tbc1d12b (LOC107743959,LOC107654040,LOC107708937,LOC107664632)


Basic Information

Item Value
gene id tbc1d12b
gene name LOC107743959,LOC107654040,LOC107708937,LOC107664632
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 746267 ~ 762604 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254091.1
ctatctatctatctagtcaCTGTGTCAGTtctacagtatatgtacagtatagtAGATCTTGTTATTAATATGTCCAGCAGGGGGCGCGTGGACTCTCCCGTTAGTGAACCAACGAATGACGTCACTGGAATTTCAAGATGGCTCCGGATCACGGTCAGGATACGGTCTTCTACCGGTCTGAGACGGGAAAGCGTTGATGTTTTAGCTGGCATGTCTGCTAACTCACGGTATCTGCGTACTATTATCTATCACCATCACCCCGTTAATGTGGCGGAGGACAGCGTGAATAGGCGTCATGGTGAAAGAAGAGCGGGGTACAACACTGAACTACAGCGCCTCGGCTGTCAAGCGTTTTGAATGAGATGGAAAAGACCGAGGATGAACCTGTACagatatatttcttttatatgaGAGAGTAGCACGAGACGGTAACACTCCTCACTGGATGGTTTAAACGAGGACTGCAGTAGAGGTCATCTGCGGTGCTATCAGGGATTGGGCTGCGGCCGATGGGTTATCCGCCCAGCAGGGTCCAAAAGAGCATTGTCGTCTCCGAGCATTGTGGGCATCACCTGTGAAGCTGATGGTGGAGTCATCTTCCTCTGGAGGCAGGGGTGCTGAGGAAGGCGGACCACCTCCACGCATCGCAGATGTTACAGACAGGCGGGAGAACATAATGCAAGGCATGTTCTCCCACGCTGGATCAACGCGGAGAGAGAAAGGCCAGGACCACGAGGCGGCGGAGTCACGTGACGAAGCACAGCACCAGACCAGCAACCAGCCGTGTGGCACTAAGCTCCCAAACGGACATGCGGGCCACGGTTCGCGTGAAGTGACCGAGCGGGACGACCCCGAGTCATCTCATCCTGCAGGAAGCTACTCGAATTCCCAAGATGTCCGCGTGATTGCAAACGGAGAACTGTCGGCAGGCTCCAGAGGTGGTGCTTTGGATGCCGGCGCTTCTCCTCCACCTCAAGAAGAGAGAACTACCAGCTCGGAGGACTGCTCGAACTCCCAAAACGACACCAGAAGTTGTTCCGAAGGCGACCCGTCGACTCCGAAACTCTCTCTCAGGACGTTCTCCTCCAGCGCTTTCCTCAATGCTGACTCCGCTCCTCTCAGCCcggacgacgacgacgacgacgacgagaCCTTTTCCGCGTCGGACAGACCTGACGACCTGAGCTTCACGGACGTGAGTCTGAAACCCAGGAACACTTATGAGATCAGTCGACGTCAGAGCGCCCCAGACAACATCCCTGGTGTGTTGAGTGTTGCTGTCGCAGATCTGACTCTCAGCCAGAGGAAACATGGCATCTCTGAGATCTTCAGCAGAAGTCTGTTCTCCAGAAAGCAGAGGGAGGCCCAGAGCGCACCAGGATGGAAACTCTTTGGAAAGGTCCCGTTGAGAGAGAGTCCCCCCAAAGACTCCAAAACCATTCAGCAGGAAGGTAACCCAGGCAATCTCACATCTGTATCTACACCCAATCTCTTAAGTTCAGGGGAGTACGAGGCTAAGGTGTCTAAATCGGGCCAGAGTCCCTCCCTGCCCGCTCAGGGCCGACGGAAGAACCTGGAATTCGAACCATTGTCCACCACAGCCCTCATATTAGAGGACCGCCCCTCGAACCTCCCAGCTAAGTCGGAGGAAGAGGCACAGCGCCACCGCCAGGAGTATGATGAAATGGTTGCGGAGGCCAAGAAGAGAGAGCTGAAGGAGGcccagaagaagaaaaagcagatGAAGGAAAGATTTAAACAGGAGGAAAGCATCGCCAATGCCATGGTGGTTTGGAACAACGAAATCCTTCCCAACTGGGAAAGCATGCGTGGTACGCGGCGTGTGAGGGATCTGTGGTGGCAAGGTCTTCCTCCCAACGTGAGGGGGAAAGTCTGGAGTCTGGCCATTGGGAATGAGCTGAACATAACCTCAGacTTGTATGAGATCTTTCTCTCACGGGCTAAGGAGCGCTGGAAGAGCTTCAGGGAGACAGGCAGTGAGATGGAGTCAGAAGCTGACAGCGCGGACCGTGAGTCCAGTCTGGATTTGATCAAACTGGACATCTCGCGCACATTTCCACCGCTCTTCATCTTCCAGAAGGGTGGGCCGTACCATGATCTCCTGCACAGCATTCTGGGAGCATACACCTGTTACAGACCTGACGTGGGATATGTTCAGGGAATGTCCTTCATAGCTGCCGTGTTGATTCTCAACCTGGAGGAGGCCGACGCTTTCATCGCCTTCGCCAACCTCCTCAACAAACCCTGTCAGATGGCTTTCTTCAGAGTGGACCACGAGCTGATGCTGAAGTACTTTGCAGCATTTGAGGTGTTTTTTGAGGAAAATCTCCCGAGACTTTTTAATCACTTCAAGAGTTACAACCTCACCCCTGACCTGTATCTCATAGACTGGATCTTCACCCTCTACACTAAGTCCCTGCTGCTGGATGTGGCGTGTCGGGTGTGGGACGTGTTCTGCAGAGACGGCGAGGAGTTCCTGTTTCGCACGGGGCTCGGGATTCTGCGGCTCTACGAGGAAGTGCTCCTGCAGATGGACTTCATCCACATCGCTCAGTTCCTGACCAGACTCCCGGAGGACACGCCGTCCGAACGCCTTTTCAGCTGCATCGCCAACACTCAGATGATTAGCAGCAACAGGAAGTGGACACAGGTGTTTAATGCCCTCATAAAGgataaagaaatggaaaaaagcagcAGTCCTACAGTGAAAAACTCTTGAACtctcaacgttttttttttttttttttttatatttccagtTGACTTTAACTCTCCATTAGAAGAGAGGATTGTATAAAACGGGCTCAAagaaatgacatgaagaaaaagcTAAACTTGATTCATTTGTTAACCTTGCCAGTATTACTGatgttacacatttgtataaGTGAAAAATACAAGCATTTTATGAGAAAATATTCCACCAGCTTAGTCATGTACTGTACCGGATACCAGCATCAGGCTTTTTCTTGATATTGGTGCATTTTGAAGAAGTGTGCCGACATACCATTAACTCAATTTGTATGCTGAAGTATATTCGGTCGGAGCCTGTTTAATGCACTTGAGATTTTAATAATGGAATAGCGAGGttctgagatttaaaaaaaaaatgtgatttctttTAAGCGGTCTTGTTTTGTAGAGCAAGACCCTAATGAAGTGCAATAGAATATGTCAGATGCAGTTAATAATGCAGGAGTAATGCATAGAGTGTGTTGTTGAGATGTTTGAAAGCATTTTGCTGCTTCTTGACGAAGAATTATTGCATTGAGTAGTCCCATTCTGCTACTTTAATTTCTTCAAGACACTAATATGTAGCCTAGAGCTGCaaaacgattaatcgcgattaattgcattcaaaatagatgtttgtttacatactgtatgtttactgtatatatttattatgcatatataaatacacacacatgtatatttattaaaataatgtgtaaag
>XM_043254092.1
tctatctatctatctagtcaCTGTGTCAGTtctacagtatatgtacagtatagtAGATCTTGTTATTAATATGTCCAGCAGGGGGCGCGTGGACTCTCCCGTTAGTGAACCAACGAATGACGTCACTGGAATTTCAAGATGGCTCCGGATCACGGTCAGGATACGGTCTTCTACCGGTCTGAGACGGGAAAGCGTTGATGTTTTAGCTGGCATGTCTGCTAACTCACGGTATCTGCGTACTATTATCTATCACCATCACCCCGTTAATGTGGCGGAGGACAGCGTGAATAGGCGTCATGGTGAAAGAAGAGCGGGGTACAACACTGAACTACAGCGCCTCGGCTGTCAAGCGTTTTGAATGAGATGGAAAAGACCGAGGATGAACCTGTACagatatatttcttttatatgaGAGAGTAGCACGAGACGGTAACACTCCTCACTGGATGGTTTAAACGAGGACTGCAGTAGAGGTCATCTGCGGTGCTATCAGGGATTGGGCTGCGGCCGATGGGTTATCCGCCCAGCAGGGTCCAAAAGAGCATTGTCGTCTCCGAGCATTGTGGGCATCACCTGTGAAGCTGATGGTGGAGTCATCTTCCTCTGGAGGCAGGGGTGCTGAGGAAGGCGGACCACCTCCACGCATCGCAGATGTTACAGACAGGCGGGAGAACATAATGCAAGGCATGTTCTCCCACGCTGGATCAACGCGGAGAGAGAAAGGCCAGGACCACGAGGCGGCGGAGTCACGTGACGAAGCACAGCACCAGACCAGCAACCAGCCGTGTGGCACTAAGCTCCCAAACGGACATGCGGGCCACGGTTCGCGTGAAGTGACCGAGCGGGACGACCCCGAGTCATCTCATCCTGCAGGAAGCTACTCGAATTCCCAAGATGTCCGCGTGATTGCAAACGGAGAACTGTCGGCAGGCTCCAGAGGTGGTGCTTTGGATGCCGGCGCTTCTCCTCCACCTCAAGAAGAGAGAACTACCAGCTCGGAGGACTGCTCGAACTCCCAAAACGACACCAGAAGTTGTTCCGAAGGCGACCCGTCGACTCCGAAACTCTCTCTCAGGACGTTCTCCTCCAGCGCTTTCCTCAATGCTGACTCCGCTCCTCTCAGCCcggacgacgacgacgacgacgacgagaCCTTTTCCGCGTCGGACAGACCTGACGACCTGAGCTTCACGGACGTGAGTCTGAAACCCAGGAACACTTATGAGATCAGTCGACGTCAGAGCGCCCCAGACAACATCCCTGGTGTGTTGAGTGTTGCTGTCGCAGATCTGACTCTCAGCCAGAGGAAACATGGCATCTCTGAGATCTTCAGCAGAAGTCTGTTCTCCAGAAAGCAGAGGGAGGCCCAGAGCGCACCAGGATGGAAACTCTTTGGAAAGGTCCCGTTGAGAGAGAGTCCCCCCAAAGACTCCAAAACCATTCAGCAGGAGTACGAGGCTAAGGTGTCTAAATCGGGCCAGAGTCCCTCCCTGCCCGCTCAGGGCCGACGGAAGAACCTGGAATTCGAACCATTGTCCACCACAGCCCTCATATTAGAGGACCGCCCCTCGAACCTCCCAGCTAAGTCGGAGGAAGAGGCACAGCGCCACCGCCAGGAGTATGATGAAATGGTTGCGGAGGCCAAGAAGAGAGAGCTGAAGGAGGcccagaagaagaaaaagcagatGAAGGAAAGATTTAAACAGGAGGAAAGCATCGCCAATGCCATGGTGGTTTGGAACAACGAAATCCTTCCCAACTGGGAAAGCATGCGTGGTACGCGGCGTGTGAGGGATCTGTGGTGGCAAGGTCTTCCTCCCAACGTGAGGGGGAAAGTCTGGAGTCTGGCCATTGGGAATGAGCTGAACATAACCTCAGacTTGTATGAGATCTTTCTCTCACGGGCTAAGGAGCGCTGGAAGAGCTTCAGGGAGACAGGCAGTGAGATGGAGTCAGAAGCTGACAGCGCGGACCGTGAGTCCAGTCTGGATTTGATCAAACTGGACATCTCGCGCACATTTCCACCGCTCTTCATCTTCCAGAAGGGTGGGCCGTACCATGATCTCCTGCACAGCATTCTGGGAGCATACACCTGTTACAGACCTGACGTGGGATATGTTCAGGGAATGTCCTTCATAGCTGCCGTGTTGATTCTCAACCTGGAGGAGGCCGACGCTTTCATCGCCTTCGCCAACCTCCTCAACAAACCCTGTCAGATGGCTTTCTTCAGAGTGGACCACGAGCTGATGCTGAAGTACTTTGCAGCATTTGAGGTGTTTTTTGAGGAAAATCTCCCGAGACTTTTTAATCACTTCAAGAGTTACAACCTCACCCCTGACCTGTATCTCATAGACTGGATCTTCACCCTCTACACTAAGTCCCTGCTGCTGGATGTGGCGTGTCGGGTGTGGGACGTGTTCTGCAGAGACGGCGAGGAGTTCCTGTTTCGCACGGGGCTCGGGATTCTGCGGCTCTACGAGGAAGTGCTCCTGCAGATGGACTTCATCCACATCGCTCAGTTCCTGACCAGACTCCCGGAGGACACGCCGTCCGAACGCCTTTTCAGCTGCATCGCCAACACTCAGATGATTAGCAGCAACAGGAAGTGGACACAGGTGTTTAATGCCCTCATAAAGgataaagaaatggaaaaaagcagcAGTCCTACAGTGAAAAACTCTTGAACtctcaacgttttttttttttttttttttatatttccagtTGACTTTAACTCTCCATTAGAAGAGAGGATTGTATAAAACGGGCTCAAagaaatgacatgaagaaaaagcTAAACTTGATTCATTTGTTAACCTTGCCAGTATTACTGatgttacacatttgtataaGTGAAAAATACAAGCATTTTATGAGAAAATATTCCACCAGCTTAGTCATGTACTGTACCGGATACCAGCATCAGGCTTTTTCTTGATATTGGTGCATTTTGAAGAAGTGTGCCGACATACCATTAACTCAATTTGTATGCTGAAGTATATTCGGTCGGAGCCTGTTTAATGCACTTGAGATTTTAATAATGGAATAGCGAGGttctgagatttaaaaaaaaaatgtgatttctttTAAGCGGTCTTGTTTTGTAGAGCAAGACCCTAATGAAGTGCAATAGAATATGTCAGATGCAGTTAATAATGCAGGAGTAATGCATAGAGTGTGTTGTTGAGATGTTTGAAAGCATTTTGCTGCTTCTTGACGAAGAATTATTGCATTGAGTAGTCCCATTCTGCTACTTTAATTTCTTCAAGACACTAATATGTAGCCTAGAGCTGCaaaacgattaatcgcgattaattgcattcaaaatagatgtttgtttacatactgtatgtttactgtatatatttattatgcatatataaatacacacacatgtatatttattaaaataatgtgtaaag

