LOC122355817 (LOC107695513,LOC107739060,LOC107653963,LOC107745680,LOC107593524,LOC101884976,LOC107579057)


Basic Information

Item Value
gene id LOC122355817
gene name LOC107695513,LOC107739060,LOC107653963,LOC107745680,LOC107593524,LOC101884976,LOC107579057
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 2398531 ~ 2402685 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254370.1
TATGGAGATCCTCAAGAAGCGGACGGTCAGATGAAATGGCACACAGAGGAAACATGAACACCTCGAGCATTTACAGCACATTCGGACGCTTCTTCCCTAATAACTTTTCTGTTTGGGAGCATCTCCAGAAGAACTGGACCACGCGCGACCTGACGCCTTTCTCCATCGACTTTCTGTTTGCGGGTCACGAACCAGACACTATAGTTTTAATGGTGATGTACGTGATCTCTTTCGTGACCGGACTGGTGGGGAACATCATGGCTCTGTGGGTCCTGACGCGCCGCAGGAATCGCTTGTCTGGAGCTTCAGCCACCAGGAGACTCCTGGTCAACCTGGCCGTGTGCGACATGATGGTGGTGTGCGTCTGCATGCCGGTCAACTTGGGACATCAGGTGTATAACGCCTGGGTGTTTGGAGACTTTCTGTGTCGAGCCGTGCCGTTCGTTCAGGCGGTGTCGGTCTCCGCGAGCGTTCTGAGTCTGGCCGTGATCAGTCTGAACAGATACTACAGCGTCCACAGTCCACTGCACGCCAGGTCTTTCTTCACGGCCAGAAGAATGATATGCATGATAGCCGTGGTTTGGGTCGTGTCTTCTGCGTTATGTTTGCCTTTATTCTTCATGAACACGACTAAGACTCTTTCCCTTCTGGACGGGCTGCACACCGTGACCGTGTGCGTGGAAAGCTGGTCTAAAGTCAAACTGCGCCAGGGTTACAACTTTTTACTCTTTTGCGCGTTGTATGGATTCCCGGTGGTCTTTAACCTGATCATTTGCTTCCTGACCGGTTGGAAACTGAGTAGAGGGGGCACGGCATCGATATCAGACCCCAACCAGCTCGCTCTGACCTCCTCTTCGACATCGCGCCTGAAAACGCGCAAGAGGATCGCCAAAATGGTCTTCGCGCTCGTGCTGCTCTTCACCTTCTCCTGGCTGCCGCTGTACGCCGTGGACATCTGGATCGATTCCAACATCCCCAGCTCCCCTGACAGAAACGACGAGCTGAGCAACGTCGAGCATAACTGGATTCTCCAGAGCAGACCCTTCGCGCAATGGCTGGGTCTCACCAACTCGTCCCTGAATCCCCTCTGCTACTGCTTTGTCGGAAACTTGTACAGATCGGCCAAAAGGTTCAGGGAAAGCTACAGAGAGAAAATGTCTTCGGTCTTGAGTCTGACCAATAAATCTTCAATTAGAAATTCCGCGACTAAAACCCAGCTGCGCAACTCTGGCTCGTCCAGGAGGTTCGCGTCGGAAACGAGGAGCTGCAACGGGTTCAAACTGACCAGAAGTAAAAGCGTGTCTTCGACGACCGTGTGTGAGAGCATTTGACTTGGGGAGCGCGAGAATGTACAGGCACAGATGGAAATATGAATTAAGGGTCAtgctttataaataactttCATTGAAAAGTCATTATCAAACGTCAGATGCTGCTTATAGAGTAGTAGTTCATGTACATTttagtcaatatatatattttaagggtttttttgCAACACAATAACACTGTGcttctatttattatttgctttttataattaaagacatttttcataaaaaaatatatatttccagCATAATTTAAATTTGAGTTTTTCAGGTGTGGGTAGTtgacgaataaaaaaaaagaccattttgTGTGACATAGGAAAAATTTAGaaacaaaaaacttaaattaacatgaaaaaattaGTTACAAATAGCTTAAGAGAGGTTTTgcattaacatatatatatatatatagtttttacatttttctgtcacacacTGATGAAGTCAACTACCCATGTCTCTTTTTTCCAGTGTTGTCTTAGACTCAGAAtgcataatgtaatattattaataatttaaggaTGTTTTCAAAAGTTATCAATCAAAGGTATTACTAagcattaatatgaattatatatttatctcggctatttagatttttttctttttttattagtttcagTTAAATAAGTGAATACCAGACTTGTTCTGAAATAAGTCCATATATGAGTGGAAAACTGTGGTCCGATTTACGGGGACAAAACCAGAGCGTGTGGCTCAAGTCAAGATTAATTGTACCATTGAGAGGCTTTAGCCCTGACGAGTGGTTGTCTGTTATTCCCACCATCTCCTCCCCGGCAGAAATCTCAAGAgctctaaataataaatattcctaCTGCTATACAAGACTGTATCACCGCACCGTGCATGTTTACAGTCTTTATTGAAACCGTTAAGTTATACAAATTTAACGACAAAttagagttatattaaaaaaacatactgctTATGTTCCAGTGTTTGCTGTCACACAAGAAAAAAACGACTCGGTAGgagattaatatatttatgcaagGTAATTTCCTTATTGTGCTAGCGTGACTATTACAGATGATAATTTGTTGTCACTTACATTGAGCACAGATGCGCACTCTCTCGGTGAATGCTAACCTGGCTGTGATTCTGTGCAGTAAAATTAATTTCGCATTAATCCGAACAAATGGCGTTCTAAGATTATCCTCAAGTGCAAAAGATTTTCAGCGATCTCTGCAAGCATGCTGGCTATATTTCAGAAACTATAATTATGCCGGTTTCGCTTCATTAACTGAAAATTGACTGTGCATAATTCGCTTAGTAATGAATCCAAGCAAGATACATCGGCGCAGAGATGCATTGCAGATGAGTGCTGATTATCGTAAATATGACATAAGCATCACCTCGGATGCTGATGCTTATTATAAATACCCAAATAAGCTGTGTAATGCTCTGCATTTGATTGAGATgcagtatttaattttaaattagcaGCGTTCACACCACTTAAGCTTGAAATATGCCCACATTGATAACGTAATAGATGTATATAACAGATCATGTAATAgaataacatatataaatgcttaACATTGAATTTGAATGAtgtatattcttatttttgatAAACCAGTTAAAATTTCGAAGCTCATCCGAAGCACAGTAAAAGTAGctctatttttgcaaatatattacagctttttttctctcactaGCGTACCGAAGAGCCCTAATGCATTACCATAATtgacatttttactgtttatagcAGGGAAAATTGAGTGACTAAGGCCtctattttgctttaaaagatCTCAAGAGTGTCCtctgattacatttatttaaactgaacGTCTAGCACGAATGGGGCTCCTGTCAGTCATTGAAAACAAATGAGCGCCATAATGGATGTAGTGCCTGTGCTAATAACCTCAGAGAGCTTGCGCCGTCAACAATTCAGTCTGgtttcaaaacaaaaggaaCGTCGGTGACAAACCGCGCCGCTCGGCGTGGCTTTAAAAGCGTAAATcgaacattaaaacaattaccGCGGCTTAATAACTCACACCTGATGGAGAGAATACACGCCACGGTACTGAATATTTTAGGCCGTCCGTGTTCATAGGCGGTCTCTGAATGAACTAAAATTTCCTGCAGTGACCGGAGTCGTTGTTATTCGGCGTGGGTGTTCATTGCTGCCACGTTCTGCTTTGTATTTTGAGGACGGAGGGGAAACCTGCGAGCGTGCTCAATAAATTATCGTTCGCTTTTTTCGTCAGACTTTGGCTGCAGTTACTCTTTCTCGCTCATCTGGACATCTAAAGCTATTCATCTGTAAAACAAGAAACGGGGCTTCTTACCTGGTATCTCTTCAGTCCAGCCGCTGAGTCTAATTGAATGTGTCGGTCCACACAGTGGGTTCTcttcaaagctttttttatatattcgaTCAGTTTAATTGTACGCCTAATGGAACTGAATGTAAGAAAGATTCTGTTTGAAGTCTTCAAACACGGCATAAAAGGCTTTTGAACTCTCCtttttctgtcattaataaACGCAGCAACTAGCTAAAGGGCAATATAGTGTACACCAAGGCTAAAGAAATCGTTCCCACAAAAATGAACATATGCTGGAAATGTATTTACCCAGCCAAGGCCATCCAAGATTAGCGTGTCTTCATCACAGCAGTAATCCATTTGACTCCAATGCATCAAGCGATATATATTGTGATGTGAAAAgctaaaaaacaaatccatcatcaGCTCTTTTGGACTGTTTATGCTTGTAAACAGCACTTATGCGTATTTCTCACCTGATGAGACTACTTTCTCAGTTCAGAAAGCAC

