aqp8a.1 (LOC107584217,LOC107734162,LOC107669195,LOC107692108,LOC107731388,LOC107594225)


Basic Information

Item Value
gene id aqp8a.1
gene name LOC107584217,LOC107734162,LOC107669195,LOC107692108,LOC107731388,LOC107594225
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8187553 ~ 8190280 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254442.1
AAGCCACCAGGGGTGATGACGGGGGAGACTGTTGGCCCGCCTTACCACCACTCCACCCCATCCTCCGTCCACCTTTATCAGTACGACGCCGCAGTGTGTGCGAGCACAGATCACCTGAAGTTTCACACAGACGAGATGACCTCAGCCGAGTCCAAGTCGGAGCTCTTTACGGTAGCCACCGGCGATGGAGGGGATGCCCATCAGAATCAGCCCAAGAAGCTGTCTTTCTATGAGCACTACATTCAGCCGTGCCTAGCGGAGGTCCTCGGCTCCACTCTCTTCATGTTTGTAGGCTGTGTGTCGGTCATGGGCAACGTGGGAATCAGCGGGAGCATCCAGCCTGCGCTGGCACACGGACTAGCACTGGCTATAGCAATTGCCATTTTTGGAGAAATCAGCGGCGGTCACTTCAATCCagccgtgtctgtgtgtgtttacctcaTCGGGGGAATGGAACTGATGCTCCTGCTGCCATATGTGCTCTCGCAAATGTTAGGTGGAGTGATTGCTGCCAGCCTCGCCAAAgCTGTCACTACGAACGAAGCGTTTAACAATGCAACGGGAGCAGCGTTTGACGCCGTCCAGTCATCTCACGGAACTGGCTCTGCGACCGTGGCCGAGATGATTATGACCCTGTTCCTGACTATGGTTGTGAGCATGGGTGCCGTGAACGGAAGGACCCGAAGCCATCTGGCTCCTTTCTGTATTGGGCTCACGGTGACTGCAAATATTTTGGCTGGGGGTGGAATATCAGGGGCATGTATGAATCCGGCACGGGCCTTCGGGCCAGCAATAGTGTCCGGTCACTGGGAGTACCACTGGATATATTGGGTGGGACCTCTGACCGGCGCTCTGGTCACCGTCAGTCTCGTGAGGTTGGTAGTGGGAGACAAGAAGATCCGCGTTATTTTCAAGTGATGGAGAGAGGCCCTCGGAGGATCTCGTGTCGCAAGCTTTTTAAAGTCAAGATAACTTGTAAAGCGTTGTATGATATTGTCAAACATTTCTATTGATGCAGTATTCTAAACCTTTCTGTATTCTGATACTTTATTGTCTCTTTGCCAAaagtatttgttgttttagtttttatagcTTGCTATAATGTATTCTGATGTTTTCTGTTAATAAACTGTCTTTTGTTAAAAA

Function

NR:

description
aquaporin-8-like

GO:

id name namespace
GO:0071918 urea transmembrane transport biological_process
GO:0006833 water transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015204 urea transmembrane transporter activity molecular_function
GO:0005372 water transmembrane transporter activity molecular_function

KEGG:

id description
K09869 AQP8; aquaporin-8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254442.1 True 1146 mRNA 0.51 5 8187553 8190280

Neighbor

gene id symbol gene type direction distance location
lcmt1 lcmt1,LOC107734249,LOC107584116,LOC107669194,LOC107731431,LOC107594185 coding upstream 1579 8180004 ~ 8185974 (+)
grid2ipb grid2ip,LOC107584118,LOC107734213,LOC107669204,LOC107731383,LOC107699877 coding upstream 33471 8130845 ~ 8154082 (+)
mlst8 mlst8,LOC107699873 coding upstream 72510 8110927 ~ 8115043 (+)
meiob LOC107584223,LOC107669206,LOC107734178,LOC107731419,LOC107594203 coding upstream 76874 8107186 ~ 8110679 (+)
neurl2 neurl2,LOC107669209,LOC107734228,LOC107699858,LOC107594180 coding upstream 82517 8102699 ~ 8105036 (+)
aqp8a.2 aqp8a.2,aqp8,LOC107734187,LOC107692107,LOC107594226,LOC107669187,LOC107731382 coding downstream 1038 8191318 ~ 8193363 (+)
hbbe3 hbbe3,LOC107734188,LOC107669171 coding downstream 11665 8201945 ~ 8202752 (+)
rhbdf1b LOC107734220,LOC107731426,LOC107584114,LOC107692086,LOC107669219,LOC107594190 coding downstream 25286 8215566 ~ 8243257 (+)
ubald1a ubald1a,ubald1,LOC107734217,LOC107669224,LOC107731421,LOC107554033 coding downstream 88788 8279068 ~ 8288769 (+)
LOC122355370 NA coding downstream 102456 8292736 ~ 8303541 (+)
G86460 NA non-coding upstream 127377 8056931 ~ 8060176 (+)
G86374 NA non-coding upstream 340691 7846558 ~ 7846862 (+)
G86268 NA non-coding upstream 463692 7720392 ~ 7723861 (+)
G86283 NA non-coding upstream 468270 7718984 ~ 7719283 (+)
G86275 NA non-coding upstream 485754 7701343 ~ 7701799 (+)
G86540 NA non-coding downstream 7814 8198094 ~ 8198410 (+)
G86536 NA non-coding downstream 13303 8203583 ~ 8204143 (+)
LOC122355856 NA non-coding downstream 13865 8204145 ~ 8206748 (+)
G86577 NA non-coding downstream 101563 8291843 ~ 8292062 (+)
G86593 NA non-coding downstream 154389 8344669 ~ 8344968 (+)
msrb1b msrb1b,LOC100705913 other upstream 80773 8105148 ~ 8106780 (+)
LOC122355675 NA other upstream 343470 7815823 ~ 7844083 (+)
G86143 NA other upstream 879324 7307924 ~ 7308229 (+)
G86142 NA other upstream 882705 7303138 ~ 7304848 (+)
G86029 NA other upstream 1664982 6521829 ~ 6522571 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other downstream 5684 8195964 ~ 8197904 (+)
arsg arsg,LOC107734203,LOC107660857,LOC107692046,LOC107554066 other downstream 646168 8836448 ~ 8852449 (+)
pkd1b LOC107723630,LOC107665861,LOC107556563 other downstream 1095383 9285663 ~ 9306831 (+)
mfsd8 mfsd8,LOC107738985,LOC107556570 other downstream 1466389 9656669 ~ 9664139 (+)
LOC122355274 shisa9a,LOC107584108,LOC107734251,LOC107669237,LOC107554036,LOC107731434,LOC107692077 other downstream 1566967 9757247 ~ 9767228 (+)

Expression


Co-expression Network