LOC122355682


Basic Information

Item Value
gene id LOC122355682
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13414181 ~ 13418256 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254219.1
GGGAGGGACTTAAACATGAGCTCACACAAAACTGGAAACAACTCCTTTTACCTGTATAGCACTCTGGAAGAGACAAAGCACCTTACGTTTCCTCCAAAACTGCCATCACAACATAAATGTGAGAACTTTTCAGAGGACACCGTTTACTGTGACACAAgAACTAAAGCAAACATCAAGATGTCCAACAAGAAATCATCAAGAACTGCACAGTTTTACAGTGAACCAGCAGTGGAGGATATGTACACTGGATACCTGGTCAAGTCCCCCCCTTTAACTGCACTAACTAAAAACACTAAATCATGGAAGCGTCGCTTCTTTGTGCTCTCCAAGACCACTGAAGACTCCTACCAGCTGACATACCATGTAAACAACGAAAGGAGAGACAAGCCTTTGGGAGAGATAGACATTTCTAAGATCAGCCTGCTGTTCACTGGCCCTGAGACACATCAGAAGTGGGACTGGGTCAAGAAACAATCTAAGGGCTCTCCATCCTCTGTGCTGTTCTTGAAGGTGGAAGACGACACAATAAAACACTCGAGAGAATATTTCCTCATTGGAGAAAACAGTGCTGATGTGGATGGTTGGCTCAATGCATTATTCAAGGCAATGAAATCCCAAAATATACCACAACATACAGACGATACTCAGGAAATGAGATCTAGATCAATGTCTGTACCTGTCAATGGTCCAGAACAAAAAGGTGAACAAAATACTGATGACAGATGGTCAGCATTTGAATTAACTTCTCCACCACAATACGATCATTATGACTATCCTCGCAAGCTCAGCGGAACTCAGCGAATACCAATTCCAATTACTGAGGAAAAATATGACATGGACAGGAAGCAGGATGAGCCTCCAGAGGACAGCAATGAATACATGTCCATGGGATTAGTGCAAAGGGTGAAAGATGACCATCAGGAGGATGACATGGCATGCAAAGAGAAGCTTGAAGTTCACAGGCATTCTAATCAATCTCTTGTTGACTACACTGAAAACGGTGCCTCTACTGAGCCAGACAAAAGtgaaacacacacagatgttaaGAAGGAGACCTGCGTTAGTCAAAATGATCTGAAAAACAATCTGGTCTTGACACAAGAAGGCAGCAAACCATGTGCGTCTGAGTGTCATCAGATTCAGGACTCAAGGGGGGACCTGCCTCCAGACACAATACAAGACAttcagaaatgcataaaaagacTAAGCAGAGATGAGATAAAACTCCTTATTCAGCGACTTCCAGGCCTCACTCTGAACCCTGCCCATGAGGATGCAAAACAAAGTGTGCGAAATCTCTTATCACCACCAAAATAATAGAAGTATTGTACAGGTCAGAGGGTCTGtggaatattaaaatacattcatttactCATACAGGTAGAAAAATAAGCCATTATCAAGTATCAAAAGAGAAGAggcaatcagtttttttttgcctgtacAGTAATCATGAAacaaaaagggaagaaaaagaaagaaaagatgtgTTATTTATACAAGTTACAAAAGtgcctttgtaaaaaaaaaaaaaaaaaaatatatatatatatatatatatatatatatatatatagagagagagagagagagagagagagagagagagagagagcacatttattaatattaagcctaaaatgtgttttaatgtcactactCTGAATAGTTCCACTTTAGCAACcaaatatacttcagtatatcTTTAGTTTGACTTCAGCACTACTAAGTAcaatttagcagactttaaATCTACCAGTTCTGTATACCAAAAACTGCAGGGTATTTTTATCAAGTATTTGTAGTGTActtagcattaaataaatattgacttATTTTTGACTAGAGTGGTAgagtactgtatatattcatttgttttaaatatctaGTATTACTTCGAAACTAGTACAAAAAGTAATCCACAGTAAAGGACTTGATTGTTATTTTACGCATTGTTACATTGTGATGTGTTATTAAACTACCCATTTAACAG