Function

NR:

description
PREDICTED: orexin receptor type 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254370.1 True 4155 mRNA 0.42 1 2398531 2402685

Neighbor

gene id symbol gene type direction distance location
adam8b LOC107654071,LOC107745666,LOC107739052,LOC107695548,LOC107596597,LOC107593516 coding downstream 5631 2381934 ~ 2392900 (-)
exoc6 exoc6,LOC107654070,LOC107695547 coding downstream 18122 2338676 ~ 2380409 (-)
LOC122355364 cyp26a1,LOC107653962,LOC107593523,LOC107745679,LOC107596578,LOC107695519,LOC107739064 coding downstream 62927 2331293 ~ 2335604 (-)
egr2b egr2b,LOC107739063,LOC107653961,LOC107745678,LOC107596614,LOC107593522,LOC107596611 coding downstream 254754 2141370 ~ 2143777 (-)
tmem26b tmem26,tmem26b,LOC107695511,LOC107745662 coding downstream 420816 1974770 ~ 1977715 (-)
crym crym,LOC107745653,LOC107569187,LOC107753321,LOC107684776 coding upstream 67338 2470023 ~ 2473570 (-)
snu13b snu13b,nh2l1,snu13,LOC105898651,LOC105031476,LOC106589607,LOC105910236 coding upstream 72311 2474996 ~ 2476396 (-)
trnal-uag_3 NA coding upstream 91025 2493710 ~ 2493791 (-)
psmc5 psmc5,LOC107745657,LOC107753303,LOC107684752 coding upstream 178373 2581058 ~ 2585819 (-)
smarcd2 smarcd2,LOC107684754,LOC107569192,LOC107560559,LOC107694073,LOC107753305 coding upstream 185059 2587744 ~ 2596891 (-)
G85119 NA non-coding downstream 87060 2311243 ~ 2311471 (-)
G85116 NA non-coding downstream 89498 2306892 ~ 2309033 (-)
G84956 NA non-coding downstream 396895 2001334 ~ 2001636 (-)
G84928 rhobtb1,LOC107654062,LOC107727061,LOC107745661,LOC107695540 non-coding downstream 429481 1964986 ~ 1969050 (-)
G84919 NA non-coding downstream 643960 1751402 ~ 1754571 (-)
G85173 NA non-coding upstream 79562 2482247 ~ 2483927 (-)
G85174 NA non-coding upstream 82509 2485194 ~ 2486204 (-)
G85177 NA non-coding upstream 103493 2506178 ~ 2507961 (-)
G85165 LOC107745672,LOC106958681,LOC103481982 non-coding upstream 170626 2573311 ~ 2576906 (-)
G85214 NA non-coding upstream 276037 2678722 ~ 2679291 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other downstream 113479 2173988 ~ 2285052 (-)
ank3b ank3b,LOC107654059,LOC107695539 other downstream 451119 1814083 ~ 1947412 (-)
dlx4b dlx4b,LOC107739765,LOC107557342,LOC107708902 other downstream 1501014 889710 ~ 897517 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other downstream 1846088 543246 ~ 552443 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other downstream 1898312 496964 ~ 500219 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other upstream 365223 2767908 ~ 2781353 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other upstream 686944 3089629 ~ 3103315 (-)
G85366 NA other upstream 855846 3258531 ~ 3299688 (-)
kcnh6b LOC107684759,LOC107753307,LOC107573422 other upstream 1814719 4217404 ~ 4230039 (-)
LOC122355775 NA other upstream 1895182 4297867 ~ 4305215 (-)

Expression


Co-expression Network