LOC122355847 (LOC107690849,LOC107671610,LOC107710396,LOC107565533,LOC107575145,LOC107575144)


Basic Information

Item Value
gene id LOC122355847
gene name LOC107690849,LOC107671610,LOC107710396,LOC107565533,LOC107575145,LOC107575144
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 44012 ~ 63043 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254420.1
CGCCAAAAAAGGGCTGGAGctggagaaacacacacacacacacacacacagagacagacggACACAAGGACTGAGCTTCAGGAATCATGGAGCAGGGCTGTGGATGAGCCGGATCTCCAGCATGTCCACGGGCCCCGGGCCCCCAGGGGCCACTCACGTGAACGAGCCGGATCCGAGCGCGGCGGGTCTCGCCAAGGGCCCCGTGGGCCTACAGACACTACTGGACCTGCTGGTGGGAGTTTATCAGGAGTTCAGCTCCGACGCTCTGCTCAGAGAGAAACATGTGCAGCACTTCCTACAGTGGGCGGAGCCTTTGGTCAGACAGGTGAAGAAGACTCGGATAAGCAGGAATGACTTTGACATCTTGAAGGTGATCGGCCGAGGAACCTTCAGCGAGGTGGCTCTGGCTCGTATGCGTGACACACAGCAGGTCTGCGCTCTGAAGATCATGAACAAGTGGAACATACTGAAGCGTGGAGAGacgGCGTGCTATCAGGAGGAGCGAGAGGTTCTGCTCAAAGGAGACCGGCGCTGGATCACTGAACTACATTACGCTTTCCAGGACGACGATTACCTCTATCTGGTCATGGATTACTATGTCGGTGGAGATCTGCTGACGTTGCTGAGTAAGTTTGGTGATCGGATCCCGGAGGACATGGCTCAGTTCTACCTGGCCGAGATGGTGACGGCTATCGATTCAGTCCACAGACTCGGTTACGTGCACAGAGACATCAAGCCTGACAACATTCTCCTGACGGCAGAAGGTCACGCTCGGTTGGGGGATTTTGGCTCCTGCCTGCGTCTGGAGGATGACGGCCTGgtCCACTCGTCTCTGGCCGTGGGGACTCCAGACTATCTGTCTCCAGAGATCCTGCGGGCGGTGGAGGCGGGCGGAGGCTACGGCTCTGAGTGTGATTGGTGGGCTCTGGGCGTCTGCGCCTACGAGATGCTGCTGGGAACCACACCCTTCTACGCCGAGTCCATCTCCGAGACCTACGCCAAGATTATACACTTCAAGGATTATTTTGACTTTCCTCCGGGGTCGGAGGTGTCCGAGGAGGCACGGTCCCTCATCAGCGCTCTGATCTGTGACAGGAGCGAGAGGCTGGGCTCACGGGGCTCCGGGGACTTCAGAAAACACCCGTTCTTCACAGGTTTGGACTGGAGTTCCCTTCATCTCCTCCCTCCTCCGTACCGTCCCGATGTCTCCGACGCCACAGACACCTCCAACTTCGACGTGCTGGACGACTGCCTGAGCCACACGGAGAGCCTGAGCGAGGCGACGGAGCGAGCGCCGGTCGGGCTTCATCTGGCGTTTGTGGGATACTCTTACACAGCCACCAGAGAGACGGGAGCGCTGGACCGCAGCAGACACATCATGATGGAGATCAACCAGCAGCAGGAGAGAGATCTGCTCCACCTGCAGGAAAAACTGCAGTCTGAATCAGATGTCGGTGTGAACGAGCTGCAGAATCAGGTGTGGCAGCTCAGAGAATCCGTCACCGCTGagctgatgtcacttcctgaaCTTCCTGCTGAGCCAGAGACGGAGCAGAGGGACACACACGCTTATGAGCTGCAGCGGCGTCTGCACAAGGCCGAGCACAGGAACAAAGAGCTTGAGCAGGAGATGACCGAACTGAGAGAAGAGATCCTCAGACTGACCGCCGGCAGAAACCAAGagctgtgtgtgtgtcggtgtcTGGGCAGTCAGGACTCCGTGTGGGACAGCTCCGTGACGCCCCCTGCCTGCCATTACCCGCTAGTGACGGCCCTGCACCGACACCTGGTGCTCTTCAACAGGgtgcgCAGGCCTCAGGTGAGGAGTGAGTCGTATCTGCTGGTCTGCGCTGAAGGGACTGAACTACAGCTGTGGGAGCGACACGGCAGCGCCGATCTGTGCTGAAGAGCACTAGAGAGTCGCAGTCTGATCTCTTCTTCTCCGCTCTTCAGTTCTATAAAGCCTTTCAGCATCACGGGCACACAATTGAAATCACTAGGATTCCTGCGTCTCTTCAGAAAAGCTCACAGCCAGGACTCTGATTCACGTTTACAAGCGTTTCAGCTCCATATTCCGATTGCGCTCATATTCTGAATATGCCgtttatatacagaaatatgGTTGTTTCAGGTCTGCTGATCTACACGTGTTATAACACAAGAGAGTCCAGATGCTGCCGCCGGTTCTGCAGTGTGTgctcagttattatttttattaaaacttaaacaCGGTTTAATTAGAGACCCTTCGAAAAGTCCTAAAACTCTGACTCGAACTGGAAAGAGTTGTTCTTATTTGATTGCCACTTCACAAATCAGTTTCCATTCCTTAACATCTATGGCTAATTATCATCACCCATAATTCTGTGCAGTCTGAGCATGTGACTCTCCTTTCAGGTGATTTTCTGAATGAGGTGTTTACATGCAGCTCTTTTCTCTGAAAACCACCTCATCCCTGAAGAACGAGTCAGAGGACAACGATACAGAGTCTAGGTCAAAACGATCAGATTTTCTTTTAGCCCAgaatgtttcatgaagatatttagtaaatttcttaaggtaaacatataaaatcttcattttatattagtgatatgcatcgctaagaacttcatttgcaCAGCTTGAAAAGTGGTTTGCATTTAGATCGTTCTGCACATCCAGATTTTCACATCgttgtatctcagacaaatattatccgatcataacaaaccagacatcagtggaaagaTGATTTATTCAGCTCTTATGATTGGTTTGGAGGTGATTGGatgtgctgtttaatatatatgaGTCTATACTAATCTGAATATTGCCAAATTCTGATTAATATCAGAATATTGAGGTGCATGGCTGTAAAAGAAGAAGTGATTCAGAATCTGAAGTGTCCGACCTGTCCTGTCTGTTTATGGGAATCTGCTCTGAGAATCATCTAGTTTTATTCACACTTGTTAGTGCTCAGCTATCATATACTACAGCAttattttgtacaaaacaagaaattaagttgttttaacattaaaaactatttaagagtgagaaacttaaaaataaagttggcttatttatttaacgc
>XM_043254421.1
CGCCAAAAAAGGGCTGGAGctggagaaacacacacacacacacacacacagagacagacggACACAAGGACTGAGCTTCAGGAATCATGGAGCAGGGCTGTGGATGAGCCGGATCTCCAGCATGTCCACGGGCCCCGGGCCCCCAGGGGCCACTCACGTGAACGAGCCGGATCCGAGCGCGGCGGGTCTCGCCAAGGGCCCCGTGGGCCTACAGACACTACTGGACCTGCTGGTGGGAGTTTATCAGGAGTTCAGCTCCGACGCTCTGCTCAGAGAGAAACATGTGCAGCACTTCCTACAGTGGGCGGAGCCTTTGGTCAGACAGGTGAAGAAGACTCGGATAAGCAGGAATGACTTTGACATCTTGAAGGTGATCGGCCGAGGAACCTTCAGCGAGGTGGCTCTGGCTCGTATGCGTGACACACAGCAGGTCTGCGCTCTGAAGATCATGAACAAGTGGAACATACTGAAGCGTGGAGAGacgGCGTGCTATCAGGAGGAGCGAGAGGTTCTGCTCAAAGGAGACCGGCGCTGGATCACTGAACTACATTACGCTTTCCAGGACGACGATTACCTCTATCTGGTCATGGATTACTATGTCGGTGGAGATCTGCTGACGTTGCTGAGTAAGTTTGGTGATCGGATCCCGGAGGACATGGCTCAGTTCTACCTGGCCGAGATGGTGACGGCTATCGATTCAGTCCACAGACTCGGTTACGTGCACAGAGACATCAAGCCTGACAACATTCTCCTGACGGCAGAAGGTCACGCTCGGTTGGGGGATTTTGGCTCCTGCCTGCGTCTGGAGGATGACGGCCTGgtCCACTCGTCTCTGGCCGTGGGGACTCCAGACTATCTGTCTCCAGAGATCCTGCGGGCGGTGGAGGCGGGCGGAGGCTACGGCTCTGAGTGTGATTGGTGGGCTCTGGGCGTCTGCGCCTACGAGATGCTGCTGGGAACCACACCCTTCTACGCCGAGTCCATCTCCGAGACCTACGCCAAGATTATACACTTCAAGGATTATTTTGACTTTCCTCCGGGGTCGGAGGTGTCCGAGGAGGCACGGTCCCTCATCAGCGCTCTGATCTGTGACAGGAGCGAGAGGCTGGGCTCACGGGGCTCCGGGGACTTCAGAAAACACCCGTTCTTCACAGGTTTGGACTGGAGTTCCCTTCATCTCCTCCCTCCTCCGTACCGTCCCGATGTCTCCGACGCCACAGACACCTCCAACTTCGACGTGCTGGACGACTGCCTGAGCCACACGGAGAGCCTGAGCGAGGCGACGGAGCGAGCGCCGGTCGGGCTTCATCTGGCGTTTGTGGGATACTCTTACACAGCCACCAGAGAGACGGGAGCGCTGGACCGCAGCAGACACATCATGATGGAGATCAACCAGCAGCAGGAGAGAGATCTGCTCCACCTGCAGGAAAAACTGCAGTCTGAATCAGATGTCGGTGTGAACGAGCTGCAGAATCAGGTGTGGCAGCTCAGAGAATCCGTCACCGCTGagctgatgtcacttcctgaaCTTCCTGCTGAGCCAGAGACGGAGCAGAGGGACACACACGCTTATGAGCTGCAGCGGCGTCTGCACAAGGCCGAGCACAGGAACAAAGAGCTTGAGCAGGAGATGACCGAACTGAGAGAAGAGATCCTCAGACTGACCGCCGGCAGAAACCAAGAGCTCCGTGACGCCCCCTGCCTGCCATTACCCGCTAGTGACGGCCCTGCACCGACACCTGGTGCTCTTCAACAGGgtgcgCAGGCCTCAGGTGAGGAGTGAGTCGTATCTGCTGGTCTGCGCTGAAGGGACTGAACTACAGCTGTGGGAGCGACACGGCAGCGCCGATCTGTGCTGAAGAGCACTAGAGAGTCGCAGTCTGATCTCTTCTTCTCCGCTCTTCAGTTCTATAAAGCCTTTCAGCATCACGGGCACACAATTGAAATCACTAGGATTCCTGCGTCTCTTCAGAAAAGCTCACAGCCAGGACTCTGATTCACGTTTACAAGCGTTTCAGCTCCATATTCCGATTGCGCTCATATTCTGAATATGCCgtttatatacagaaatatgGTTGTTTCAGGTCTGCTGATCTACACGTGTTATAACACAAGAGAGTCCAGATGCTGCCGCCGGTTCTGCAGTGTGTgctcagttattatttttattaaaacttaaacaCGGTTTAATTAGAGACCCTTCGAAAAGTCCTAAAACTCTGACTCGAACTGGAAAGAGTTGTTCTTATTTGATTGCCACTTCACAAATCAGTTTCCATTCCTTAACATCTATGGCTAATTATCATCACCCATAATTCTGTGCAGTCTGAGCATGTGACTCTCCTTTCAGGTGATTTTCTGAATGAGGTGTTTACATGCAGCTCTTTTCTCTGAAAACCACCTCATCCCTGAAGAACGAGTCAGAGGACAACGATACAGAGTCTAGGTCAAAACGATCAGATTTTCTTTTAGCCCAgaatgtttcatgaagatatttagtaaatttcttaaggtaaacatataaaatcttcattttatattagtgatatgcatcgctaagaacttcatttgcaCAGCTTGAAAAGTGGTTTGCATTTAGATCGTTCTGCACATCCAGATTTTCACATCgttgtatctcagacaaatattatccgatcataacaaaccagacatcagtggaaagaTGATTTATTCAGCTCTTATGATTGGTTTGGAGGTGATTGGatgtgctgtttaatatatatgaGTCTATACTAATCTGAATATTGCCAAATTCTGATTAATATCAGAATATTGAGGTGCATGGCTGTAAAAGAAGAAGTGATTCAGAATCTGAAGTGTCCGACCTGTCCTGTCTGTTTATGGGAATCTGCTCTGAGAATCATCTAGTTTTATTCACACTTGTTAGTGCTCAGCTATCATATACTACAGCAttattttgtacaaaacaagaaattaagttgttttaacattaaaaactatttaagagtgagaaacttaaaaataaagttggcttatttatttaacgc

