G2776


Basic Information

Item Value
gene id G2776
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4455992 ~ 4456314 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU3088
ATGTTCGGGGCTCAGACTCGCTCACCCAGTTTAAATCTAGATTAAAGACACATCTCTTTAGCCAAGCATTCACATAATCCATCTCATATCAGATAAATTGCACATGACTATCTTTGCTTAATGTTATGAACAGCAGCTATGCTAATTATTCTCCATTTGCTTTTCCGGGCGTCCCGAGGTGACTAGAGAGTACATCAGTTTCAGTTTGGATCCAGCCTCTTAAGAAGACCTCAGATGACTAAAACTTTGGAAGAGACGGCGCCAACTCCTGCGAGGACTTCAGAAGATGCAACATCTGGATCAACACGCACATTCGCAAATTT
>TU3090
TCTTTAGCCAAGCATTCACATAATCCATCTCATATCAGATAAATTGCACATGACTATCTTTGCTTAATGTTATGAACAGCAGCTATGCTAATTATTCTCCATTTGCTTTTCCGGGCGTCCCGAGGTGACTAGAGAGTACATCAGTTTCAGTTTGGATCCAGCCTCTTAAGAAGACCTCAGATGACTAAAACTTTGGAAGAGACGGCGCCAACTCCTGCGAGGACTTCAGAAGATGCAACATCTGGATCAACACGCACATTCGCAAATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3088 False 323 lncRNA 0.25 1 4455992 4456314
TU3090 True 269 lncRNA 0.46 1 4456046 4456314

Neighbor

gene id symbol gene type direction distance location
CI01000000_04451252_04452143 NA coding upstream 2981 4451130 ~ 4453011 (+)
CI01000000_04368179_04392483 NA coding upstream 63002 4367839 ~ 4392990 (+)
CI01000000_04355381_04356090 NA coding upstream 99849 4355381 ~ 4356143 (+)
CI01000000_04225109_04225608 NA coding upstream 229376 4225109 ~ 4226616 (+)
CI01000000_04165348_04197615 NA coding upstream 258171 4165285 ~ 4197821 (+)
CI01000000_04462428_04462831 NA coding downstream 6114 4462428 ~ 4463112 (+)
CI01000000_04547587_04562715 RXFP1 coding downstream 91273 4547587 ~ 4562837 (+)
CI01000000_04576065_04586515 ETFDH coding downstream 119751 4576065 ~ 4586881 (+)
CI01000000_04661351_04667059 NA coding downstream 205037 4661351 ~ 4667087 (+)
CI01000000_04698746_04717749 RAPGEF2 coding downstream 241727 4698041 ~ 4718908 (+)
G2755 NA non-coding upstream 30254 4425395 ~ 4425738 (+)
G2752 NA non-coding upstream 32038 4423716 ~ 4423954 (+)
G2427 NA non-coding upstream 254591 4201178 ~ 4201401 (+)
G2420 NA non-coding upstream 263638 4192124 ~ 4192354 (+)
CI01000000_04138020_04144928 NA non-coding upstream 308169 4138020 ~ 4147823 (+)
G2780 NA non-coding downstream 7225 4463539 ~ 4463768 (+)
G2792 NA non-coding downstream 20243 4476557 ~ 4476765 (+)
G2793 NA non-coding downstream 22671 4478985 ~ 4479194 (+)
G2795 NA non-coding downstream 28269 4484583 ~ 4484815 (+)
G2845 NA non-coding downstream 113417 4569731 ~ 4569937 (+)
G2774 NA other upstream 1760 4453778 ~ 4454232 (+)
G579 NA other upstream 2547184 1767917 ~ 1908808 (+)
G435 NA other upstream 3023138 1425121 ~ 1432854 (+)
G350 NA other upstream 3779055 671842 ~ 676937 (+)
G252 NA other upstream 3948920 503209 ~ 507072 (+)
G2850 NA other downstream 269672 4725986 ~ 4726482 (+)
G6811 NA other downstream 5748517 10204831 ~ 10321679 (+)
G6820 NA other downstream 5970909 10427223 ~ 10433018 (+)
G7018 NA other downstream 6522175 10978489 ~ 10980872 (+)
G7153 NA other downstream 6788143 11244457 ~ 11245633 (+)

Expression


Co-expression Network