noc3l (noc3l,LOC107664623,LOC107654039,LOC107743960)


Basic Information

Item Value
gene id noc3l
gene name noc3l,LOC107664623,LOC107654039,LOC107743960
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 736648 ~ 745103 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254090.1
TTTCCGCGCAGCGTCTCTCTTTTAGTTTACTTCCTGTCCATGTGGTGCGTGTGTGGAGAGTGGATGCTCGCAATATTTTGGATCAAACTTATTTACACGTTTATAACGTCGATAGTTGAGTCCAGTGACGGATCAAAATGGGCCCGGCTTCCAAAAGGAACAAGAAAAAGAAGCCTAGCTTCAGAAAGCTGCTGAAAACCAGCAATGTGAAGCTGGCAAACAAGCTGAAGGATCGTCAGTTTAAGCAACAGAGCTCGGCTAAGAAACAACGCAAAGAACAGAGGAAACTTCGGCAAGCCATTACAGATGTCTCCCACAAGACCATCAAACCCCTGGAAAGATATATGAAGAAACCAGAAggggaggaagaagaagaggaggaggagttcCTGGAGTCTCTGCCTGTAGACATGATGGATGAGGATGACCTCGAGCAGATCAGAGCCATGGCGAAGAAAGCTTCCTTTCTGACTCGAGACATCTCAAGCTGTGCTGCAGTGCATTCCAAAAAGCGTAAGTCCGAGCAGCCGGTGGAGAAGTATGAGAAGATGCCCAGGAAGATGCAGcaggaggaagagaaagagctCATTCATCTGCTGCCCATCAAAGACAAAAGGGGTCTGATCCCTCAGACCATGGAGAAGCCCGTTGTGAAGGaggcagaggaagaggaggaaccGGTCGACCAGGATGAGTTAAAAGAGGAGGAACCGGAGAGCGCTCCGTTGTTATCTCCTCAGGAGCAGCTGGCGCTCCGCACTCAGAGGCTGACGGAGAAGAAGCTGCGCATCGCAAGTCTGTCGTCTGCAGTACTCTCCGATCCGCACGTCAACATCAAGAGGCTGAAGGAGTTGAGGGCCATGCTGATGGAGACGGACCCCTGCATCGCTGTCACAGTCAGAAAGTTAGTCATGGTGTCCCTCCTGGAGGTGTTTAAGGACGTTGTGCCGTCGTATCGAATCCGACCGCTGACGGAGGAGGAGAAGGCTACAAAGgTGAAAAAAGAGACGCTGCAGCTGAGGGAGTTTGAGGAGGGCATCGTCAGCCAGTATAAGTTCTACTTGGAAGATCTGGAACAGACAGTCAAAGACTGGAAGCAGAAGAAGCAGAAGAGAAGTCAGGCCGTGTCACTTCAGAGTTATGACGGTCTTGCTGAAGTGGCCATCAGGTGCATCTGTGATCTCCTGGTAGCTCTGCCGCACTTCAATTTCCACAACAATATCATAGTCATGGTGGTGCCCCTGATGAGCGACCCCGTCAGGAAGGTGTCTGAGATGTGCTGCGGAGCCGTCAGCAGACTGCTGAAGCAGGACAAACTGGGTCAGGCCTCGCTAGCGGTGGTGAAGGTCATCTCAGGCATGGTCAAGAGCAGGAACTACAAAGTCAAACCTGAGGTGCTGAACTGTCTTCTCTGTCTGAGAATAAAAGAAGTGGAAATGAAGAAAGATACAGAAGATGCTGCACCAAAAAAGAAGTTCATGTCCTTCAAGGACAAGCGGGCAAACCTGTCCAGGATGCAGCGGAAGTGGAAGAAAGCTGAGGAGAAACTACAGAAAGAGCTTCTAGAAGCCGAGGCTTCAGAGAACAAGGACAAGAAAATTAAATTGcaCACAGAGACGCTCAACATCGTGTTCCTCATCTACTTCAGAATACTGAAGAAAGCTCAGAAGTCCGTCTTACTGCCCTCCGTTTTAGAAGGCCTCGCAAAGTTTGCTCATTTGATAAACTTGGAGTTCTTCGATGATTTGTTGGCGGTTCTGTACGGCCTCGTCACGTCGGGTGATCTGACGTATCGGGAGAGCCTTCACTGCATCCTCACATCCTTCCACATCCTCTCAGGACAAGGTGACGTCCTCAACATCGACCCTTTGAAATTCTACAACCACTTATATAAAACGCTGCTGACGCTGCACGCAGGAGGATCGAACGAAGACACGTCCATCGTGCTGCAGTGTCTGGACATCATGCTGACCAAACGCAGGAAGCAGGTGACTCTGCAGAGAGCGCAGGGCTTCCTGAAGAGACTGAGCACGCTCGGGCTGCACCTGCTGCCTGACTCCAGTGTGGGCATCCTGGCAGCCAACAGAACGCTGATGCATACCTTCCCTAAGTGTGACATCCTGCTGGATAATGAGATGCAGGGCAGTGGTGTGTATCTGCCAGAGCTGGATGTTCCCGAGTACTGCAACCCGCAGAACACGGCATTGTGGGAGCTTCACCTACTGAAGAGACACTATCACCCCGTGGTGAGGACGCTGGCGGTTCATCTGATGAAAGGAGCTCCTAGTGAAGGGTCAGGGGCTCTCAGCATGGAGCTCAGCAGAAGGACTCCGGTGCAGCTGTTCGAAGACTACAGCGTGAAAGACATGACCTTCAACCCTCCCGTCGGCCCTCCCTCAAAGAAAAAGGAGCATTTCACGATCGGTGAAGCGTTTTTAGATTCTGAGCTGAAGACGATGAGCGACGCTGCTCTTCAAGACGAGAGCGAGCAGACGAGCCTGGACTTCACGTCACAACACACGCAGCAGGAAACATGACCGACTGGCACTCGAGAGCCGAGAAGCCGttctgtgtaaaataaatgcccAGAGATACCA

