LOC122355887


Basic Information

Item Value
gene id LOC122355887
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8518980 ~ 8519109 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252259.1
GCACTTCAGCAAACCCTTTCCTTCTGTGTCTGTGCTGGTCATGGGTTAAAAAGTGCTAGAGTAATTCATAGTGTATCCAGACGAGTCTCCTCCTCTATTGGAGCTTGTCTCTACAAACTTTGAAACAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252259.1 True 130 snoRNA 0.43 1 8518980 8519109

Neighbor

gene id symbol gene type direction distance location
LOC122355888 NA coding downstream 615 8518235 ~ 8518365 (-)
LOC122355801 LOC107584107,LOC107734172,LOC107690070,LOC107731391,LOC107554041 coding downstream 3797 8514713 ~ 8515183 (-)
snx29 snx29,LOC107584181,LOC107734208,LOC107690065 coding downstream 7766 8417232 ~ 8511214 (-)
ercc4 ercc4,LOC107734247,LOC107669240,LOC107692079 coding downstream 187441 8325243 ~ 8331539 (-)
mrtfba LOC107734216,LOC107669223,LOC107584111,LOC107692080,LOC107554034 coding downstream 193939 8303767 ~ 8325041 (-)
gspt1 gspt1,LOC107692072,LOC107690055,LOC107734224,LOC107554042 coding upstream 1391 8520500 ~ 8528474 (-)
dmc1 dmc1,LOC107690066 coding upstream 9636 8528745 ~ 8531253 (-)
tomm22 tomm22,LOC107690071,LOC107554024,LOC107734246,LOC107584213,LOC107692102,LOC107731386 coding upstream 12875 8531984 ~ 8534641 (-)
tmem184ba tmem184ba,LOC107690057,LOC107584104,LOC107554044,LOC107731404,LOC107692069 coding upstream 22110 8541219 ~ 8549833 (-)
csnk1e csnk1e,LOC107584103,LOC103024972,LOC107731422,LOC107690058,LOC107734231,LOC108431980 coding upstream 31275 8550384 ~ 8555651 (-)
G86608 NA non-coding downstream 174371 8344336 ~ 8344609 (-)
G86606 NA non-coding downstream 179165 8339456 ~ 8339815 (-)
G86576 NA non-coding downstream 228570 8290080 ~ 8290410 (-)
G86553 NA non-coding downstream 319856 8198918 ~ 8199124 (-)
G86505 LOC107692108,LOC107584217,LOC107734162,LOC107669195,LOC107731388 non-coding downstream 328695 8187641 ~ 8190285 (-)
G86775 NA non-coding upstream 16864 8535973 ~ 8538206 (-)
G86798 NA non-coding upstream 78285 8597394 ~ 8628972 (-)
G86807 NA non-coding upstream 104188 8623297 ~ 8626329 (-)
G86809 LOC107731413,LOC107584098,LOC107734194,LOC107663181 non-coding upstream 107985 8627094 ~ 8630207 (-)
G86825 NA non-coding upstream 156537 8675646 ~ 8747077 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other downstream 5715 8511403 ~ 8513265 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other downstream 158988 8334404 ~ 8359992 (-)
G86203 NA other downstream 1130070 7388236 ~ 7388910 (-)
G86108 NA other downstream 1414762 7103880 ~ 7104218 (-)
G86049 LOC101886504,LOC101886427 other downstream 1847733 6670319 ~ 6671247 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other upstream 91443 8610552 ~ 8612445 (-)
plbd1b LOC107578697 other upstream 163334 8682443 ~ 8687548 (-)
trnar-ccu_66 NA other upstream 168389 8687498 ~ 8687570 (-)
LOC122355288 LOC107660874 other upstream 356508 8875617 ~ 8878131 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other upstream 792544 9311653 ~ 9939849 (-)

Expression


Co-expression Network