G2730


Basic Information

Item Value
gene id G2730
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4386383 ~ 4390152 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU3038
TGACCAGGGGCCAAGCCTCCACTCAGCAGGGCACAGGTTGCGATTGCAGTCTCTGCGAGATTCTGGGCGCTCGTCGCTGCAGTAACGACTGCGGATGGATTTGTACTTGTCGTCGACCAGAGGTTGGACGCAGCGTACGGAGCGTGTCTGAGTGCCTGTCTTCCCACAAGACTTACTGCATTCACCCCACTCTCCAGCCACCCAGATAGGCTGAGCACACTCTCTCAGGTAACAGTCTCTAAACAGGGGCGGAGGCTGCTTGATTTTCTCACAGAACCTGCGATGGACCATCCTCATCTCTGTGTTCTTACGGCAGCCATAACGTGTCATCTGAATGCCTCCTCCACAGGTCTTGGAGCAAGGTGCCCATCTCTTCACCACCCAGGAGTATGGCACAGCATTATCAGGAACCATGTTATTCTCATTGGCACTGTCACTTGGTCTGTCATTATCAGTGATGTATTTGATCGACACTTTCACTTTGGCCGATCCATGCATTCGGATCATGACAACCACATCGTTTTTCAGGGGGCCATTGGTTTGAATGGTGTCCTTATTGTTTTTATTCTCATACTCCCATTCCAGTCCTTTTTCGATAACTGAGCGCGTCTCTGGGTAGTCTCCATGTGCGTTGAGAAAGAAATCACCCGACGCTTTATTCCTGATAGCTAAAATGTGAGTAGTCCCATTAAGTTCCTGGATGAAGAGATGTCTCGCCCCTCTGGGAACTTCAAGCACCTTAATGACACCTTTCTTCTCTACAAAGGTGAAGTTAAACTTGTGAGTCTTGCACTTGGTTCCGTCTCCCC

Function

NR:

description
uncharacterized protein LOC110494756

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3038 True 809 TUCP 0.30 6 4386383 4390152

Neighbor

gene id symbol gene type direction distance location
CI01000000_04121742_04131508 MMP17B coding downstream 254515 4120796 ~ 4131868 (-)
CI01000000_04119261_04119788 NA coding downstream 266557 4119261 ~ 4119826 (-)
CI01000000_04101256_04111943 NA coding downstream 274440 4101256 ~ 4111943 (-)
CI01000000_04079738_04081018 MIF coding downstream 305365 4078121 ~ 4081117 (-)
CI01000000_04064625_04068473 CLP1 coding downstream 317381 4064519 ~ 4069002 (-)
CI01000000_04568874_04570653 NA coding upstream 178422 4568574 ~ 4571382 (-)
CI01000000_04587327_04589208 NA coding upstream 196807 4586959 ~ 4589208 (-)
CI01000000_04589952_04595231 PPID coding upstream 199800 4589952 ~ 4595781 (-)
CI01000000_04597720_04599733 NA coding upstream 207366 4597518 ~ 4600169 (-)
CI01000000_04728056_04730605 NA coding upstream 337693 4727845 ~ 4730771 (-)
G2686 NA non-coding downstream 143206 4229249 ~ 4243177 (-)
G2673 NA non-coding downstream 194085 4192036 ~ 4192298 (-)
G2664 NA non-coding downstream 206549 4179608 ~ 4179834 (-)
G2663 NA non-coding downstream 208050 4178109 ~ 4178333 (-)
G2659 NA non-coding downstream 218001 4167998 ~ 4168382 (-)
G2738 NA non-coding upstream 11515 4401667 ~ 4402038 (-)
G2739 NA non-coding upstream 12296 4402448 ~ 4402719 (-)
G2756 NA non-coding upstream 35001 4425153 ~ 4425670 (-)
G2885 NA non-coding upstream 107124 4497276 ~ 4497707 (-)
G2892 NA non-coding upstream 155271 4545423 ~ 4548717 (-)
G2484 NA other downstream 812829 3570066 ~ 3573554 (-)
CI01000000_03564077_03564373 NA other downstream 819292 3562887 ~ 3567571 (-)
CI01000000_03245643_03246684 NA other downstream 1139668 3245134 ~ 3246721 (-)
CI01000000_03172562_03175863 HIGD2A other downstream 1210542 3170391 ~ 3175863 (-)
CI01000000_05465020_05466303 NA other upstream 1073906 5464058 ~ 5466516 (-)
G3650 NA other upstream 1150311 5540463 ~ 5540881 (-)
G3716 NA other upstream 1610255 6000407 ~ 6000769 (-)
G3931 NA other upstream 1766861 6157013 ~ 6403525 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 other upstream 6014176 10407395 ~ 10409950 (-)

Expression


Co-expression Network