casp7 (casp7,LOC107707870,LOC107684033,LOC107581558,LOC107566160)


Basic Information

Item Value
gene id casp7
gene name casp7,LOC107707870,LOC107684033,LOC107581558,LOC107566160
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13436907 ~ 13444732 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254186.1
GACATTCCGGCTGGAGGAAATGGAAGACAAGGAGTTGGGCAGTAGTTTCGTTTTCTCCGTCTAGTAACCTTAAACTTGAAAGAGCAACGAACAAAACAGAAGCTGAtccgacaaaaaaaaaaaaaagtaaAATGGATGCAGAAACCTTCACCACTGAGAGTAAAGAAACAATGGAGGACCAAGACTGTGGAGAAGGAGACACAGTAGATGCAAAACCTGACCGCAAAGGGAGATTTGTGCTTTTTGGAAGTAAGAAGAAGGATGGCAAACTGCAGGAAAAAGAGCAATCTTCTGAAAGCCATTACAGGATTGTTTCACCAACATTCCAGTATAAGATGAGCCACCGGCGTGTCGGCAAGTGcatcatcatcaacaacaaaaattttGATGAAAAGACAGGGATGAATGTACGCAATGGCACAGATCGTGATGCTGGAGAGTTGTTCAAGTGCTTTAAAAACTTGGGCTTTGAAGTTTTCATCTACAACGACCAGACCTGCAGGAATATGGAGCGGCTACTTAAAGAAGTCTCAGAAGAGGACCACAGTGACAGCTCCTGCTTCGCCTGCATCTTGCTGAGCCATGGCGAGGAGGGCATGATTTACGGCACGGATGGAGCAATGCCCATCAAGAGTATGACCTCGCTCTTCAAAGGAGACATGTGCAAGAGCCTCGTGGGCAAGCCCAAGCTCTTTTTCATCCAGGCTTGTCGGGGTTCAGAGTTTGATGATGGTGTACAAACAGACTCAGGACCGCCCAATGACACGATAGAGACAGATGCCAATCCAAGACACAAGATTCCGGTAGAGGCAGACTTCCTGTTTGCTTATTCAACTGTGCCAGGTTACTACTCCTGGAGGAATCCGGGCCGAGGCTCCTGGTTTGTTCAGGCCCTCTGCAACGTTCTTAATGAGTTTGGCAAGCAACTTGAAATCATGCAGATCCTCACTCGGGTCAACTACATGGTGGCCACCAACTTCGAATCCTGGTCAGAGGACCCCCGTTTTAGCGAGAAGAAACAGATACCTTGTGTGGTGTCCATGTTGACTAAAGAGCTCTACTTCAACTGATCTGAGCAGACCATCTTCACATGCTGTGCTCCGTCTGCCCTTTCACAGCATGCGCATTTTCTGGCCAAGGACTTTATAGTAGCACACTTTTAATTTGTTATCTtttaacagtaaatataaaCCAAATTGTTAACCTTTTTTGTCATTGATCCGCCATAAGGAGGGAAACCTCAGTCCAATACTtgagcaaaatatttttacataaatgtaagaAGCATTTTTAAGAGGTGCACATTTCAGGATGGCAGGCAGGAAAGACACATCAGGTGTACAAAGACTGACCACTGACTGACCTCGACACGACTGACTTTACTCGACCAAGCGGTCACAACATTCAGGGATGATCCCAGCTGGAAGTCTGTGTGTGaacgcaatttttttttacgttatgCTGGGCATATAGACACCGAAATGGTATTTCTTTTTGCTACTTCCTGTTCAAATCCACTACTTTTTCAGTGAATGTTCTACTTCAACTTTCTCAGAGTATTCCAGGGAATAGTAATGTCAAATATTATCTGATCTTTGTCCACTGGCGGTGTCAAATATCCATGTTGCTTTGCCAACTGTGAAAGATTTTCTGCCACTTTTACTAGATATAAATTTTTACTAGATTTTTTACTAGATTTTTGATcctaaaaatttgtaaaaataatatataataaaaataaataataaaataggagCTTGGAAAAGACATCCAACACCACACAAAACCTTTGCTGTTCTGTTTTTACAGAACAGGCAACTCGAACATAAATTCAAAGCATATAAATGGCCATTTGTAGCATTTTAGTTTGGTTTGGTTATTCCAGAATGCTCTTCAGAGGAGGTCAAAGAAAGGGCATGAATAGAAATGGAGTGGCATATAGTGAAGTAATGCTGACACCTGCaaggttttgaaagcttttcGTTCATGCCTCACTGGTTAGTTTGTGTtcactgaaaaactgaaattagATCAGCATTCATTCTGTGTATTTTGAGCACACTGTAGCTTCATGCAGTATTTACTGATGGTTTGTACCGAATCCGTCTATAATCTACAGAGGCAGCTATTGTTTTACTGGTGACCATTTTACCCATTTACCACCCATCTGACCAAATGTGCCGTTTCAAACTTGATGGAAGGTTCTGAAGTTTTCAGAGCTTGTTGTCTTTGGTTATGTCCAacagtttttaatttactttttggttctttctgtatttttcattcTCATTGTTCATCCGGATCACACACTGAATCTGCCAGCCTGTGCACCATCTGACCACCACAAATTAAAGGCCCTCTTTTCTTTATGCATAGATTATTAGTGAAGTGCTCCAACTATACTGTTTTGAAATGGaagacaatttttattttttattttatagtacactgtttttacatttaaatgctttacaGTGATAATAGGAatgttaattactttttttttgcacaaatgccctgaaaaaattgtttacattgtCAACATCACATTGTATAAAGTGGGGctgatttttgtttaaattactttaattcaaatgaatgcatttgtaagccttattttattgtattaaaagaCTTTATTgaaa
>XM_043254187.1
ATTCCGGCTGGAGGAAATGGAAGACAAGGAGTTGGGCAGTAGTTTCGTTTTCTCCGTCTAGTAACCTTAAACTTGAAAGAGCAACGAACAAAACAGAAGCTGAtccgacaaaaaaaaaaaaaaTTCTTTCTTCAGAATGGATGCAGAAACCTTCACCACTGAGAGTAAAGAAACAATGGAGGACCAAGACTGTGGAGAAGGAGACACAGTAGATGCAAAACCTGACCGCAAAGGGAGATTTGTGCTTTTTGGAAGTAAGAAGAAGGATGGCAAACTGCAGGAAAAAGAGCAATCTTCTGAAAGCCATTACAGGATTGTTTCACCAACATTCCAGTATAAGATGAGCCACCGGCGTGTCGGCAAGTGcatcatcatcaacaacaaaaattttGATGAAAAGACAGGGATGAATGTACGCAATGGCACAGATCGTGATGCTGGAGAGTTGTTCAAGTGCTTTAAAAACTTGGGCTTTGAAGTTTTCATCTACAACGACCAGACCTGCAGGAATATGGAGCGGCTACTTAAAGAAGTCTCAGAAGAGGACCACAGTGACAGCTCCTGCTTCGCCTGCATCTTGCTGAGCCATGGCGAGGAGGGCATGATTTACGGCACGGATGGAGCAATGCCCATCAAGAGTATGACCTCGCTCTTCAAAGGAGACATGTGCAAGAGCCTCGTGGGCAAGCCCAAGCTCTTTTTCATCCAGGCTTGTCGGGGTTCAGAGTTTGATGATGGTGTACAAACAGACTCAGGACCGCCCAATGACACGATAGAGACAGATGCCAATCCAAGACACAAGATTCCGGTAGAGGCAGACTTCCTGTTTGCTTATTCAACTGTGCCAGGTTACTACTCCTGGAGGAATCCGGGCCGAGGCTCCTGGTTTGTTCAGGCCCTCTGCAACGTTCTTAATGAGTTTGGCAAGCAACTTGAAATCATGCAGATCCTCACTCGGGTCAACTACATGGTGGCCACCAACTTCGAATCCTGGTCAGAGGACCCCCGTTTTAGCGAGAAGAAACAGATACCTTGTGTGGTGTCCATGTTGACTAAAGAGCTCTACTTCAACTGATCTGAGCAGACCATCTTCACATGCTGTGCTCCGTCTGCCCTTTCACAGCATGCGCATTTTCTGGCCAAGGACTTTATAGTAGCACACTTTTAATTTGTTATCTtttaacagtaaatataaaCCAAATTGTTAACCTTTTTTGTCATTGATCCGCCATAAGGAGGGAAACCTCAGTCCAATACTtgagcaaaatatttttacataaatgtaagaAGCATTTTTAAGAGGTGCACATTTCAGGATGGCAGGCAGGAAAGACACATCAGGTGTACAAAGACTGACCACTGACTGACCTCGACACGACTGACTTTACTCGACCAAGCGGTCACAACATTCAGGGATGATCCCAGCTGGAAGTCTGTGTGTGaacgcaatttttttttacgttatgCTGGGCATATAGACACCGAAATGGTATTTCTTTTTGCTACTTCCTGTTCAAATCCACTACTTTTTCAGTGAATGTTCTACTTCAACTTTCTCAGAGTATTCCAGGGAATAGTAATGTCAAATATTATCTGATCTTTGTCCACTGGCGGTGTCAAATATCCATGTTGCTTTGCCAACTGTGAAAGATTTTCTGCCACTTTTACTAGATATAAATTTTTACTAGATTTTTTACTAGATTTTTGATcctaaaaatttgtaaaaataatatataataaaaataaataataaaataggagCTTGGAAAAGACATCCAACACCACACAAAACCTTTGCTGTTCTGTTTTTACAGAACAGGCAACTCGAACATAAATTCAAAGCATATAAATGGCCATTTGTAGCATTTTAGTTTGGTTTGGTTATTCCAGAATGCTCTTCAGAGGAGGTCAAAGAAAGGGCATGAATAGAAATGGAGTGGCATATAGTGAAGTAATGCTGACACCTGCaaggttttgaaagcttttcGTTCATGCCTCACTGGTTAGTTTGTGTtcactgaaaaactgaaattagATCAGCATTCATTCTGTGTATTTTGAGCACACTGTAGCTTCATGCAGTATTTACTGATGGTTTGTACCGAATCCGTCTATAATCTACAGAGGCAGCTATTGTTTTACTGGTGACCATTTTACCCATTTACCACCCATCTGACCAAATGTGCCGTTTCAAACTTGATGGAAGGTTCTGAAGTTTTCAGAGCTTGTTGTCTTTGGTTATGTCCAacagtttttaatttactttttggttctttctgtatttttcattcTCATTGTTCATCCGGATCACACACTGAATCTGCCAGCCTGTGCACCATCTGACCACCACAAATTAAAGGCCCTCTTTTCTTTATGCATAGATTATTAGTGAAGTGCTCCAACTATACTGTTTTGAAATGGaagacaatttttattttttattttatagtacactgtttttacatttaaatgctttacaGTGATAATAGGAatgttaattactttttttttgcacaaatgccctgaaaaaattgtttacattgtCAACATCACATTGTATAAAGTGGGGctgatttttgtttaaattactttaattcaaatgaatgcatttgtaagccttattttattgtattaaaagaCTTTATTgaaa
>XM_043254188.1
TCCGGCTGGAGGAAATGGAAGACAAGGAGTTGGGCAGTAGTTTCGTTTTCTCCGTCTAGTAACCTTAAACTTGAAAGAGCAACGAACAAAACAGAAGCTGAtccgacaaaaaaaaaaaaaAATGGATGCAGAAACCTTCACCACTGAGAGTAAAGAAACAATGGAGGACCAAGACTGTGGAGAAGGAGACACAGTAGATGCAAAACCTGACCGCAAAGGGAGATTTGTGCTTTTTGGAAGTAAGAAGAAGGATGGCAAACTGCAGGAAAAAGAGCAATCTTCTGAAAGCCATTACAGGATTGTTTCACCAACATTCCAGTATAAGATGAGCCACCGGCGTGTCGGCAAGTGcatcatcatcaacaacaaaaattttGATGAAAAGACAGGGATGAATGTACGCAATGGCACAGATCGTGATGCTGGAGAGTTGTTCAAGTGCTTTAAAAACTTGGGCTTTGAAGTTTTCATCTACAACGACCAGACCTGCAGGAATATGGAGCGGCTACTTAAAGAAGTCTCAGAAGAGGACCACAGTGACAGCTCCTGCTTCGCCTGCATCTTGCTGAGCCATGGCGAGGAGGGCATGATTTACGGCACGGATGGAGCAATGCCCATCAAGAGTATGACCTCGCTCTTCAAAGGAGACATGTGCAAGAGCCTCGTGGGCAAGCCCAAGCTCTTTTTCATCCAGGCTTGTCGGGGTTCAGAGTTTGATGATGGTGTACAAACAGACTCAGGACCGCCCAATGACACGATAGAGACAGATGCCAATCCAAGACACAAGATTCCGGTAGAGGCAGACTTCCTGTTTGCTTATTCAACTGTGCCAGGTTACTACTCCTGGAGGAATCCGGGCCGAGGCTCCTGGTTTGTTCAGGCCCTCTGCAACGTTCTTAATGAGTTTGGCAAGCAACTTGAAATCATGCAGATCCTCACTCGGGTCAACTACATGGTGGCCACCAACTTCGAATCCTGGTCAGAGGACCCCCGTTTTAGCGAGAAGAAACAGATACCTTGTGTGGTGTCCATGTTGACTAAAGAGCTCTACTTCAACTGATCTGAGCAGACCATCTTCACATGCTGTGCTCCGTCTGCCCTTTCACAGCATGCGCATTTTCTGGCCAAGGACTTTATAGTAGCACACTTTTAATTTGTTATCTtttaacagtaaatataaaCCAAATTGTTAACCTTTTTTGTCATTGATCCGCCATAAGGAGGGAAACCTCAGTCCAATACTtgagcaaaatatttttacataaatgtaagaAGCATTTTTAAGAGGTGCACATTTCAGGATGGCAGGCAGGAAAGACACATCAGGTGTACAAAGACTGACCACTGACTGACCTCGACACGACTGACTTTACTCGACCAAGCGGTCACAACATTCAGGGATGATCCCAGCTGGAAGTCTGTGTGTGaacgcaatttttttttacgttatgCTGGGCATATAGACACCGAAATGGTATTTCTTTTTGCTACTTCCTGTTCAAATCCACTACTTTTTCAGTGAATGTTCTACTTCAACTTTCTCAGAGTATTCCAGGGAATAGTAATGTCAAATATTATCTGATCTTTGTCCACTGGCGGTGTCAAATATCCATGTTGCTTTGCCAACTGTGAAAGATTTTCTGCCACTTTTACTAGATATAAATTTTTACTAGATTTTTTACTAGATTTTTGATcctaaaaatttgtaaaaataatatataataaaaataaataataaaataggagCTTGGAAAAGACATCCAACACCACACAAAACCTTTGCTGTTCTGTTTTTACAGAACAGGCAACTCGAACATAAATTCAAAGCATATAAATGGCCATTTGTAGCATTTTAGTTTGGTTTGGTTATTCCAGAATGCTCTTCAGAGGAGGTCAAAGAAAGGGCATGAATAGAAATGGAGTGGCATATAGTGAAGTAATGCTGACACCTGCaaggttttgaaagcttttcGTTCATGCCTCACTGGTTAGTTTGTGTtcactgaaaaactgaaattagATCAGCATTCATTCTGTGTATTTTGAGCACACTGTAGCTTCATGCAGTATTTACTGATGGTTTGTACCGAATCCGTCTATAATCTACAGAGGCAGCTATTGTTTTACTGGTGACCATTTTACCCATTTACCACCCATCTGACCAAATGTGCCGTTTCAAACTTGATGGAAGGTTCTGAAGTTTTCAGAGCTTGTTGTCTTTGGTTATGTCCAacagtttttaatttactttttggttctttctgtatttttcattcTCATTGTTCATCCGGATCACACACTGAATCTGCCAGCCTGTGCACCATCTGACCACCACAAATTAAAGGCCCTCTTTTCTTTATGCATAGATTATTAGTGAAGTGCTCCAACTATACTGTTTTGAAATGGaagacaatttttattttttattttatagtacactgtttttacatttaaatgctttacaGTGATAATAGGAatgttaattactttttttttgcacaaatgccctgaaaaaattgtttacattgtCAACATCACATTGTATAAAGTGGGGctgatttttgtttaaattactttaattcaaatgaatgcatttgtaagccttattttattgtattaaaagaCTTTATTgaaa