>XM_043254220.1
CTCCTTTTACCTGTATAGCACTCTGGAAGAGACAAAGCACCTTACGTTTCCTCCAAAACTGCCATCACAACATAAATGTGAGAACTTTTCAGAGGACACCGTTTACTGTGACACAAgatatagatatatatcagTGACTTACAGTGGAAACATTTCACATCTATTTTAGAACTAAAGCAAACATCAAGATGTCCAACAAGAAATCATCAAGAACTGCACAGTTTTACAGTGAACCAGCAGTGGAGGATATGTACACTGGATACCTGGTCAAGTCCCCCCCTTTAACTGCACTAACTAAAAACACTAAATCATGGAAGCGTCGCTTCTTTGTGCTCTCCAAGACCACTGAAGACTCCTACCAGCTGACATACCATGTAAACAACGAAAGGAGAGACAAGCCTTTGGGAGAGATAGACATTTCTAAGATCAGCCTGCTGTTCACTGGCCCTGAGACACATCAGAAGTGGGACTGGGTCAAGAAACAATCTAAGGGCTCTCCATCCTCTGTGCTGTTCTTGAAGGTGGAAGACGACACAATAAAACACTCGAGAGAATATTTCCTCATTGGAGAAAACAGTGCTGATGTGGATGGTTGGCTCAATGCATTATTCAAGGCAATGAAATCCCAAAATATACCACAACATACAGACGATACTCAGGAAATGAGATCTAGATCAATGTCTGTACCTGTCAATGGTCCAGAACAAAAAGGTGAACAAAATACTGATGACAGATGGTCAGCATTTGAATTAACTTCTCCACCACAATACGATCATTATGACTATCCTCGCAAGCTCAGCGGAACTCAGCGAATACCAATTCCAATTACTGAGGAAAAATATGACATGGACAGGAAGCAGGATGAGCCTCCAGAGGACAGCAATGAATACATGTCCATGGGATTAGTGCAAAGGGTGAAAGATGACCATCAGGAGGATGACATGGCATGCAAAGAGAAGCTTGAAGTTCACAGGCATTCTAATCAATCTCTTGTTGACTACACTGAAAACGGTGCCTCTACTGAGCCAGACAAAAGtgaaacacacacagatgttaaGAAGGAGACCTGCGTTAGTCAAAATGATCTGAAAAACAATCTGGTCTTGACACAAGAAGGCAGCAAACCATGTGCGTCTGAGTGTCATCAGATTCAGGACTCAAGGGGGGACCTGCCTCCAGACACAATACAAGACAttcagaaatgcataaaaagacTAAGCAGAGATGAGATAAAACTCCTTATTCAGCGACTTCCAGGCCTCACTCTGAACCCTGCCCATGAGGATGCAAAACAAAGTGTGCGAAATCTCTTATCACCACCAAAATAATAGAAGTATTGTACAGGTCAGAGGGTCTGtggaatattaaaatacattcatttactCATACAGGTAGAAAAATAAGCCATTATCAAGTATCAAAAGAGAAGAggcaatcagtttttttttgcctgtacAGTAATCATGAAacaaaaagggaagaaaaagaaagaaaagatgtgTTATTTATACAAGTTACAAAAGtgcctttgtaaaaaaaaaaaaaaaaaaatatatatatatatatatatatatatatatatatatagagagagagagagagagagagagagagagagagagagagcacatttattaatattaagcctaaaatgtgttttaatgtcactactCTGAATAGTTCCACTTTAGCAACcaaatatacttcagtatatcTTTAGTTTGACTTCAGCACTACTAAGTAcaatttagcagactttaaATCTACCAGTTCTGTATACCAAAAACTGCAGGGTATTTTTATCAAGTATTTGTAGTGTActtagcattaaataaatattgacttATTTTTGACTAGAGTGGTAgagtactgtatatattcatttgttttaaatatctaGTATTACTTCGAAACTAGTACAAAAAGTAATCCACAGTAAAGGACTTGATTGTTATTTTACGCATTGTTACATTGTGATGTGTTATTAAACTACCCATTTAACAG
