rnls (rnls,LOC107669231,LOC107584138,LOC107680274,LOC107594162)


Basic Information

Item Value
gene id rnls
gene name rnls,LOC107669231,LOC107584138,LOC107680274,LOC107594162
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7663106 ~ 7696729 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254395.1
aaagggacaggGTGCTAATCGAACGTGATCGTCGAACGAGCAAGATAGCGTTgttattttaccttttataaaaatgtctcGAGTTCTAATAGTTGGTGCTGGACTTACTGGCAGTTTATGTGCCTGTCTGCTGCGAAGGCAGCTGCCAAACAAAGTAAATATAGTTGTGTGGGACAAATCTCGGGGTGCAGGGGGGCGAATGTCCACAAGCAGAAGTCCAAATGATCCTTCATGCACAGTTGATCTTGGTGCTCAATATATAAGTGCAACACCATACTACGCTCATATTCACAGCAGtttttatgaagAACTCTTAgcacaagacattttaaaacctCTCAATGCTCCCGTTGAAGGCATGATGTTAAAGGAAGAAGAAATTGTGAACTATGTGACACCCCGTGGAGTGTCCTCCATCATCAAACACTACCTCAAAGAGTCAGCAGGAGCAGAGGTGCTCTACGACCGACACGTCACTCACATTCACCGGAAAGACACCGGCTGGGAAGTGTGTCGCAAAGGGGGAACGCCAGAGCGGTTTGACATAGTGGTTTTAACCATGCCAGTACCCCAGATACTTCAGCTGCAAGGAGATGTGGGATCTTTGATGGGGGAGAATCAGAGGAGGATGCTGGAGGCTGTCAGCTACTCTTCCCGCTACGCACTTGGACTCTTCTACAAAGCCGGCACACGAATCAACGTCCCTTGGGCGGCCAAGTACGTCTCCAATAATCCCTGCATTCGCTTCATCGCCATAGATGATAAAAAGCGCAATTTAGCTTCGAAAGATTGCAGGCCTTCTGTGGTGGTGCACACTAGTGTCCCCTTTGGCGTCCAACACCTAGAGGAGGAGAAGGATGCCGTACAACCCATCATCCTCGAAGAGCTGGAAAAGGTGATGCCAGAGCTACCTCAACCTGAGAGCATCAAGTGTCAAAAGTGGAGATACTCACAGGTGACAAGATCGGTGGCTGATTGCCCAGGGCAGATGACACTGCAATCCCAGCCTCTGCTGGTGTGTGGAGGGGACGGCTTCACACACTCCAATTTCGACGGCTGCATCGAGTCTGCCCTGAAGGTCTTTGAGGTTCTGAAGTCTTCTCTCTGAAAGGGGGTTGGGAAAGTATGCCTTTATTTTGGGTTTTTGTTATGGAGGATGGCACATTGATTTAGATTAAAGCCCCTCCCCGCAGGAAGATGGATGTACTGCACAAAGCACAGTAGAACTGTCTCGCCTGTGTCTGCAGACAtacattttgttacaaaaaccaaTTATACTGTCCGTGCCAGATGCTGAGGATTAGAGGACAACGGAGCACTGTGCAAGTtatgtattaatgtatgtatattatgaaTGCGTTCAGGTACTGTCAGCCTTCCTCTGTCATCTCagattaataaagtaattaaaacatg
>XM_043254396.1
aaagggacaggGTGCTAATCGAACGTGATCGTCGAACGAGCAAGATAGCGTTgttattttaccttttataaaaatgtctcGAGTTCTAATAGTTGGTGCTGGACTTACTGGCAGTTTATGTGCCTGTCTGCTGCGAAGGCAGCTGCCAAACAAAGTAAATATAGTTGTGTGGGACAAATCTCGGGGTGCAGGGGGGCGAATGTCCACAAGCAGAAGTCCAAATGATCCTTCATGCACAGTTGATCTTGGTGCTCAATATATAAGTGCAACACCATACTACGCTCATATTCACAGCAGtttttatgaagAACTCTTAgcacaagacattttaaaacctCTCAATGCTCCCGTTGAAGGCATGATGTTAAAGGAAGAAGAAATTGTGAACTATGTGACACCCCGTGGAGTGTCCTCCATCATCAAACACTACCTCAAAGAGTCAGGAGCAGAGGTGCTCTACGACCGACACGTCACTCACATTCACCGGAAAGACACCGGCTGGGAAGTGTGTCGCAAAGGGGGAACGCCAGAGCGGTTTGACATAGTGGTTTTAACCATGCCAGTACCCCAGATACTTCAGCTGCAAGGAGATGTGGGATCTTTGATGGGGGAGAATCAGAGGAGGATGCTGGAGGCTGTCAGCTACTCTTCCCGCTACGCACTTGGACTCTTCTACAAAGCCGGCACACGAATCAACGTCCCTTGGGCGGCCAAGTACGTCTCCAATAATCCCTGCATTCGCTTCATCGCCATAGATGATAAAAAGCGCAATTTAGCTTCGAAAGATTGCAGGCCTTCTGTGGTGGTGCACACTAGTGTCCCCTTTGGCGTCCAACACCTAGAGGAGGAGAAGGATGCCGTACAACCCATCATCCTCGAAGAGCTGGAAAAGGTGATGCCAGAGCTACCTCAACCTGAGAGCATCAAGTGTCAAAAGTGGAGATACTCACAGGTGACAAGATCGGTGGCTGATTGCCCAGGGCAGATGACACTGCAATCCCAGCCTCTGCTGGTGTGTGGAGGGGACGGCTTCACACACTCCAATTTCGACGGCTGCATCGAGTCTGCCCTGAAGGTCTTTGAGGTTCTGAAGTCTTCTCTCTGAAAGGGGGTTGGGAAAGTATGCCTTTATTTTGGGTTTTTGTTATGGAGGATGGCACATTGATTTAGATTAAAGCCCCTCCCCGCAGGAAGATGGATGTACTGCACAAAGCACAGTAGAACTGTCTCGCCTGTGTCTGCAGACAtacattttgttacaaaaaccaaTTATACTGTCCGTGCCAGATGCTGAGGATTAGAGGACAACGGAGCACTGTGCAAGTtatgtattaatgtatgtatattatgaaTGCGTTCAGGTACTGTCAGCCTTCCTCTGTCATCTCagattaataaagtaattaaaacatg