Function

symbol description
casp7 Predicted to enable cysteine-type endopeptidase activity involved in execution phase of apoptosis. Predicted to be involved in execution phase of apoptosis. Predicted to act upstream of or within proteolysis. Predicted to be active in cytoplasm. Is expressed in intestinal bulb; lens; and pharyngeal arch. Human ortholog(s) of this gene implicated in Alzheimer's disease; breast cancer; colon cancer; and lung non-small cell carcinoma. Orthologous to human CASP7 (caspase 7).

NR:

description
caspase-7

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0006508 proteolysis biological_process
GO:0005737 cytoplasm cellular_component
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG:

id description
K04397 CASP7; caspase 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254186.1 False 2645 mRNA 0.40 7 13436907 13444732
XM_043254187.1 True 2650 mRNA 0.40 7 13436907 13444729
XM_043254188.1 False 2635 mRNA 0.40 7 13436907 13444727

Neighbor

gene id symbol gene type direction distance location
LOC122355076 LOC107566710,LOC107684141,LOC107581554 coding downstream 13949 13418717 ~ 13422958 (-)
LOC122355682 NA coding downstream 18651 13414181 ~ 13418256 (-)
plekhs1.1 LOC107566815,LOC107755416,LOC107702419 coding downstream 26626 13405793 ~ 13410281 (-)
nhlrc2 nhlrc2,LOC107755539,LOC107708141,LOC107702418,LOC107684116 coding downstream 38520 13381644 ~ 13398387 (-)
adrb1 adrb1,LOC107755541,LOC107566002,LOC107702449,LOC107689959,LOC107581665 coding downstream 61419 13372489 ~ 13375488 (-)
crygmx crygmx,LOC107755411,LOC107566847,LOC107684144,LOC107581668 coding upstream 108824 13553556 ~ 13555025 (-)
crygmxl2 crygmxl2,LOC107566855,LOC107708427,LOC107702435,LOC107581669,LOC107684145 coding upstream 110961 13555693 ~ 13557090 (-)
vti1a vti1a,LOC107702459,LOC106589328,LOC107566351 coding upstream 274939 13719671 ~ 13839456 (-)
acsl5 acsl5,LOC107702457,LOC107566323,LOC107722228,LOC107755526,LOC107581566,LOC107684041 coding upstream 401441 13846173 ~ 13854773 (-)
tectb tectb,LOC107755437,LOC107702437,LOC107566341,LOC107581573,LOC107684045,LOC107722201 coding upstream 420094 13864826 ~ 13872555 (-)
G88019 NA non-coding downstream 2782 13433894 ~ 13434125 (-)
G88003 NA non-coding downstream 68587 13365953 ~ 13368320 (-)
G87860 gabrz,LOC108273489,LOC107675029,LOC107754081,LOC107565977 non-coding downstream 629261 12804696 ~ 12807646 (-)
LOC122355629 NA non-coding downstream 798171 12613150 ~ 12638736 (-)
G87746 NA non-coding downstream 949512 12438750 ~ 12487395 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding upstream 13724 13458456 ~ 13459865 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding upstream 15413 13460145 ~ 13461245 (-)
LOC122355666 NA non-coding upstream 264323 13709055 ~ 13712541 (-)
G88146 NA non-coding upstream 379868 13824600 ~ 13894358 (-)
G88205 NA non-coding upstream 548928 13993660 ~ 13994186 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other downstream 4712 13424308 ~ 13432195 (-)
G87845 LOC107675011 other downstream 684229 12751904 ~ 12752678 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other downstream 761435 12649383 ~ 12675472 (-)
G87608 NA other downstream 1485752 11948540 ~ 11951155 (-)
G87569 NA other downstream 1601295 11832879 ~ 11835612 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 78936 13523668 ~ 13540301 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other upstream 164688 13609420 ~ 13691340 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other upstream 528150 13972882 ~ 13976511 (-)
G88250 LOC107702476 other upstream 703315 14148047 ~ 14150005 (-)
G88365 NA other upstream 1096834 14541566 ~ 14643780 (-)

Expression


Co-expression Network