trnap-ugg_11


Basic Information

Item Value
gene id trnap-ugg_11
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4363918 ~ 4363998 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1891
agtagcgtggccgagtggtctaaggcgctggatttgggctccagtctctcaggggcgtgggttcgaatcccaccgctgcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1891 True 81 tRNA 0.63 1 4363918 4363998

Neighbor

gene id symbol gene type direction distance location
LOC122355129 LOC107560557,LOC107753319,LOC107735415,LOC107694068 coding downstream 126689 4232549 ~ 4237229 (-)
dnajc9 dnajc9,LOC107694081,LOC107684784,LOC107751706,LOC107753312 coding downstream 192996 4167639 ~ 4170922 (-)
p4ha1a p4ha1a,LOC107684765,LOC107753313,LOC107751705,LOC107560551 coding downstream 210043 4139060 ~ 4153875 (-)
ppp1r9bb ppp1r9bb,LOC107741705,LOC107684769,LOC107675672,LOC107713069,LOC107598037,LOC107576248 coding downstream 256674 4088710 ~ 4107244 (-)
trnal-uag_48 NA coding downstream 283736 4080101 ~ 4080182 (-)
LOC122355389 grid1b,grid1,LOC106578986,LOC106589364 coding upstream 565815 4929813 ~ 5055115 (-)
ccser2b LOC107716476,LOC107653247,LOC107727960,LOC107569472,LOC107674460 coding upstream 916383 5280381 ~ 5330233 (-)
pelo pelo,LOC107653258,LOC107674509 coding upstream 996366 5360364 ~ 5367143 (-)
emc9 emc9,LOC107716469,LOC107551848,LOC107674563,LOC107727956,LOC107653261 coding upstream 1051901 5415899 ~ 5419866 (-)
ghdc ghdc,LOC107556765,LOC107727961,LOC107716443,LOC107577004 coding upstream 1113524 5477522 ~ 5486280 (-)
G85553 NA non-coding downstream 50870 4312579 ~ 4313048 (-)
G85551 NA non-coding downstream 52014 4311453 ~ 4311904 (-)
G85545 NA non-coding downstream 78983 4275337 ~ 4284935 (-)
G85541 NA non-coding downstream 94302 4268003 ~ 4269616 (-)
G85515 NA non-coding downstream 175581 4183582 ~ 4188337 (-)
G85569 NA non-coding upstream 47342 4411340 ~ 4412200 (-)
G85572 NA non-coding upstream 88757 4452755 ~ 4453276 (-)
G85868 NA non-coding upstream 1363306 5727304 ~ 5731090 (-)
G85889 tgfb1i1 non-coding upstream 1446659 5810657 ~ 5814446 (-)
G85891 NA non-coding upstream 1456351 5820349 ~ 5821178 (-)
trnal-uag_58 NA other downstream 1074 4362763 ~ 4362844 (-)
trnal-uag_57 NA other downstream 4542 4359297 ~ 4359376 (-)
trnal-uag_56 NA other downstream 5706 4358133 ~ 4358212 (-)
trnal-uag_55 NA other downstream 8018 4355820 ~ 4355900 (-)
trnal-uag_54 NA other downstream 9181 4354656 ~ 4354737 (-)
trnal-aag_60 NA other upstream 82 4364080 ~ 4364160 (-)
trnal-uag_59 NA other upstream 2235 4366233 ~ 4366315 (-)
trnal-aag_61 NA other upstream 3567 4367565 ~ 4367644 (-)
trnap-ugg_12 NA other upstream 4567 4368565 ~ 4368644 (-)
trnal-uag_60 NA other upstream 5723 4369721 ~ 4369801 (-)

Expression


Co-expression Network