Function

symbol description
rnls Predicted to enable oxidoreductase activity, acting on NAD(P)H. Predicted to be active in extracellular region. Human ortholog(s) of this gene implicated in essential hypertension and hypertension. Orthologous to human RNLS (renalase, FAD dependent amine oxidase).

NR:

description
renalase isoform X1

GO: NA

KEGG:

id description
K18208 RNLS; renalase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254395.1 True 1416 mRNA 0.47 7 7663106 7696729
XM_043254396.1 False 1413 mRNA 0.47 7 7663106 7696729

Neighbor

gene id symbol gene type direction distance location
ankrd22 ankrd22,LOC107753431,LOC107758445,LOC107584139,LOC107594161 coding upstream 11362 7648181 ~ 7651744 (+)
acta2 acta2,LOC107683715,LOC106531354 coding upstream 26958 7630560 ~ 7636148 (+)
ch25h ch25h,LOC107753436,LOC107584143,LOC107669234,LOC107683723,LOC107758440,LOC107594211 coding upstream 46093 7615839 ~ 7617013 (+)
slc16a12b slc16a12b,LOC107753457,LOC107669179,LOC107584144,LOC107758438,LOC108413683 coding upstream 58552 7597840 ~ 7604554 (+)
pank1b pank1b,LOC107753437,LOC107669213,LOC107683711,LOC107758439,LOC107594157,LOC108413682 coding upstream 66102 7588301 ~ 7597004 (+)
atad1b atad1,atad1b,LOC107680273,LOC107669218 coding downstream 46106 7742835 ~ 7747786 (+)
cyth3a cyth3a,cyth3,LOC107753449,LOC107669236,LOC107584132,LOC108437157,LOC108258062,LOC107556600 coding downstream 66260 7762989 ~ 7777555 (+)
pms2 pms2,LOC107753423,LOC107594169,LOC107724702 coding downstream 99531 7796260 ~ 7802299 (+)
rsph10b LOC107669165,LOC107584188,LOC107753448 coding downstream 106105 7802834 ~ 7807610 (+)
bhlha15 bhlha15,LOC107669184,LOC107753453,LOC107584229,LOC107594213,LOC107699868 coding downstream 154779 7851508 ~ 7854838 (+)
G86219 NA non-coding upstream 158607 7502578 ~ 7504499 (+)
G86202 NA non-coding upstream 274125 7387668 ~ 7388981 (+)
LOC122355189 NA non-coding upstream 343515 7317500 ~ 7319591 (+)
G86141 NA non-coding upstream 365072 7297683 ~ 7298034 (+)
G86140 NA non-coding upstream 365563 7297318 ~ 7297543 (+)
G86275 NA non-coding downstream 4614 7701343 ~ 7701799 (+)
G86283 NA non-coding downstream 22255 7718984 ~ 7719283 (+)
G86268 NA non-coding downstream 23663 7720392 ~ 7723861 (+)
G86374 NA non-coding downstream 149829 7846558 ~ 7846862 (+)
G86460 NA non-coding downstream 360202 8056931 ~ 8060176 (+)
G86143 NA other upstream 354877 7307924 ~ 7308229 (+)
G86142 NA other upstream 358258 7303138 ~ 7304848 (+)
G86029 NA other upstream 1140535 6521829 ~ 6522571 (+)
G86019 LOC107570179 other upstream 1221580 6440821 ~ 6441526 (+)
G85986 adprh,LOC108411014,LOC107726130,LOC105894051,LOC108274007 other upstream 1446539 6214919 ~ 6216567 (+)
LOC122355675 NA other downstream 119094 7815823 ~ 7844083 (+)
msrb1b msrb1b,LOC100705913 other downstream 408419 8105148 ~ 8106780 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other downstream 499235 8195964 ~ 8197904 (+)
arsg arsg,LOC107734203,LOC107660857,LOC107692046,LOC107554066 other downstream 1139719 8836448 ~ 8852449 (+)
pkd1b LOC107723630,LOC107665861,LOC107556563 other downstream 1588934 9285663 ~ 9306831 (+)

Expression


Co-expression Network