Gene
RNA
| Item | Value |
|---|---|
| gene id | G3007 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000000 |
| NCBI id | null |
| chromosome length | 19091038 |
| location | 4726990 ~ 4727351 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU3350 | False | 271 | lncRNA | 0.41 | 1 | 4726990 | 4727260 |
| TU3352 | False | 362 | lncRNA | 0.49 | 1 | 4726990 | 4727351 |
| TU3351 | False | 214 | lncRNA | 0.40 | 1 | 4727047 | 4727260 |
| TU3354 | True | 305 | lncRNA | 0.25 | 1 | 4727047 | 4727351 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000000_04597720_04599733 | NA | coding | downstream | 126821 | 4597518 ~ 4600169 (-) |
| CI01000000_04589952_04595231 | PPID | coding | downstream | 131209 | 4589952 ~ 4595781 (-) |
| CI01000000_04587327_04589208 | NA | coding | downstream | 137782 | 4586959 ~ 4589208 (-) |
| CI01000000_04568874_04570653 | NA | coding | downstream | 155608 | 4568574 ~ 4571382 (-) |
| CI01000000_04121742_04131508 | MMP17B | coding | downstream | 595122 | 4120796 ~ 4131868 (-) |
| CI01000000_04728056_04730605 | NA | coding | upstream | 494 | 4727845 ~ 4730771 (-) |
| CI01000000_04924131_04926561 | NA | coding | upstream | 196707 | 4924058 ~ 4926766 (-) |
| CI01000000_04986976_04998622 | NA | coding | upstream | 259358 | 4986709 ~ 4999019 (-) |
| CI01000000_05286804_05288152 | NA | coding | upstream | 559437 | 5286788 ~ 5288214 (-) |
| CI01000000_05311908_05314253 | NA | coding | upstream | 583390 | 5310741 ~ 5314256 (-) |
| G3006 | NA | non-coding | downstream | 545 | 4725986 ~ 4726445 (-) |
| G3005 | NA | non-coding | downstream | 1528 | 4725251 ~ 4725462 (-) |
| G2937 | NA | non-coding | downstream | 47547 | 4622557 ~ 4679443 (-) |
| G2892 | NA | non-coding | downstream | 178273 | 4545423 ~ 4548717 (-) |
| G2885 | NA | non-coding | downstream | 229283 | 4497276 ~ 4497707 (-) |
| G3012 | NA | non-coding | upstream | 14025 | 4741376 ~ 4741599 (-) |
| G3023 | NA | non-coding | upstream | 69449 | 4796800 ~ 4797046 (-) |
| G3026 | NA | non-coding | upstream | 88323 | 4815674 ~ 4815882 (-) |
| G3034 | NA | non-coding | upstream | 103160 | 4830511 ~ 4830734 (-) |
| G3060 | NA | non-coding | upstream | 156059 | 4883410 ~ 4883632 (-) |
| G2730 | NA | other | downstream | 336838 | 4386383 ~ 4390152 (-) |
| CI01000000_04079738_04081018 | MIF | other | downstream | 645873 | 4078121 ~ 4081117 (-) |
| G2484 | NA | other | downstream | 1153436 | 3570066 ~ 3573554 (-) |
| CI01000000_03564077_03564373 | NA | other | downstream | 1159899 | 3562887 ~ 3567571 (-) |
| CI01000000_03245643_03246684 | NA | other | downstream | 1480275 | 3245134 ~ 3246721 (-) |
| CI01000000_05465020_05466303 | NA | other | upstream | 736707 | 5464058 ~ 5466516 (-) |
| G3650 | NA | other | upstream | 813112 | 5540463 ~ 5540881 (-) |
| G3716 | NA | other | upstream | 1273056 | 6000407 ~ 6000769 (-) |
| G3931 | NA | other | upstream | 1429662 | 6157013 ~ 6403525 (-) |
| CI01000000_10407402_10409508 | UBL3B, UBL3.S, UBL3 | other | upstream | 5676977 | 10407395 ~ 10409950 (-) |
