cby1 (cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074)


Basic Information

Item Value
gene id cby1
gene name cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8611249 ~ 8612461 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254454.1
GCGTTGCTAGGCTCCCCCGGAATTAGCCGTTTGTTTACACATTTCTTTGGCTTTTAGGAACATCGTTGAAGCGGTCGTTAGGAAAAACTAAAGCAGCGTTGGGAGGTCTGACTGTTTACCTCAAAAATGCCCTTGTTTGGCAACATTTTCAGTCCCAAAAAAACACCACCTCGGAAATCTGCATCTCTTTCCAATCTACATACActggATCGGTCAACACGGGAGATTGAATTAGGTCTGGAATATGGATCTCCGGTGATGAATATTGGCGGTCAGAGCTTGAAATTTGAAGATGGCCAGTGGATTTCAGAGTCGGGAGGTAATGTATCAGGAAAAGAGGTACATCGACTGAAGAAAAGGAATCTACAGTTAGAAGAGGAGAATAATCTCCTCAGGCTAAAGATTGAGGTTCTTCTTGATATGCTTTCAGAGTCAACAGCAGAAACACATCTCATACAGAAGGAACTTGAAGATGTGAGGAGTAATTCTCGaagaaagaaatgataaaaggaaattttcttctttttttatctttttacaggtttttttttt

Function

symbol description
cby1 Orthologous to human CBY1 (chibby family member 1, beta catenin antagonist).

NR:

description
protein chibby homolog 1

GO: NA

KEGG:

id description
K23402 CBY1; protein chibby 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254454.1 True 552 mRNA 0.40 5 8611249 8612461

Neighbor

gene id symbol gene type direction distance location
slc16a8 slc16a8,LOC107734169,LOC107690073,LOC107584209 coding downstream 25 8606637 ~ 8611224 (-)
pdap1a pdap1a,LOC107734239,LOC107584100,LOC107690063,LOC107554049,LOC107731397 coding downstream 5111 8602210 ~ 8606138 (-)
sh3bp1 sh3bp1,LOC107692101,LOC107731399,LOC107690072,LOC107554025,LOC107734168,LOC107584210 coding downstream 10335 8591741 ~ 8600914 (-)
tnrc6ba LOC107584179,LOC107690060,LOC107692068,LOC107734183,LOC107731400,LOC107554046 coding downstream 41175 8556275 ~ 8570074 (-)
csnk1e csnk1e,LOC107584103,LOC103024972,LOC107731422,LOC107690058,LOC107734231,LOC108431980 coding downstream 55598 8550384 ~ 8555651 (-)
LOC122355698 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding upstream 22431 8634892 ~ 8636912 (-)
LOC122355697 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding upstream 24950 8637411 ~ 8638883 (-)
kctd17 kctd17,LOC107584096,LOC107734225,LOC107692061 coding upstream 55935 8668396 ~ 8681985 (-)
l3mbtl2 LOC107734235,LOC107584094,LOC107663177,LOC107692058,LOC107709654,LOC107554057 coding upstream 86032 8698493 ~ 8705084 (-)
cbx7b LOC107660863,LOC107734182,LOC107584093,LOC107554058,LOC107692056,LOC107709653 coding upstream 116348 8728809 ~ 8732989 (-)
G86775 NA non-coding downstream 73043 8535973 ~ 8538206 (-)
G86608 NA non-coding downstream 266640 8344336 ~ 8344609 (-)
G86606 NA non-coding downstream 271434 8339456 ~ 8339815 (-)
G86576 NA non-coding downstream 320839 8290080 ~ 8290410 (-)
G86553 NA non-coding downstream 412125 8198918 ~ 8199124 (-)
G86807 NA non-coding upstream 10836 8623297 ~ 8626329 (-)
G86809 LOC107731413,LOC107584098,LOC107734194,LOC107663181 non-coding upstream 14633 8627094 ~ 8630207 (-)
G86825 NA non-coding upstream 63185 8675646 ~ 8747077 (-)
G86826 NA non-coding upstream 67644 8680105 ~ 8744645 (-)
G86848 gna13a,LOC107660858,LOC107584085,LOC107734232,LOC107554062,LOC107692049 non-coding upstream 209419 8821880 ~ 8823436 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other downstream 97984 8511403 ~ 8513265 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other downstream 251257 8334404 ~ 8359992 (-)
G86203 NA other downstream 1222339 7388236 ~ 7388910 (-)
G86108 NA other downstream 1507031 7103880 ~ 7104218 (-)
G86049 LOC101886504,LOC101886427 other downstream 1940002 6670319 ~ 6671247 (-)
plbd1b LOC107578697 other upstream 69982 8682443 ~ 8687548 (-)
trnar-ccu_66 NA other upstream 75037 8687498 ~ 8687570 (-)
LOC122355288 LOC107660874 other upstream 263156 8875617 ~ 8878131 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other upstream 699192 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other upstream 869098 9481559 ~ 9489312 (-)

Expression


Co-expression Network