>XM_043254221.1
CTGGAAGAGACAAAGCACCTTACGTTTCCTCCAAAACTGCCATCACAACATAAATGTGAGAACTTTTCAGAGGACACCGTTTACTGTGACACAAgAACTAAAGCAAACATCAAGATGTCCAACAAGAAATCATAACTGCACAGTTTTACAGTGAACCAGCAGTGGAGGATATGTACACTGGATACCTGGTCAAGTCCCCCCCTTTAACTGCACTAACTAAAAACACTAAATCATGGAAGCGTCGCTTCTTTGTGCTCTCCAAGACCACTGAAGACTCCTACCAGCTGACATACCATGTAAACAACGAAAGGAGAGACAAGCCTTTGGGAGAGATAGACATTTCTAAGATCAGCCTGCTGTTCACTGGCCCTGAGACACATCAGAAGTGGGACTGGGTCAAGAAACAATCTAAGGGCTCTCCATCCTCTGTGCTGTTCTTGAAGGTGGAAGACGACACAATAAAACACTCGAGAGAATATTTCCTCATTGGAGAAAACAGTGCTGATGTGGATGGTTGGCTCAATGCATTATTCAAGGCAATGAAATCCCAAAATATACCACAACATACAGACGATACTCAGGAAATGAGATCTAGATCAATGTCTGTACCTGTCAATGGTCCAGAACAAAAAGGTGAACAAAATACTGATGACAGATGGTCAGCATTTGAATTAACTTCTCCACCACAATACGATCATTATGACTATCCTCGCAAGCTCAGCGGAACTCAGCGAATACCAATTCCAATTACTGAGGAAAAATATGACATGGACAGGAAGCAGGATGAGCCTCCAGAGGACAGCAATGAATACATGTCCATGGGATTAGTGCAAAGGGTGAAAGATGACCATCAGGAGGATGACATGGCATGCAAAGAGAAGCTTGAAGTTCACAGGCATTCTAATCAATCTCTTGTTGACTACACTGAAAACGGTGCCTCTACTGAGCCAGACAAAAGtgaaacacacacagatgttaaGAAGGAGACCTGCGTTAGTCAAAATGATCTGAAAAACAATCTGGTCTTGACACAAGAAGGCAGCAAACCATGTGCGTCTGAGTGTCATCAGATTCAGGACTCAAGGGGGGACCTGCCTCCAGACACAATACAAGACAttcagaaatgcataaaaagacTAAGCAGAGATGAGATAAAACTCCTTATTCAGCGACTTCCAGGCCTCACTCTGAACCCTGCCCATGAGGATGCAAAACAAAGTGTGCGAAATCTCTTATCACCACCAAAATAATAGAAGTATTGTACAGGTCAGAGGGTCTGtggaatattaaaatacattcatttactCATACAGGTAGAAAAATAAGCCATTATCAAGTATCAAAAGAGAAGAggcaatcagtttttttttgcctgtacAGTAATCATGAAacaaaaagggaagaaaaagaaagaaaagatgtgTTATTTATACAAGTTACAAAAGtgcctttgtaaaaaaaaaaaaaaaaaaatatatatatatatatatatatatatatatatatatagagagagagagagagagagagagagagagagagagagagcacatttattaatattaagcctaaaatgtgttttaatgtcactactCTGAATAGTTCCACTTTAGCAACcaaatatacttcagtatatcTTTAGTTTGACTTCAGCACTACTAAGTAcaatttagcagactttaaATCTACCAGTTCTGTATACCAAAAACTGCAGGGTATTTTTATCAAGTATTTGTAGTGTActtagcattaaataaatattgacttATTTTTGACTAGAGTGGTAgagtactgtatatattcatttgttttaaatatctaGTATTACTTCGAAACTAGTACAAAAAGTAATCCACAGTAAAGGACTTGATTGTTATTTTACGCATTGTTACATTGTGATGTGTTATTAAACTACCCATTTAACAG

