LOC122355758


Basic Information

Item Value
gene id LOC122355758
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 469843 ~ 477539 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254322.1
ggcaccacttcttctgaagctactaccctgggcaccacttcttctgaaggcacctctactgtggaaagtacaacgtTGGGTACCACTTCCTCTGAAGCTACAACACAGGGCACCACTtattccgaagctactacccttggcaccacttcgtctgaagctactacccttggcaccacgtcttccgaagctactacccttggcacctccaCTGTAGAAAGTACAAGCTTGGgtaccacttcttctgaagctactacccttggcaccacgtcttctgaagctactacccttggcaccacgtcttctgaagctgctactactcttggcaccacttcttctgaagctactacccttggcacctctactacaaccttgggcaccacgtcttccgaagctactaccctgggcaccacgtctgctactacccttggcaccacttcttccgaagctactacccttggcaccacgtcttccgaagctactacccttggcaccacttcttctgaagctagtacccttggcacctctactgtggaaagtacaacttTGGGCACCACATCGTCTGAAGCTACAAcacagggcaccacttcttctgaagctactacccagggcaccacttcttccgaagctaccaCCCTTGGcgccacttcttccgaagctactacccttggcgcCACTTCGTCTGAAGCTACTTCCCTTGGcgccacttcttccgaagctactacccttggcacctccactgtggaaagtacaaccttgggcaccacttcttctgaagctactaccacaaccttgggcaccacttcttctgaagctactacccttggcacctctactgtgaaaagtacaaccttgggcaccacttcttccgaagctactacccttggcaccacttcttccgaagctactacccttggcaccacgtcttccgaagctcCTACCCTTGGCgccacgtcttccgaagctactacccttggcaccacgtcttctgaagctactacccttggcaccacttcttctgaagctactacccttggcacttctactgtggaaagtacaaccttgggcaccacttcttccgaagct

Function

GO:

id name namespace
GO:1903047 mitotic cell cycle process biological_process
GO:0006259 DNA metabolic process biological_process
GO:0099080 supramolecular complex cellular_component
GO:0099081 supramolecular polymer cellular_component
GO:0044430 obsolete cytoskeletal part cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0005874 microtubule cellular_component
GO:0015630 microtubule cytoskeleton cellular_component
GO:0099512 supramolecular fiber cellular_component
GO:0099513 polymeric cytoskeletal fiber cellular_component
GO:0043228 non-membrane-bounded organelle cellular_component
GO:0043232 intracellular non-membrane-bounded organelle cellular_component

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254322.1 True 1083 mRNA 0.53 7 469843 477539

Neighbor

gene id symbol gene type direction distance location
LOC122355175 NA coding downstream 25018 439870 ~ 444825 (-)
mapta LOC107598589,LOC107732173,LOC107654024,LOC107664605 coding downstream 35567 407356 ~ 434276 (-)
brsk1a si:ch211-255p10.4,LOC107598587,LOC107732176,LOC108441159,LOC108273514,LOC107654020,LOC107557374,LOC103033508,LOC108427376,LOC107658484,LOC107548343 coding downstream 88676 363606 ~ 381167 (-)
irf3 NA coding downstream 130850 333577 ~ 338993 (-)
LOC122355359 LOC107654014,LOC107664598,LOC107557378,LOC107708888 coding downstream 151314 298608 ~ 318529 (-)
rbp4 rbp4,LOC107743953,LOC107664626,LOC107598599,LOC107557363,LOC107653948 coding upstream 146372 623911 ~ 626522 (-)
fra10ac1 fra10ac1,LOC107664625,LOC107654038,LOC107708941,LOC107557362,LOC107743956 coding upstream 163332 640871 ~ 650188 (-)
noc3l noc3l,LOC107664623,LOC107654039,LOC107743960 coding upstream 259109 736648 ~ 745103 (-)
tbc1d12b LOC107743959,LOC107654040,LOC107708937,LOC107664632 coding upstream 268728 746267 ~ 762604 (-)
LOC122355750 LOC107654041 coding upstream 300962 778501 ~ 797724 (-)
LOC122355423 NA non-coding downstream 83386 385889 ~ 386457 (-)
LOC122355197 NA non-coding downstream 84821 382572 ~ 385022 (-)
LOC122355220 LOC107561990,LOC107660458 non-coding downstream 270976 197400 ~ 198867 (-)
LOC122355221 LOC107561990,LOC107660458 non-coding downstream 272450 196901 ~ 197393 (-)
G84487 NA non-coding downstream 328762 140100 ~ 141081 (-)
G84547 NA non-coding upstream 484 478023 ~ 478431 (-)
G84654 NA non-coding upstream 132528 610067 ~ 611847 (-)
G84666 slc35g1,si:ch211-197g18.2,LOC107598601,LOC107654036,LOC107664634,LOC107664593,LOC107557359,LOC107708939 non-coding upstream 182550 660089 ~ 663746 (-)
G84700 NA non-coding upstream 282386 759925 ~ 789003 (-)
LOC122355303 NA non-coding upstream 289115 766654 ~ 769898 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other downstream 109361 340273 ~ 360482 (-)
G84521 NA other downstream 148583 319330 ~ 321260 (-)
LOC122355191 dusp3b,LOC107753093,LOC107590411,LOC107688089,LOC107709997 other downstream 298548 168048 ~ 171295 (-)
G84486 emsy,LOC107671635,LOC107690840,LOC107722098,LOC107565537,LOC107747365 other downstream 339858 78617 ~ 129985 (-)
LOC122355759 NA other upstream 6899 484438 ~ 490379 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other upstream 19425 496964 ~ 500219 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other upstream 65707 543246 ~ 552443 (-)
dlx4b dlx4b,LOC107739765,LOC107557342,LOC107708902 other upstream 412171 889710 ~ 897517 (-)
ank3b ank3b,LOC107654059,LOC107695539 other upstream 1336544 1814083 ~ 1947412 (-)

Expression


Co-expression Network