LOC122355804 (nrg3b,LOC107566665,LOC107573948,LOC107678479,LOC107689960)


Basic Information

Item Value
gene id LOC122355804
gene name nrg3b,LOC107566665,LOC107573948,LOC107678479,LOC107689960
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 10138438 ~ 10144729 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254356.1
CTCCTCTTCTGCTTTCTCTCTGTCGCACATTCTATcgcttgctctctctctctctcttgtttccgctctctctctctctccctctgctTGCTTCTCTCACACTCTGTGTGCCTGTGTTTCTGCCAAGGTCTGAGTCTTTCAGTGTGGGAATGTAGCAAGCTCAGAGACAGGACTGCCTTTGAATTCTGGTGCAATGACGGATGCAGGGCAGAGGCTCGGATGTACACTGACAGAGCGAGAGAACTAAGGGCAGGGATTGGGAAAAGGATCTGATGGATTTAACCCTCGCAGCCGTCTCTGCCTGATATCAGAGTACATCATTCTCCCCCGCTCCGCTGTTCTCTCCTGTGGGGTGGATTACCGGCTGCCCGTGTCCACTGATGCACCGCTGTAGAGACTAGAGGGAAGATCCAAGCTGCGTAGCCAGAGGCGAAGTGCCGTGtcgggggagagagagagacgcagaGCTGTCCCTTGAGTGGAGCTGTGCTTCTGCCACTACCTGAgcttctccacacacacacacacatatatatacacacacacactcacacaaacacatacagagGCAGGGCTGCGCCAGCCGCGACGACCGATGCGTTAATGCAGCTGTGAGAGAAGATCTGCAGCAGGGAGCTGCCCTCGCTTAAACACTCACGGATTTATAAGGAAAATTTGACTCCGGGAAGAACACCGACGGATCcgcaaaacttaatttttgttctatttttcaTCTCTATCTATGGAGCATCTTGGGAATTACCTTCGGTTCTAAGGAAGCTGAACTAAACAGAGGCTCATTCCCAAAACCCGCTCTTCTCCCAAACCTAGTCCTCTTTTATTCCTgatcgagtgtgtgtgtgtgtgtgtttgtttgtgtatgtgtgcgtgtgtacgtGACTATTGGTGTCTTTGAGCTTTAGggtttgtttattgtatttgtaaGGAATTACTCTTTATGTGTtcgtatataaatatatatatatatttatatatcggCTGATGTCTGCTGTGCTATTCATATGAGTAGTCGGTATTGCATGTATCTGTATCTGTGGAAGAgtgttaaatgaatattaatgagatgCCCAGTTTTGGCTCCCTCCCCAGCCCCCTCCACTGCTTGCACTACTTCCTGGCTGGGCCCTGAACCCCAGAAGCATGAGTGAGAGAACGGCACTAGGGGCCACCATGGAGACCATGACCCTGGAGGAGCCCGGGGGTGAACAAGCCTCTCCCCGGGCCCCAGGGCCCCTCCGCTGTGGCCCCTGTGCGGTGTGGCCCCGCCAGCAGACCTGGCTTTGCGTTGTGCCCCTACTGATGGGctttgtgggcctaggcctcAGCCTGATGCTTCTTAAATGGATTGTGGTGGGCTCAGTGCAGGATTACGTCCCGACTGACCTGGTGGATGCCAATCGCATCGGACAGGACCCGATTTTCCTATCTAAACCCAGTGCCCTGCCGAAGGGTTCCGATGGCTCCACGTCTACCACTTCCTCCCCACCCTCAGCGGCTCCGGGTTCAGCGACCCGAGCGGCTGAGGGTACAGGTACAGTGCAAAGGACTCGGATTGGGCAGTCCTCAAACCACACGGCCAGTAGCAGTAGCAGCAGTGGAGGAGGTGGCGGGGCCTTAGGGGGAGGCTCGGGAAACAGAGCTCCACACCTGCATAACAGAGTGGGGACGCGATTGACCAACACCACCACCGCCACCCGAGCCACCAATCCTGCCCCACCAGGAGGAAAGGAGGTGACCCCACGCAGCACCACTGTTCGAAAACCCAATGGGGATGGTGGGAGCCGAAATGCATCCCCTTCTGCACGGGCTGGGCCACCGAGTACGACCACCACGAGCACGACGACCACTACGATTATGACGAGCACAAGCACCACGCAAGCGGCCCAAACGACCTCCACCCTCGCGTCGCCTTCCAAACCTGGTCAACGCTGGAACCATGGCCGCTCCTCCAAGGGCCCTTCAACCAAGCCTACTCGGCCACACCAACGCTTCAGGACACTTGGTCTCTATGTCCTATCTATGTTCGGGGTTGATTTGGCTCAGGGGCCAAGCCTCATTACTTCCTGTTCGGAAGCAGCGTGGTTGGCGGATTTTGTCAGCATGCACTCGAGTGGAGTACGCAGCAACCCCTGTGGCTCCGGAGAAAGGTGTACCATAAAATCATACACAGGGATTAAAGACAGAAATCCATTTAGCGCCGTCTCATGGGAGGTCAGCGAGGCTTTCGCCTGGGCCAAGAGGAGCGTAGTTCCAGCTGCTGCTGCCACGCTGCTCTCCCCAGATACCAGCAACAGGGTAGCCACGTGA

