Function

NR:

description
PREDICTED: melatonin receptor type 1A-A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2694 True 231 lncRNA 0.39 1 4192124 4192354

Neighbor

gene id symbol gene type direction distance location
CI01000000_04149689_04156988 CNOT6B, CNOT6, CNOT6A coding upstream 34647 4149689 ~ 4157477 (+)
CI01000000_04138020_04144928 NA coding upstream 47094 4138020 ~ 4147823 (+)
CI01000000_04090995_04093696 SCOC, SCOCB coding upstream 98379 4090547 ~ 4093745 (+)
CI01000000_04082293_04087343 NA coding upstream 104105 4082293 ~ 4088019 (+)
CI01000000_04076566_04077988 NA coding upstream 114050 4076018 ~ 4078074 (+)
CI01000000_04225109_04225608 NA coding downstream 32755 4225109 ~ 4226616 (+)
CI01000000_04355381_04356090 NA coding downstream 163027 4355381 ~ 4356143 (+)
CI01000000_04368179_04392483 NA coding downstream 175485 4367839 ~ 4392990 (+)
CI01000000_04451252_04452143 NA coding downstream 258776 4451130 ~ 4453011 (+)
CI01000000_04462428_04462831 NA coding downstream 270074 4462428 ~ 4463112 (+)
G2294 NA non-coding upstream 72262 4118584 ~ 4119862 (+)
G2385 NA non-coding upstream 207304 3984464 ~ 3984820 (+)
G2427 NA non-coding downstream 8824 4201178 ~ 4201401 (+)
G2752 NA non-coding downstream 231362 4423716 ~ 4423954 (+)
G2755 NA non-coding downstream 233041 4425395 ~ 4425738 (+)
G2776 NA non-coding downstream 263638 4455992 ~ 4456314 (+)
G2780 NA non-coding downstream 271185 4463539 ~ 4463768 (+)
G579 NA other upstream 2283316 1767917 ~ 1908808 (+)
G435 NA other upstream 2759270 1425121 ~ 1432854 (+)
G350 NA other upstream 3515187 671842 ~ 676937 (+)
G252 NA other upstream 3685052 503209 ~ 507072 (+)
G2774 NA other downstream 261424 4453778 ~ 4454232 (+)
G2850 NA other downstream 533632 4725986 ~ 4726482 (+)
G6811 NA other downstream 6012477 10204831 ~ 10321679 (+)
G6820 NA other downstream 6234869 10427223 ~ 10433018 (+)
G7018 NA other downstream 6786135 10978489 ~ 10980872 (+)

Expression


Co-expression Network