Function

GO:

id name namespace
GO:0005543 phospholipid binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254219.1 False 1993 mRNA 0.38 13 13414181 13418256
XM_043254220.1 True 2004 mRNA 0.38 13 13414181 13418215
XM_043254221.1 False 1926 mRNA 0.38 13 13414181 13418193

Neighbor

gene id symbol gene type direction distance location
plekhs1.1 LOC107566815,LOC107755416,LOC107702419 coding downstream 3900 13405793 ~ 13410281 (-)
nhlrc2 nhlrc2,LOC107755539,LOC107708141,LOC107702418,LOC107684116 coding downstream 15794 13381644 ~ 13398387 (-)
adrb1 adrb1,LOC107755541,LOC107566002,LOC107702449,LOC107689959,LOC107581665 coding downstream 38693 13372489 ~ 13375488 (-)
tdrd1 LOC107702448,LOC107755540,LOC107566104,LOC107581549,LOC107708149,LOC107689961 coding downstream 79389 13325153 ~ 13334792 (-)
vwa2 vwa2,LOC107755546,LOC107702446,LOC107707947 coding downstream 89486 13307621 ~ 13324695 (-)
LOC122355076 LOC107566710,LOC107684141,LOC107581554 coding upstream 461 13418717 ~ 13422958 (-)
casp7 casp7,LOC107707870,LOC107684033,LOC107581558,LOC107566160 coding upstream 18651 13436907 ~ 13444732 (-)
crygmx crygmx,LOC107755411,LOC107566847,LOC107684144,LOC107581668 coding upstream 135300 13553556 ~ 13555025 (-)
crygmxl2 crygmxl2,LOC107566855,LOC107708427,LOC107702435,LOC107581669,LOC107684145 coding upstream 137437 13555693 ~ 13557090 (-)
vti1a vti1a,LOC107702459,LOC106589328,LOC107566351 coding upstream 301415 13719671 ~ 13839456 (-)
G88003 NA non-coding downstream 45861 13365953 ~ 13368320 (-)
G87860 gabrz,LOC108273489,LOC107675029,LOC107754081,LOC107565977 non-coding downstream 606535 12804696 ~ 12807646 (-)
LOC122355629 NA non-coding downstream 775445 12613150 ~ 12638736 (-)
G87746 NA non-coding downstream 926786 12438750 ~ 12487395 (-)
G87695 LOC107669482,LOC107552775 non-coding downstream 1067115 12344898 ~ 12347066 (-)
G88019 NA non-coding upstream 15638 13433894 ~ 13434125 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding upstream 40200 13458456 ~ 13459865 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding upstream 41889 13460145 ~ 13461245 (-)
LOC122355666 NA non-coding upstream 290799 13709055 ~ 13712541 (-)
G88146 NA non-coding upstream 406344 13824600 ~ 13894358 (-)
G87845 LOC107675011 other downstream 661503 12751904 ~ 12752678 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other downstream 738709 12649383 ~ 12675472 (-)
G87608 NA other downstream 1463026 11948540 ~ 11951155 (-)
G87569 NA other downstream 1578569 11832879 ~ 11835612 (-)
G87489 NA other downstream 2091578 11321423 ~ 11322603 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 6052 13424308 ~ 13432195 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 105412 13523668 ~ 13540301 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other upstream 191164 13609420 ~ 13691340 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other upstream 554626 13972882 ~ 13976511 (-)
G88250 LOC107702476 other upstream 729791 14148047 ~ 14150005 (-)

Expression


Co-expression Network