trnal-aag_43


Basic Information

Item Value
gene id trnal-aag_43
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4056007 ~ 4056088 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1843
ggtagcgtggccgagcggtctaaggtgctggattaaggctccagtctcttggGGGgtgtgggttcgaatcccaccgctgcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1843 True 82 tRNA 0.62 1 4056007 4056088

Neighbor

gene id symbol gene type direction distance location
trnal-uag_28 NA coding downstream 86 4055840 ~ 4055921 (-)
trnal-aag_42 NA coding downstream 1077 4054852 ~ 4054930 (-)
trnal-uag_27 NA coding downstream 1239 4054689 ~ 4054768 (-)
trnal-aag_41 NA coding downstream 2230 4053698 ~ 4053777 (-)
trnal-uag_26 NA coding downstream 2392 4053536 ~ 4053615 (-)
trnal-uag_29 NA coding upstream 923 4057011 ~ 4057090 (-)
trnal-aag_44 NA coding upstream 1090 4057178 ~ 4057259 (-)
trnal-uag_30 NA coding upstream 2092 4058180 ~ 4058259 (-)
trnal-uag_31 NA coding upstream 3244 4059332 ~ 4059413 (-)
trnal-aag_45 NA coding upstream 3408 4059496 ~ 4059575 (-)
G85435 NA non-coding downstream 94654 3960763 ~ 3961353 (-)
G85389 NA non-coding downstream 334984 3615842 ~ 3721023 (-)
G85372 NA non-coding downstream 681056 3373377 ~ 3374951 (-)
G85355 NA non-coding downstream 896264 3156816 ~ 3159743 (-)
G85342 NA non-coding downstream 1018423 2950836 ~ 3037584 (-)
G85487 NA non-coding upstream 61717 4117805 ~ 4175223 (-)
G85511 NA non-coding upstream 119902 4175990 ~ 4176266 (-)
G85515 NA non-coding upstream 127494 4183582 ~ 4188337 (-)
G85541 NA non-coding upstream 211915 4268003 ~ 4269616 (-)
G85545 NA non-coding upstream 219249 4275337 ~ 4284935 (-)
G85366 NA other downstream 756319 3258531 ~ 3299688 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other downstream 952692 3089629 ~ 3103315 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other downstream 1274654 2767908 ~ 2781353 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other downstream 1770955 2173988 ~ 2285052 (-)
ank3b ank3b,LOC107654059,LOC107695539 other downstream 2108595 1814083 ~ 1947412 (-)
kcnh6b LOC107684759,LOC107753307,LOC107573422 other upstream 161316 4217404 ~ 4230039 (-)
LOC122355775 NA other upstream 241779 4297867 ~ 4305215 (-)
trnal-uag_49 NA other upstream 289297 4345385 ~ 4345467 (-)
trnal-uag_50 NA other upstream 291610 4347698 ~ 4347779 (-)
trnal-aag_58 NA other upstream 291774 4347862 ~ 4347942 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnal-aag-121 NA coding NW_023493692.1 JAAXML020000856.1 42423 ~ 42504 (+)