slc16a8 (slc16a8,LOC107734169,LOC107690073,LOC107584209)


Basic Information

Item Value
gene id slc16a8
gene name slc16a8,LOC107734169,LOC107690073,LOC107584209
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8606637 ~ 8611224 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254453.1
aataggtagattttttcccccccagtttcaattaataatttaagttaatatcatttttgcattttctgttcgttttgcatttgaaatacGTTCACcacctataaaaaaaattgctgaattCAACAAAATTTTCCGATTACGTAAAATCAGCtgtgtttacaatacaataacTTGTCTTATGGCCAGTTATACCAAATCCACATTCCTTTGGCCTCAGTAAGTGCTCTTACATGACAGCCCCAAAAtctttttgcatgtgtgtgatCTGAATGTGCATtcaaataacagaaaacaattaCCCTCTTTCTTTGGTTCAACAGTAAGATTAGCCAAGAGCTGTAAAACATGTACATGCTGATTTAAGAGGATTTTCATATGGAGTGTGAGTCACGTATTACACGCCTAAGGTAGAAAACTCTGATCTGGCatttttcttgttcttgttcttattattattattattattgttactctttttttgtttttataataataataataataataataaaataaaccaaataaatttttaattataataattgtaccAGTTTTATGGCAAAGTGTTTCTACTATGTAATTTGACTTTTCACAAGTGGACCTGTCAAACCATTTCATTTAATctccaaaacaataaaagaacaaataatgGTTTTCAATACAGAACCAAACTAATTACATCAGTGTGATGgctctgtgttgtttttagaATGAAAGTGCATTGTGCAAGTTGTCATACTgacaaaacaagtaaacaacCAAACAATAATTTCGTAATACACTTGTACTGTCCGGGAATTTCACCTCATTACCTATAAATAAGAGACTTTGTGAGCAGATTAATTACAGATTATTAGCAGGGAGTACAAGGCAAGGAAGGAGGTGCACCAGGAGGTTTATTTAGCAgattatgctttaaaataatttgtgtgtaCAGTGCAATGGGGCTTGGCTGATGACAAGACTTAGTGCCTTATGTGTCTAGATAATATACATTATGTCTATTAAGAAGGCCAGGTAGATCATACAGCTACTTGAAGACATTTTCTGCTGTTTCAAAAGCCAGGTAAGACAATTACTTGTGTTTCAAGTAtcttaaaaacaatcaaataatcGTTCTCAagataatatttatgtttatctgTGACGATTTTAAATCTTCCAGGTAAAAAAGCATCTGGATTTCATTGTTCGTATCCAGTCGGCTTTGTTAATTGTGATATACATATGGCATATTTAGAGTCTATATGGTTatgcaaaactaaaaatttcCAAACTAATTCTATAGCCTCTGTAAAACAATGTAGTGTTATGGACACTAATAGAAAATGAATAGAAAggattttaaatgtgatattatTTGCTCGATACAAAGAAGTGGAGTGAAACTATTATATTAGGTTTATGTCTAGATACTAATCGAAACAGGATATTGATGAATTGCAGTATTGTAAAATTTTAaggttatttaaaactaaaaaggtCCCGGTTATAATCTGTCAGATGTCTGGTTACTTCAAAAGCCAgacattttaaatcagattatattacagtaatgcACAAAAGTAGAGTAAAAGTATCCAACCTTGAATGCATTCCATAATCTTAGTACAAATTATGCATGCTGTGAAATTAATACCATTTGCATGCAATTTATGATGCAACATCCATGCAAGGaaagtccactttagacattctattaacagtaagtaactttccAACTACATGTCAAATAGCAGACAGTATtctgctaaatatttattttattttgaagtgtacACAACATACAATATACTGACTGTGAGAAACTTTCTTCTATTACTAGTTTCTATTACTTTTActctattatatttattgtatatatctTATTGTACCAATCCTAAACCCTAAAACAGTTCTGAAAATTAGTCGACGTGTAGTTGACGTTATGAGAATAGTTATGAGAATATCTGAAGTTTACTGTCAAACGTGTGGTTTTTACCCAGGGACTtcactagataaaaaaaaaaagtatcacttAAGTATTGAGTAGGTTGGCCTATACTTCctgaaactgaataaaaaaacatgtgcCTTGTGCTCAACTCAACTTCCTTTACGAATGTGATGCAGGTTCTTGAGCAGCAGCACATGTTCAGTACAGCGTCAACGGAACAGAAATTGTTAtatctgaacagatttttttgaTTCTGCATATAAGTATATCACATAAAAGCCTTTTATGTCTTCTTTTTTGGAGGCCTGATCAGCTATGGGAATTATTGTCGAGGATCGAGAGATGGTAGGTGCTCCAGATGGTGGCTGGGGCTGGATCGTTCTGCTTGGATGTTTTGTCATCACCGGCTTCTCATATGCCTTCCCGAAAGCTATAAGCGTGTATTTCAAAGAACTGATGAAGGAATTTAACTGTGGATACAGTGAAACCGCCTGGATTTCATCTATAATACTAGCAATGCTATATGGTTCAGGTCCGATCTCCAGCATCATGGTCAATAGATTTGGATGCCGGCCAGTGATGCTGGTTGGAGGATTACTGGCCTCAGGAGGGATGATAATTGCATCTTTCGCTACTAACATAATCCACCTTTATCTCACTGCAGGTGTAATTACagGTCTTGGACTGGCTTTGAACTTCCAACCATCACTGATTATGCTGGGGTCTTATTTTGACAAACGCAGACCACTTGCCAATGGATTGGCAGCAGCTGGAAGCCCTGTATTTCTGTCAGCTCTTTCTCCATTAGGACAACTGCTGCTCGACCACTATGGATGGAGAGGAGGCTTTCTCATAACTGCTGGTCTTCTGCTCAACTGTTGCACCTGTGGAGCAATCATGAGACCCTtgaaatgcaaagaaagaaaagcgaCAGCCTATTCCCAAGAGCTCAAGGAAATGCTGCCTCCTGAGGCTGGACAAGAGAATATCGTTTACgaaaacaataatgataaaaagcCCAGTAAAAAGAAACTTTTGGACTTCAGTGTACTTGCTGACAAAGGGCTTATTATCTATATTATTGCAAAATTTATAGTTGTCCTTGGCCTATTTGTTCCAACTATTCTACTAGTCAACTACGCTAAGGACCAGGGAGTGCTTGACCAGGATGCTGCTTTTTTGTTGTCTATTATAGGATTTATTGACATCTTCGCACGTCCCACTTGTGGCATAGTGGCCGGTTTAAAATGGATCCGACCCAAAATGTCTTATTTCTTTAGCTTGGCTTTGCTCTTCAATGGCCTAACAGATGTATGTTCAGCTACAAACACAGACTACAAAGGGCTAGTTATCTTCTGTGTGTTCTTCGGTCTCTCTTATGGCATGGTGGGTGCTCTGCAGTTTGAAGTGCTGATGGGTATTGTGGGAAAAAGCGGTTTTTCCAGTGCACTTGGCCTAGTGCTCCTTATCGAGGCAGTGGCTGTGCTGATCGGACCTCCCTCTGCTGgttATTTGGTGGATAAGTACAAAAACTATGAACTGATTTTTTACATGGCTGGAGGAGAGTTAATCGCTGCAGGAATATTTCTTGCCCTTGCATCATTCTTCATTATTGGCCgaaagaaacacaaagacacacagcaGAAACATCATGGTGATGTGGCAATcaatcctaaaaaaataaacagtggaGAAAGTTGAAATGTGGGACATTTAAGTTCAATTAATTTTGTATACATGTACATTATTGATATTAGTGTCTTATATTGTGTATATGGTGtgtctgtttaaatgtttctaatttcatataaataacataaagaATTCCACAATCATAATGTGGGTGAATAAGGACTAAA

Function

symbol description
slc16a8 Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Orthologous to human SLC16A8 (solute carrier family 16 member 8).

