LOC122355756 (LOC107660458)


Basic Information

Item Value
gene id LOC122355756
gene name LOC107660458
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 193733 ~ 208068 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254320.1
agagagagctTGCATGCtaatatgcaaatttattcagTATTTGGAGCACATATTTACATTCTTCACTGAATGTGATGTCTTTCTATGTAACAGATTTGCACAGAAAACAGCTGTGAAGATCAGATGCAAAATCTAACATTTAAGAGAGACAACTAAAACAGATTGCATTACAATGGAATTGCTGTATCTGATGCTGATATTTATCATCAGTGACATGAGAAAAGCTGTAAAAGGCCAGCGCTGTGGGGTTTCTTCACTCAGTGCTGGTGTTGTAGGAGGTGAGGATGTAGGGAACAGGCCTTGGCTGGTCCGTCTACACATTTCCGGCCGTGGCTTCTGCGGAGGTTCCCTCATCAGCCGTGAATGGGTGCTCACTGCAGCTCACTGCACTGACTATCTATCCTCAGACTCTGAACTGAACTATACCGTTTACCTGGGTAGGCAGAGCCAAAACACTTCGGTGTCTAACCCACACGAGGTGAGTCGAGGAATCCGATCCATCGTTCCACATCCGGACTACGACCCCTCACAGTGTGTTAACGACATCGCCTTGCTGAGACTGAGCGAGCCAGTGAACTTCACGAACTACATTAGCCCCATCTGCCTCGCTGCGAACGACAGCGTCTTTTACAACTGCACCACCTGCCGGTCCACCAGATGGGGAGAAACCGGCTTTTTAGACTCTCAGCACACTTATGGAACTCTGCAGGAAGTGAAGATGAGAATAGTTGGGAATAAGGAGTGTGACTGCAGGGTTATGGACGTAACAATCACTCCGACAATGATCTGTGCCGAAGAAGAGGCTGGAGAAAAAACATGTTATAGAGATTCTGGTGGTCCATTACAGTGTGAGCAGGAATCTGTCTGGATCTTAGCTGGTGTCACTAATCCTTCTTCTTGTGGCACTGGAAATGCACCTGACAGCTATGCTAGAGTATCCAGTTACCAAAACTGGATTATGAAGAATGTTAATGGAACAGACATTGGCTTTGTGACTTTTACATCTGATGGTGAAGACAAGGACAGCAGCTTTCTGTGTAGTCACGGAAGATATAGAGACATCATCGCTCCACTTTGGACAGACATGGACAACACTGTCAATGGAACAATCTCCTATCGTCAGGTCACCAGTGGTGGACTCTTACTAGCAGCTTCAAACAACATAAACCAGTATTTTCCCAATCTGAACTTCACTGCCTCATGGCTGTTCATTGCCACTTGGGATAAAGTACCCTACTATGACGACCCACAATCGGTCAACAATAATGGATATTTGACGTTTGAACCATTTTATGAAAGCCTCCCCAAGGCTTTCCCTGCAAACTCTACTAGAGATATTATAGCTCCACTCTGGGCAAAGTTGGACTGTAGCGTCAGAGGAAGCATCTCCTACAGAATTGTAACTCGGGGCCATATTCTGGACCGGGCGAGAAATGATATCAAACAGTATTTCCCTCAGTTTGGGTTCTCAGTTTATACGGTGTTCATTGCGACTTGGAATTGGATGCCCTACTTGAACAGCTCCACGACGGCTGGCTATGACACAATAAACTCAACAGATTATTTTTCGATCCCTGTGCCTGATGAAAGTAAGCTCTTCAACTCCAGTAATGTCAATGTCCCGGGACGCTGGGTGTTTCGTGTTGACGGTGGACCTGAGGAGGGAGTATTCTACCCATATGGAGATGAAGAGGATGAGATGTGTCCTCAGTCAGATGATGGAAGTTCTCCACCGATTCCTCTTCTGCAGCCGTTTGTGTACTTTGGCCGAgtatatgacaaaatatttgCTGGCTATGACACAATAAACTCAACAGATTATTTTTCAATCCCTGTGCCTGATGAAAGTAAGCTGTTCAACTCCAGTAATGTCAATGTCCCGGGACGCTGGGTGTTTCGTGTTGATGGTGGACCTGAGGAGGgaGTATTCTACCCATATGGAGATGAAGAGGATGAGATGTGTCCTCGGTCAGATGATGGAAGTTCTCCACCGATTCCTCTTCTGCAGCCGTTTGTATACTTTGGCCGAgtatatgacaaaatatttCAGTGGCACATCAGAAGTTATTGGGTAAAAGCATCATTGTTTTTTGTGTCAGCTTCCTCAGATGATGTTTCTAGTGCTCTGATGTGTGGAATAACCCCAGTTACCACCAGCAGCAGGACAGTAGGAGGTCAGAACGCTTCAGCCGGACGCTGGCCCTGGCAGGCTAGTCTTCTTCTGCTAAGCAGACACATCTGTGGAGGTTCTCTCATCAACAAAGAATGGGTGCTGTCTGCTGCACGTTGTGTTCTTGGGTATCCCACCTCTTTTTTCACTGTGGTTTTGGGGCGACAGATCCAGGGAGTCTTCAGCCCCAATGAAGTGTTCAGATATGTGAGGAGAATCATCAAACATCCCAGTTACAACAATTTGACAAACGAAAACGATATCGCTCTTCTCAAATTGAGGACACCCGTCACCTTCACCGACTACATCAGACCCGTGTGTCTAGCAGCTTATAACAGTGTGTTCAACAGCGGCACAGACAGCTGGATCACTGGATGGGGAAACATTAGTGAAGGAGTGGCTCCTCCGTCCCGTCAAGTTCTTCAGGAAGTAGAGGTTCCTGTAATTGGTAACAGACAGTGCAACTGTCTCTATGGAGTTGGAAATATAACAGACAACATGATCTGTGCTGGTGTCCTGGAAGGAGGCAAAGATTCGTGTCAGAGGGACTTAGGAGGTCCGATGGTGAGCATGCAGAGCTCTGTATGGGTTCAGTCTGGTATTGTTAGCTTTGGGACTGTCTGTGCTGGACCTGAACTTCCTGGTGTGTACACCAGAGTATCACGCTATCAGGAATGGATCAGCTCTTTTGTGTGCAGTGATCCTCCAGGTTTTGTGCAGTTTACCTCCGCTGAAGCTGATCCTGACTACAGTTACAGCTGTCCGGgtcttcctcctccttcctcATTAATAGGTTCAGTATCTAACATTAGATCTTCTGCAACAACTCCTACTCAAAATTCTTCGCTATCATATTTGCTGTTACTTTTAGCAATACTTAATTTTATGTGTAAAGATACATTTGGGGCAAATACCTTTAATCATCAGGAATATATCAAATATGACAAGAAGAAATAATACAATATGTTTCAAATATAACAATGAtctctgaatgatcatgtgccactaaatatatatatatatatatacatacactatattgccaaaagtattcaaaaGTATAGcagcaatatagtgtatatatagacactattatatgtgtatattaattagGGGTGGCATGATACATAGTTGTCACGGTACAGGTCAAGGTTCGATACAAcaggagaaaaacaacaaatataccATGCACGgttacttcatttattttgaacagatagtagtataaattacattttttccctcCTAGATgtgaaaacaataaacattaggctatattacattacaat