Function

NR:

description
PREDICTED: myotonin-protein kinase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254420.1 True 3076 mRNA 0.50 15 44012 63043
XM_043254421.1 False 3029 mRNA 0.50 14 44012 63043

Neighbor

gene id symbol gene type direction distance location
LOC122355848 akt2l,akt2,LOC107722100,LOC107671613,LOC105023568,LOC107711004 coding upstream 40752 103795 ~ 111126 (-)
LOC122355205 dlx4b,LOC107739765,LOC107664616,LOC107708902,LOC107557342 coding upstream 108719 171762 ~ 176703 (-)
LOC122355756 LOC107660458 coding upstream 130690 193733 ~ 208068 (-)
LOC122355212 LOC107561990,LOC107575498 coding upstream 155171 218214 ~ 222873 (-)
LOC122355214 LOC107561990,LOC107575498 coding upstream 160835 223878 ~ 228330 (-)
G84492 LOC107565537,LOC107671635,LOC107690840 non-coding upstream 25012 88055 ~ 89574 (-)
G84487 NA non-coding upstream 77057 140100 ~ 141081 (-)
LOC122355221 LOC107561990,LOC107660458 non-coding upstream 133858 196901 ~ 197393 (-)
LOC122355220 LOC107561990,LOC107660458 non-coding upstream 134357 197400 ~ 198867 (-)
LOC122355197 NA non-coding upstream 319529 382572 ~ 385022 (-)
G84486 emsy,LOC107671635,LOC107690840,LOC107722098,LOC107565537,LOC107747365 other upstream 15574 78617 ~ 129985 (-)
G84493 NA other upstream 28447 91490 ~ 93801 (-)
LOC122355191 dusp3b,LOC107753093,LOC107590411,LOC107688089,LOC107709997 other upstream 105005 168048 ~ 171295 (-)
G84521 NA other upstream 256287 319330 ~ 321260 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other upstream 277230 340273 ~ 360482 (-)

Expression


Co-expression Network