Function

NR:

description
PREDICTED: TBC1 domain family member 12-like isoform X1

GO:      GO:0005097,GO:0032313

KEGG:

id description
K24795 TBC1D12; TBC1 domain family member 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254091.1 True 3478 mRNA 0.49 15 746267 762603
XM_043254092.1 False 3422 mRNA 0.49 14 746267 762604

Neighbor

gene id symbol gene type direction distance location
noc3l noc3l,LOC107664623,LOC107654039,LOC107743960 coding downstream 1164 736648 ~ 745103 (-)
fra10ac1 fra10ac1,LOC107664625,LOC107654038,LOC107708941,LOC107557362,LOC107743956 coding downstream 96079 640871 ~ 650188 (-)
rbp4 rbp4,LOC107743953,LOC107664626,LOC107598599,LOC107557363,LOC107653948 coding downstream 119745 623911 ~ 626522 (-)
LOC122355758 NA coding downstream 268728 469843 ~ 477539 (-)
LOC122355175 NA coding downstream 301442 439870 ~ 444825 (-)
LOC122355750 LOC107654041 coding upstream 15897 778501 ~ 797724 (-)
abi3b abi3b,LOC107654042,LOC107598650,LOC107743966,LOC107664617,LOC107708878 coding upstream 36217 798821 ~ 802802 (-)
itga3b itga3,itga3b,LOC107708875,LOC107664597,LOC107557321 coding upstream 75210 837814 ~ 867877 (-)
kat7b kat7b,kat7,LOC107598609,LOC107739754,LOC107708935,LOC107654043,LOC108443263 coding upstream 220396 983000 ~ 990248 (-)
g6pc1a.1 LOC107654044,LOC107598610,LOC107739755,LOC107708934,LOC107695523 coding upstream 236583 999187 ~ 1005075 (-)
G84666 slc35g1,si:ch211-197g18.2,LOC107598601,LOC107654036,LOC107664634,LOC107664593,LOC107557359,LOC107708939 non-coding downstream 82521 660089 ~ 663746 (-)
G84654 NA non-coding downstream 134420 610067 ~ 611847 (-)
G84547 NA non-coding downstream 267836 478023 ~ 478431 (-)
LOC122355423 NA non-coding downstream 359810 385889 ~ 386457 (-)
LOC122355197 NA non-coding downstream 361245 382572 ~ 385022 (-)
LOC122355303 NA non-coding upstream 4050 766654 ~ 769898 (-)
LOC122355070 NA non-coding upstream 184423 947027 ~ 979785 (-)
G84793 prkg1,prkg1b,LOC107695529,LOC107654050 non-coding upstream 302329 1064933 ~ 1065345 (-)
LOC122355531 NA non-coding upstream 386335 1148939 ~ 1172741 (-)
G84795 NA non-coding upstream 398494 1161098 ~ 1182132 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other downstream 193824 543246 ~ 552443 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other downstream 246048 496964 ~ 500219 (-)
LOC122355759 NA other downstream 255888 484438 ~ 490379 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other downstream 385785 340273 ~ 360482 (-)
G84521 NA other downstream 425007 319330 ~ 321260 (-)
dlx4b dlx4b,LOC107739765,LOC107557342,LOC107708902 other upstream 127106 889710 ~ 897517 (-)
ank3b ank3b,LOC107654059,LOC107695539 other upstream 1051479 1814083 ~ 1947412 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other upstream 1411384 2173988 ~ 2285052 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other upstream 2005304 2767908 ~ 2781353 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other upstream 2327025 3089629 ~ 3103315 (-)

Expression


Co-expression Network