NR:

description
PREDICTED: monocarboxylate transporter 3-like

GO:      GO:0044765

KEGG:

id description
K08185 SLC16A8; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254453.1 True 3795 mRNA 0.36 4 8606637 8611224

Neighbor

gene id symbol gene type direction distance location
pdap1a pdap1a,LOC107734239,LOC107584100,LOC107690063,LOC107554049,LOC107731397 coding downstream 499 8602210 ~ 8606138 (-)
sh3bp1 sh3bp1,LOC107692101,LOC107731399,LOC107690072,LOC107554025,LOC107734168,LOC107584210 coding downstream 5723 8591741 ~ 8600914 (-)
tnrc6ba LOC107584179,LOC107690060,LOC107692068,LOC107734183,LOC107731400,LOC107554046 coding downstream 36563 8556275 ~ 8570074 (-)
csnk1e csnk1e,LOC107584103,LOC103024972,LOC107731422,LOC107690058,LOC107734231,LOC108431980 coding downstream 50986 8550384 ~ 8555651 (-)
tmem184ba tmem184ba,LOC107690057,LOC107584104,LOC107554044,LOC107731404,LOC107692069 coding downstream 56804 8541219 ~ 8549833 (-)
cby1 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 coding upstream 25 8611249 ~ 8612461 (-)
LOC122355698 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding upstream 23668 8634892 ~ 8636912 (-)
LOC122355697 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding upstream 26187 8637411 ~ 8638883 (-)
kctd17 kctd17,LOC107584096,LOC107734225,LOC107692061 coding upstream 57172 8668396 ~ 8681985 (-)
l3mbtl2 LOC107734235,LOC107584094,LOC107663177,LOC107692058,LOC107709654,LOC107554057 coding upstream 87269 8698493 ~ 8705084 (-)
G86775 NA non-coding downstream 68431 8535973 ~ 8538206 (-)
G86608 NA non-coding downstream 262028 8344336 ~ 8344609 (-)
G86606 NA non-coding downstream 266822 8339456 ~ 8339815 (-)
G86576 NA non-coding downstream 316227 8290080 ~ 8290410 (-)
G86553 NA non-coding downstream 407513 8198918 ~ 8199124 (-)
G86807 NA non-coding upstream 12073 8623297 ~ 8626329 (-)
G86809 LOC107731413,LOC107584098,LOC107734194,LOC107663181 non-coding upstream 15870 8627094 ~ 8630207 (-)
G86825 NA non-coding upstream 64422 8675646 ~ 8747077 (-)
G86826 NA non-coding upstream 68881 8680105 ~ 8744645 (-)
G86848 gna13a,LOC107660858,LOC107584085,LOC107734232,LOC107554062,LOC107692049 non-coding upstream 210656 8821880 ~ 8823436 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other downstream 93372 8511403 ~ 8513265 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other downstream 246645 8334404 ~ 8359992 (-)
G86203 NA other downstream 1217727 7388236 ~ 7388910 (-)
G86108 NA other downstream 1502419 7103880 ~ 7104218 (-)
G86049 LOC101886504,LOC101886427 other downstream 1935390 6670319 ~ 6671247 (-)
plbd1b LOC107578697 other upstream 71219 8682443 ~ 8687548 (-)
trnar-ccu_66 NA other upstream 76274 8687498 ~ 8687570 (-)
LOC122355288 LOC107660874 other upstream 264393 8875617 ~ 8878131 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other upstream 700429 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other upstream 870335 9481559 ~ 9489312 (-)

Expression


Co-expression Network