Function

symbol description
noc3l Predicted to enable chromatin binding activity. Acts upstream of or within muscle organ development and regulation of lipid metabolic process. Located in nucleus. Is expressed in several structures, including alar plate midbrain region; brain; head; immature eye; and trunk. Orthologous to human NOC3L (NOC3 like DNA replication regulator).

NR:

description
nucleolar complex protein 3 homolog

GO:

id name namespace
GO:0019216 regulation of lipid metabolic process biological_process
GO:0007517 muscle organ development biological_process
GO:0005730 nucleolus cellular_component

KEGG:

id description
K14834 NOC3; nucleolar complex protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254090.1 True 2597 mRNA 0.51 21 736648 745103

Neighbor

gene id symbol gene type direction distance location
fra10ac1 fra10ac1,LOC107664625,LOC107654038,LOC107708941,LOC107557362,LOC107743956 coding downstream 86460 640871 ~ 650188 (-)
rbp4 rbp4,LOC107743953,LOC107664626,LOC107598599,LOC107557363,LOC107653948 coding downstream 110126 623911 ~ 626522 (-)
LOC122355758 NA coding downstream 259109 469843 ~ 477539 (-)
LOC122355175 NA coding downstream 291823 439870 ~ 444825 (-)
mapta LOC107598589,LOC107732173,LOC107654024,LOC107664605 coding downstream 302372 407356 ~ 434276 (-)
tbc1d12b LOC107743959,LOC107654040,LOC107708937,LOC107664632 coding upstream 1164 746267 ~ 762604 (-)
LOC122355750 LOC107654041 coding upstream 33398 778501 ~ 797724 (-)
abi3b abi3b,LOC107654042,LOC107598650,LOC107743966,LOC107664617,LOC107708878 coding upstream 53718 798821 ~ 802802 (-)
itga3b itga3,itga3b,LOC107708875,LOC107664597,LOC107557321 coding upstream 92711 837814 ~ 867877 (-)
kat7b kat7b,kat7,LOC107598609,LOC107739754,LOC107708935,LOC107654043,LOC108443263 coding upstream 237897 983000 ~ 990248 (-)
G84666 slc35g1,si:ch211-197g18.2,LOC107598601,LOC107654036,LOC107664634,LOC107664593,LOC107557359,LOC107708939 non-coding downstream 72902 660089 ~ 663746 (-)
G84654 NA non-coding downstream 124801 610067 ~ 611847 (-)
G84547 NA non-coding downstream 258217 478023 ~ 478431 (-)
LOC122355423 NA non-coding downstream 350191 385889 ~ 386457 (-)
LOC122355197 NA non-coding downstream 351626 382572 ~ 385022 (-)
G84700 NA non-coding upstream 14822 759925 ~ 789003 (-)
LOC122355303 NA non-coding upstream 21551 766654 ~ 769898 (-)
LOC122355070 NA non-coding upstream 201924 947027 ~ 979785 (-)
G84793 prkg1,prkg1b,LOC107695529,LOC107654050 non-coding upstream 319830 1064933 ~ 1065345 (-)
LOC122355531 NA non-coding upstream 403836 1148939 ~ 1172741 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other downstream 184205 543246 ~ 552443 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other downstream 236429 496964 ~ 500219 (-)
LOC122355759 NA other downstream 246269 484438 ~ 490379 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other downstream 376166 340273 ~ 360482 (-)
G84521 NA other downstream 415388 319330 ~ 321260 (-)
dlx4b dlx4b,LOC107739765,LOC107557342,LOC107708902 other upstream 144607 889710 ~ 897517 (-)
ank3b ank3b,LOC107654059,LOC107695539 other upstream 1068980 1814083 ~ 1947412 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other upstream 1428885 2173988 ~ 2285052 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other upstream 2022805 2767908 ~ 2781353 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other upstream 2344526 3089629 ~ 3103315 (-)

Expression


Co-expression Network