Function

symbol description
nrg3b Predicted to enable chemorepellent activity. Predicted to be involved in animal organ development and intracellular signal transduction. Predicted to act upstream of or within nervous system development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Orthologous to human NRG3 (neuregulin 3).

NR:

description
pro-neuregulin-3, membrane-bound isoform isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254356.1 True 2328 mRNA 0.54 4 10138438 10144729

Neighbor

gene id symbol gene type direction distance location
LOC122355287 fam20cb,fam20c,LOC107734234,LOC107699871,LOC107669229,LOC107731385,LOC108432010 coding downstream 332928 9788025 ~ 9805510 (-)
LOC122355272 cpped1,LOC107584109,LOC107669238,LOC107554009 coding downstream 382391 9743392 ~ 9756047 (-)
LOC122355289 ercc4,LOC107734247,LOC107669240,LOC107692079 coding downstream 397910 9734537 ~ 9740528 (-)
LOC122355243 LOC107734216,LOC107669223,LOC107584111,LOC107692080,LOC107554034 coding downstream 404098 9713064 ~ 9734340 (-)
zcchc4 zcchc4,LOC107657290,LOC107733462,LOC107738986 coding downstream 467158 9662758 ~ 9671280 (-)
chac2 chac2,LOC107749368,LOC107686371 coding upstream 465919 10610648 ~ 10613502 (-)
foxn2b LOC107698833,LOC107749364,LOC107550040,LOC107582787,LOC107728721,LOC107673647 coding upstream 755524 10900253 ~ 10915884 (-)
fbxo11b fbxo11b,fbxo11,LOC107728720,LOC107582786,LOC107550041,LOC107673644,LOC107698831,LOC108430631 coding upstream 774050 10918779 ~ 10931157 (-)
msh2 msh2,LOC107698830,LOC107582784,LOC107749362,LOC107550043,LOC107728724,LOC107673650 coding upstream 787133 10931862 ~ 10938013 (-)
socs5a LOC107582782,LOC107728716,LOC107698827,LOC107673648,LOC107550046,LOC107749358,LOC107550045 coding upstream 840313 10985042 ~ 10996581 (-)
G87055 NA non-coding downstream 371200 9763102 ~ 9767238 (-)
G87034 NA non-coding downstream 503321 9632044 ~ 9635117 (-)
G87019 NA non-coding downstream 563913 9573634 ~ 9574525 (-)
G86916 NA non-coding downstream 838539 9299679 ~ 9299899 (-)
G86861 LOC107734218,LOC107660853,LOC107584076 non-coding downstream 1269376 8867892 ~ 8869062 (-)
G87104 NA non-coding upstream 216148 10360877 ~ 10361414 (-)
LOC122355705 nrg3b,LOC107678479,LOC108426474,LOC107689960,LOC108273971,LOC107566665,LOC107387893 non-coding upstream 264610 10409339 ~ 10444778 (-)
G87125 svila,svil,LOC107584371 non-coding upstream 434025 10578754 ~ 10582536 (-)
G87164 NA non-coding upstream 460503 10605232 ~ 10606019 (-)
G87388 NA non-coding upstream 648334 10793063 ~ 10804738 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other downstream 198589 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other downstream 649126 9481559 ~ 9489312 (-)
LOC122355288 LOC107660874 other downstream 1260307 8875617 ~ 8878131 (-)
trnar-ccu_66 NA other downstream 1450868 8687498 ~ 8687570 (-)
plbd1b LOC107578697 other downstream 1450890 8682443 ~ 8687548 (-)
cript cript,LOC107582781,LOC107728714 other upstream 860277 11005006 ~ 11006954 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other upstream 898159 11042888 ~ 11045889 (-)
G87489 NA other upstream 1176694 11321423 ~ 11322603 (-)
G87569 NA other upstream 1688150 11832879 ~ 11835612 (-)
G87608 NA other upstream 1803811 11948540 ~ 11951155 (-)

Expression


Co-expression Network