Function

NR:

description
PREDICTED: uncharacterized protein LOC107660458

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254320.1 True 3459 mRNA 0.44 17 193733 208068

Neighbor

gene id symbol gene type direction distance location
LOC122355205 dlx4b,LOC107739765,LOC107664616,LOC107708902,LOC107557342 coding downstream 17030 171762 ~ 176703 (-)
LOC122355848 akt2l,akt2,LOC107722100,LOC107671613,LOC105023568,LOC107711004 coding downstream 82607 103795 ~ 111126 (-)
LOC122355847 LOC107690849,LOC107671610,LOC107710396,LOC107565533,LOC107575145,LOC107575144 coding downstream 130690 44012 ~ 63043 (-)
LOC122355212 LOC107561990,LOC107575498 coding upstream 10146 218214 ~ 222873 (-)
LOC122355214 LOC107561990,LOC107575498 coding upstream 15810 223878 ~ 228330 (-)
LOC122355215 vkorc1,LOC107719575,LOC107598672,LOC107654009,LOC108413442 coding upstream 25198 233266 ~ 234678 (-)
LOC122355213 zgc:92313,LOC107719557,LOC107708960,LOC107664633,LOC107598673,LOC107653945,LOC107557352 coding upstream 34762 242830 ~ 247565 (-)
LOC122355757 LOC107557351,LOC107719532,LOC107654013,LOC107708952,LOC107598581,LOC107664606,LOC107708954 coding upstream 64198 272266 ~ 290655 (-)
G84487 NA non-coding downstream 52652 140100 ~ 141081 (-)
G84492 LOC107565537,LOC107671635,LOC107690840 non-coding downstream 104159 88055 ~ 89574 (-)
LOC122355197 NA non-coding upstream 174504 382572 ~ 385022 (-)
LOC122355423 NA non-coding upstream 177821 385889 ~ 386457 (-)
G84547 NA non-coding upstream 269955 478023 ~ 478431 (-)
G84654 NA non-coding upstream 401999 610067 ~ 611847 (-)
G84666 slc35g1,si:ch211-197g18.2,LOC107598601,LOC107654036,LOC107664634,LOC107664593,LOC107557359,LOC107708939 non-coding upstream 452021 660089 ~ 663746 (-)
LOC122355191 dusp3b,LOC107753093,LOC107590411,LOC107688089,LOC107709997 other downstream 22438 168048 ~ 171295 (-)
G84486 emsy,LOC107671635,LOC107690840,LOC107722098,LOC107565537,LOC107747365 other downstream 63748 78617 ~ 129985 (-)
G84485 vaspa,LOC107722097,LOC107565535,LOC107710395,LOC107671612,LOC107575450 other downstream 70966 12045 ~ 122767 (-)
G84521 NA other upstream 111262 319330 ~ 321260 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other upstream 132205 340273 ~ 360482 (-)
LOC122355759 NA other upstream 276370 484438 ~ 490379 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other upstream 288896 496964 ~ 500219 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other upstream 335178 543246 ~ 552443 (-)

Expression


Co-expression Network