dnajc9 (dnajc9,LOC107694081,LOC107684784,LOC107751706,LOC107753312)


Basic Information

Item Value
gene id dnajc9
gene name dnajc9,LOC107694081,LOC107684784,LOC107751706,LOC107753312
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4167639 ~ 4170922 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254160.1
GTGACGTTTACACAAAGCGCCAAAATTTTGGCGCGACCTGTTAAGACAATCCTATGCTGTTGTGTGCTGGAAGCGTTTGGTTGTCGGTTTCTGTTtaggaatatttaaacattttctgttcAGTGTCATTCGTCATCGTTAATTTTATCTCTCTGTCATGGGTTTACTGGAGCAGTGTGAGGAGATCTTCAAGACCTCTAACTTGTATGAAGTTCTGGGTGTTTGTAAAGAAGCATCTGACTCCGAGATCAGACGCGGATATTATAAAGTCTCTCTGCAGGTTCATCCAGATAGAGCTCCTGGTGATGAGTTAGCCACCACCAAGTTTCAGGTGCTGGGAAAGGCTTATGCTGTGTTGGCCGACAAGGACCAAAGGGCAGTCTATGATGAACAGGGAGTAGTGGATGAAGAATCAGACACCCTTGATCAAGACCGCAATTGGGAGGAGCACTGGAGAAGATTGTTTCCCAAGATTACATTGCAAGACATCTTGGACTTTGAGAAGCAGTATAAAGGCTCTGATGAAGAGGTAGAAGACCTGAAGAGGCTGTACCTACAACACGAAGGTGACATGGATCTGATCATGGAGTCTGCGCTTTGCTGCACCTATGAAGATGAGCCACGTATCAAAGACGTACTTCAGCGAGCCATTGATGCTGAAGAGGTGCCGGCCTACAAAGCCTTCACTCACGAGAGTGCCAAGAAGAAGAACAATCGCAAAAGAAAGGCGGAAAAAGAGCATAAGGAGGCGGAGGAAATGCAGAAGGAGATGGGCTTGAACAGTGAGGACAGCCTGGTAGCTATGATAAAGcaaAGACAAAAGTCCAAAGAAAATGGATTCAACTCCCTTATCTCGGATCTGGAGGCTAAATACTGCAAGAAACCAGCAGCAGGAAAGAAGGGCAAGAAAAAGTAGACCGATTCACCAGACTGGGCTGTTCCTACCAAATGTTATAGAATTCATCTTGTACATAGTAATCAAAGGGACACTTCACAATGGATACTGACCCTTTCTTAGGCAACAAAACACCTGTTTAAGGATGCATATCGTGACTAATAACAGGAAGTGGATTAGTGTGACTCTGCTTCACGTGCTCTTGTTCAGACCAGCTTGTGgatcaaatgcaaatgtaagATTTTAAGTGGTTTTTTTGTACACGTTTTCCCGTTTCCTTAGTGTTTAACGTATTGTCGTTCACGATCTTCTGAATATAATAAACTGATTTCAATCGA

Function

symbol description
dnajc9 Predicted to enable heat shock protein binding activity. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; corneal epithelial cell; head; and immature eye. Orthologous to human DNAJC9 (DnaJ heat shock protein family (Hsp40) member C9).

NR:

description
dnaJ homolog subfamily C member 9-like

GO: NA

KEGG:

id description
K09529 DNAJC9; DnaJ homolog subfamily C member 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254160.1 True 1233 mRNA 0.44 6 4167639 4170922

Neighbor

gene id symbol gene type direction distance location
p4ha1a p4ha1a,LOC107684765,LOC107753313,LOC107751705,LOC107560551 coding downstream 13764 4139060 ~ 4153875 (-)
ppp1r9bb ppp1r9bb,LOC107741705,LOC107684769,LOC107675672,LOC107713069,LOC107598037,LOC107576248 coding downstream 60395 4088710 ~ 4107244 (-)
trnal-uag_48 NA coding downstream 87457 4080101 ~ 4080182 (-)
trnal-aag_57 NA coding downstream 88444 4079113 ~ 4079195 (-)
trnal-uag_47 NA coding downstream 88617 4078941 ~ 4079022 (-)
LOC122355129 LOC107560557,LOC107753319,LOC107735415,LOC107694068 coding upstream 61627 4232549 ~ 4237229 (-)
LOC122355389 grid1b,grid1,LOC106578986,LOC106589364 coding upstream 758891 4929813 ~ 5055115 (-)
ccser2b LOC107716476,LOC107653247,LOC107727960,LOC107569472,LOC107674460 coding upstream 1109459 5280381 ~ 5330233 (-)
pelo pelo,LOC107653258,LOC107674509 coding upstream 1189442 5360364 ~ 5367143 (-)
emc9 emc9,LOC107716469,LOC107551848,LOC107674563,LOC107727956,LOC107653261 coding upstream 1244977 5415899 ~ 5419866 (-)
G85435 NA non-coding downstream 206286 3960763 ~ 3961353 (-)
G85389 NA non-coding downstream 446616 3615842 ~ 3721023 (-)
G85372 NA non-coding downstream 792688 3373377 ~ 3374951 (-)
G85355 NA non-coding downstream 1007896 3156816 ~ 3159743 (-)
G85342 NA non-coding downstream 1130055 2950836 ~ 3037584 (-)
G85511 NA non-coding upstream 5068 4175990 ~ 4176266 (-)
G85515 NA non-coding upstream 12660 4183582 ~ 4188337 (-)
G85541 NA non-coding upstream 97081 4268003 ~ 4269616 (-)
G85545 NA non-coding upstream 104415 4275337 ~ 4284935 (-)
G85551 NA non-coding upstream 140531 4311453 ~ 4311904 (-)
G85366 NA other downstream 867951 3258531 ~ 3299688 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other downstream 1064324 3089629 ~ 3103315 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other downstream 1386286 2767908 ~ 2781353 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other downstream 1882587 2173988 ~ 2285052 (-)
ank3b ank3b,LOC107654059,LOC107695539 other downstream 2220227 1814083 ~ 1947412 (-)
kcnh6b LOC107684759,LOC107753307,LOC107573422 other upstream 46482 4217404 ~ 4230039 (-)
LOC122355775 NA other upstream 126945 4297867 ~ 4305215 (-)
trnal-uag_49 NA other upstream 174463 4345385 ~ 4345467 (-)
trnal-uag_50 NA other upstream 176776 4347698 ~ 4347779 (-)
trnal-aag_58 NA other upstream 176940 4347862 ~ 4347942 (-)

Expression


Co-expression Network